Trichomycterus rosablanca: 134321966
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Entry
134321966 CDS
T09921
Symbol
caprin2
Name
(RefSeq) LOW QUALITY PROTEIN: caprin-2
KO
K18744
caprin-2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134321966 (caprin2)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
134321966 (caprin2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
XFP_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
134321966
NCBI-ProteinID:
XP_062859893
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All DBs
Position
1:complement(48921508..48936894)
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AA seq
946 aa
AA seq
DB search
MVQLQSSPASEVVDLHVESIEERDASHDDSSGIDSPNAFTALQLTLNPSAFIYHGYETYI
EDGLICLRHKIRNIEKKKLKLECYKMRLESGEKLNQDQMDAVERYEEVIHNLKFAKELQK
TISALTQDLLRGQRKAVCNEQVQRLEAEQKRLSVMLQMQYVLLSLQRQDVRKNFCNSQEY
AGYLSSQELENLLDLASLVGCKRNDILSLEVQMERASLVYLDLLDGKNKPVAGSTYKCLK
EKLLRLVDCGFFDHLPDPQNDLQNINTKLDSSSRPSTLPAEVSLNLNKLALKEFLNRRYI
PEADLVGRVQGKEEMPVPNWKAEFLALKEREPPDSWDLDFSETPVSSQAGLYKPWKGAAG
FIPKTITKKPTVELKQKQQKKNKGQGSKSDIEMLVPVEVNSPTSLAKDPALRRRQLDHLM
DQITGSFSFMQDSLLDGDVSPTRVSNKGLPLSPSPSPIAQKEQKKIPADILPQTQHSTPI
NTSILAGVGKNCLTSSNQTLNSSDLDLHNGDTPLAKQDKDFTSSPLYRRESVISLSLDKN
TEQTKKQSLCNAEIPTSMPAQTFSTPPSRRSLPVTGTSSFSNMHSVFSGEVPISKSDELK
VDESGFLGSVCLSYNTADTLSYCTVSTQTPPELSLPLDDLQMESAYLSESDLSATSQVYS
PGQSSALHAQSTLIQHYYPRSTIRGIXHSGSGLSXLCLLVSFLLISPQVAQGGYEVHRVN
VHAPGGGFINPEPGSVFYTSQENGYQLKHKHSGGTAARRNGSTAGWSDSSQVSSPDREAT
YLVDSAHGDSLPVSATGMPLTGPPPHTLMPVYSQVRVAFSAARATNLAPGTLDQPIAFDL
LHSNQGNAFDATSGHFICPAAGTYVFFFHILKLAISVPLYINLMRNDEVVASAYANDGAP
DHETASNHALLSLRLGDHVWLRLHRGAIYGSSWKYSTFSGFLLYPD
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcttcaatcgtctccagcttctgaagttgtggatctccatgtggagtccatt
gaggaaagggatgccagtcatgacgacagctcagggattgactctcctaatgccttcaca
gcacttcaactcaccctaaacccttcagcgtttatataccatggttatgagacctacatt
gaggatggccttatctgcctcagacacaaaattcgcaacatcgagaaaaagaagctgaaa
ctggaatgctataaaatgcggcttgagagtggggagaagctaaatcaagaccaaatggat
gcagtagagaggtatgaagaagtgatccacaacctgaagtttgccaaagagctgcaaaag
accatttctgctcttacacaggatctgttaaggggtcagaggaaagctgtgtgtaacgag
caggttcagaggctggaggctgagcaaaagcgactgagtgtgatgcttcagatgcagtac
gtcctcctcagtctgcaaaggcaagacgtcaggaagaacttctgcaactcgcaggaatac
gctggctacctgtcctctcaggaacttgagaacttgttggacctggcttcattagttggc
tgcaaaaggaatgacatcctgagtttagaagttcagatggagcgggcctctcttgtctat
ctggacctgctggatgggaaaaacaaaccagttgctggctcaacatataagtgcctgaaa
gagaagctgctgagactggtggactgtggtttcttcgatcaccttccagatcctcaaaat
gacttgcagaatatcaacacaaagcttgactcctcatctagaccaagcaccctacctgca
gaggtcagtttgaatttgaataagctggctctgaaagagtttctaaacagacgctacata
cctgaagcagacctcgttgggcgtgtacagggtaaggaagaaatgcctgtaccgaactgg
aaagctgaatttttggcgctaaaggagcgagaacctccagactcttgggatttggacttt
tctgagactccagtgtcctctcaggcagggttatacaagccttggaaaggggcagcaggg
tttatacctaaaacaatcactaagaagcccactgttgagctcaaacagaaacagcagaag
aaaaataaaggtcagggctccaaatctgatattgagatgcttgtgccagtagaggtaaac
tctccaacctctctggctaaagatcctgcactacgtagacggcagttggatcaccttatg
gatcaaatcacaggttccttcagcttcatgcaggattctttgctggatggagacgtctct
ccaactcgtgtctcgaacaaagggcttcccctttcccctagcccatctcctattgcccaa
aaagaacagaagaaaatccctgctgacatcctgcctcagacacagcattcaactcccatt
aatactagtatacttgctggagttggtaaaaactgtctgaccagtagtaatcagactctc
aattcgtcggacctggacctacacaatggagacacacctctggcaaagcaagataaggac
ttcacttcctcacctctgtaccgccgagagtcggtcatctctttgtctcttgataagaac
actgagcagacaaaaaagcagtccctttgtaatgctgagattccaacgagcatgccagca
cagaccttctccactccacccagcaggagatctcttcctgtaaccggcacatcttccttc
agcaacatgcactctgtgttcagtggggaagtacctataagcaagagtgatgagctaaag
gtggacgaaagtggatttttaggatctgtgtgtctgagctacaatactgcagacacactg
agctactgtactgttagtacacaaacccctcctgaactcagcctgcctctagatgacctg
cagatggaaagtgcctacctgtccgagagtgacctcagtgctaccagtcaggtttattct
cctggtcagagttctgcccttcatgctcagtctactctaatccagcattattatccacgc
agcacaatcagaggtatctaacatagtggcagtgggctctcctgactttgtttacttgtc
tccttccttcttatttcacctcaagttgcccaaggtggttatgaggtgcacagagtaaat
gtacatgctcctggaggaggcttcataaatcctgaacctggatctgttttttatacctcc
caggaaaatgggtatcagctgaaacacaaacattctggagggacagcagctcgaagaaat
ggctccactgctggttggagtgactcctcccaggtgagcagtccagaccgggaggcaact
taccttgtggattcagcccatggggattctttacctgtttcagctactgggatgcