Trichomycterus rosablanca: 134321891
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Entry
134321891 CDS
T09921
Symbol
thbs2b
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
trn
Trichomycterus rosablanca
Pathway
trn04145
Phagosome
trn04510
Focal adhesion
trn04512
ECM-receptor interaction
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134321891 (thbs2b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134321891 (thbs2b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134321891 (thbs2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134321891 (thbs2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134321891 (thbs2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134321891 (thbs2b)
00536 Glycosaminoglycan binding proteins [BR:
trn00536
]
134321891 (thbs2b)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Phagocytosis
Opsonins
134321891 (thbs2b)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134321891 (thbs2b)
Exosomal proteins of colorectal cancer cells
134321891 (thbs2b)
Exosomal proteins of bladder cancer cells
134321891 (thbs2b)
Glycosaminoglycan binding proteins [BR:
trn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134321891 (thbs2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_CFP_C
TSP1_CCN
Laminin_G_3
TSP1_ADAMTS
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
134321891
NCBI-ProteinID:
XP_062859806
LinkDB
All DBs
Position
10:25788507..25809716
Genome browser
AA seq
1181 aa
AA seq
DB search
MIVRGRHFWLTLLFLCASAIDPDGPLEDITVFDLFERSGITQKTIGVKLFRGPDSESPTY
RFIRFDHLPSVNPKALQQILQQIQNNEGFILTATLRQDRSSRGTLLSLQGPGERRQFEVL
SDGRANTLELVYWWADGSRNVISFEDVELVDSQWKNITLHVHGETATLYVGCNLIDSFIL
DEPFYEHLRAPGGRMFVAKGSSRDTHFRGLLQNVQFIFDTPLEDVLESHGCELINPEELN
TVSESAELVDIPSSIATNVISPNTDPPTASPSEMMCERSCEELANLFQELKGLRVVVSNL
IDGLQKVSEENTAMREALNKMQDPVAQSICWQDGRLFENKEDWIVDSCTKCTCQDGKVIC
RQITCPPVSCASPSFIDGECCPVCLPMDSEDGWSPWSDWTQCTVTCGSGTQQRGRSCDGT
SSTCSGPSIQTRRCSLGKCDRRVRQNGGWSLWSPWSACSVTCGEGVITRIRHCNSPLPQR
GGKDCEGEGRETQSCQAELCPIDGGWGPWSPWASCSATCGGGLKSRERECNSPTPQHGGR
KCMGDSLENEVCNKQECPINGCLSNPCFAAVECNTAVDGSWGCGPCPVGYRGNGTFCEDV
NECDMVSDVCHKVGGVQQCVNTDPGFHCKPCPPRYKGSEPYGIGVESAKTDKQVCEPYNP
CKDNSHSCNKNAECIFLSHVTEPMYKCECRIGYAGDGIVCGEDFDLDGWPNQDLACAANA
TYHCKKDNCPTLPNSGQEDYDNDGQGDACDKDDDNDEIVDERDNCPLMYNPRQYDYDKDA
VGDRCDNCPYEPNPAQTDTDNNGEGDACAVDMDGDEILNEKDNCPLLYNTDQKDTDLDGV
GDQCDNCPLIHNPQQTDRDNDLIGDQCDNNQDIDEDGHQNNLDNCPYVSNANQADHDNDG
KGDACDHDDDNDGIPDDRDNCRLVANPDQLDENGDGRGDACKDDFDNDSIPDIFDVCPEN
NAISVTDLRKFQMVHLDPKGTLQIDPHWVVRNQGKELVQAANSDPGIAVGYDEFNSVDFS
GTFYVNTDRDDDYAGFVFGYQSSRRFYVVMWKQITQTYWEEKPSKAFGISGVSLKVVNST
TGTGEFLRNALWHTGNTKNQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGK
QIMADSGPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDI
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgattgtccgaggacgccacttctggctgacccttttgtttctatgcgcctccgccatc
gacccagatggccctttggaggacataaccgttttcgacttgtttgaaagaagtggaatt
acacaaaagaccattggggtaaagttattccgaggcccagactctgaatccccgacatat
cgcttcatccgatttgaccatcttccctcagtcaaccctaaagctttacagcagattctg
cagcaaatacagaacaatgagggtttcattttgacagcaactttgcgccaggatcgttca
tcccgtggcacccttctctctcttcagggtcctggggaacgcaggcagtttgaggtgctt
tctgatggcagagccaacacacttgaactggtgtactggtgggccgatggctcacgtaat
gtcatctcatttgaggatgttgagttggtagattcgcagtggaaaaacatcacgctgcat
gtacacggtgagacagcgacactgtatgtgggctgtaaccttattgacagcttcatcctt
gatgagcctttctacgagcacctgcgtgctcctggtggacgtatgtttgtggccaaagga
tccagccgtgacactcatttcaggggtctgctgcagaatgtgcaatttatttttgacacc
cctcttgaggatgtcctagagagccatgggtgcgagctaataaacccagaggagctaaat
acagtgagtgagagcgccgaactggtggatataccttcctccattgccactaatgttatt
agcccaaacacggatcctccaacagcaagcccttctgagatgatgtgtgagcgttcgtgt
gaggagttggcaaaccttttccaggagctcaagggcctccgggttgttgtcagcaacctc
attgacggcttgcagaaagtgtcagaggagaacactgccatgcgtgaagcccttaataag
atgcaggacccagtggcacagagcatttgctggcaagatgggcgactgtttgagaataag
gaagactggattgtcgatagctgcaccaaatgcacatgccaagatggaaaagtaatctgt
cgtcagatcacctgccctcctgtgtcatgtgccagtccatccttcattgatggggagtgc
tgtccagtttgccttcctatggacagtgaagatggttggtctccatggtcagactggact
cagtgtacagtaacttgtggcagcggtacgcaacagagaggccgttcttgtgacggcacc
agcagcacatgctctggcccctccatccagacacggaggtgcagcctgggaaaatgtgac
cgcagagttcggcaaaatgggggctggagtctgtggtccccctggtccgcgtgctctgtg
acctgtggggaaggggtgatcactcgcatacgccattgcaactcccctcttcctcagcga
ggtggcaaggactgtgaaggagaaggaagagagacacaaagctgccaggctgagctttgc
ccaattgatggtggctggggcccatggtcaccctgggcaagctgctctgcaacatgtggt
ggtggcctgaaaagtcgtgagagagagtgtaatagccccactccacaacatgggggcaga
aagtgtatgggagattctcttgaaaatgaagtgtgcaacaaacaagaatgccctatcaat
ggctgcctatcaaacccatgctttgctgcagtggagtgcaacactgctgtcgatggttcc
tggggatgcggaccatgtccagtgggctatcgtggcaatggaaccttctgtgaagatgta
aatgagtgtgatatggtgtcggatgtgtgccataaagtgggtggggtgcagcagtgtgtt
aatacagacccaggattccactgtaagccttgtccaccacgatacaaaggttctgagcca
tatggtattggagtggagtcagctaaaacagacaaacaggtttgtgaaccttacaatcca
tgtaaggacaacagccacagctgcaataaaaatgctgagtgtatcttcctcagccacgtc
accgagcccatgtacaagtgtgagtgccgtatcggctatgctggagatggtattgtgtgt
ggagaggactttgaccttgacggttggcctaatcaggatctggcatgtgcagctaatgcc
acataccactgcaaaaaggacaactgccctacccttcccaattctggtcaagaagactat
gacaatgatggacaaggagatgcctgtgataaggatgatgacaatgatgagattgttgat
gaaagggacaactgtccactaatgtacaacccccgacagtatgactatgataaggatgct
gttggtgatcggtgtgataactgcccatatgagcctaaccctgctcagactgacacagac
aacaacggggagggagacgcctgcgctgttgacatggatggagacgaaattctgaatgag
aaagacaactgtccgcttctttacaatactgaccagaaggacacagatttggatggtgtt
ggtgaccagtgtgataactgtccattaattcacaatccacagcagacggatagagataat
gatctaattggagaccagtgtgataacaatcaggacatagatgaggatggtcatcagaac
aacttggataactgtccctacgtttccaatgctaaccaagcagatcatgacaatgatggt
aaaggagatgcctgtgaccatgatgatgacaatgatggaattcctgatgatcgggacaac
tgcaggctggtggctaatccagatcagctggatgaaaatggtgatggtcgtggtgatgcc
tgtaaggacgactttgacaacgacagcattcctgacatcttcgatgtatgccctgagaac
aatgccatcagtgtcacagatttaagaaagtttcagatggtgcacctggatccgaaggga
acccttcagattgacccccactgggtagtgcgcaaccagggcaaagaactggtacaggct
gctaactctgaccctggcattgcagtgggttatgatgaatttaattccgtggatttcagc
ggaaccttctatgtaaacactgaccgggatgatgattatgcaggctttgtgtttggctat
cagtccagtcgacgcttctatgtggtgatgtggaaacagataacacagacttattgggag
gagaagccttctaaggccttcggtatctctggtgtgtccctaaaagtagtcaactccact
acaggcacaggagagttcctgcgcaatgccctttggcacacaggcaacactaagaatcag
gtgcgaactctttggcatgatccgaaaaacatcggctggaaggactacactgcttaccgt
tggcaccttattcacagacccaaaacaggtttcattagggttgtagtgtacgagggaaag
cagatcatggcagattctggccccgtctatgacaagacattcgctggtggaagactaggg
ttgtttgtcttttctcaagagctcgtcttcttttctgacctcaaatatgaatgcagagac
atctga
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integrated database retrieval system
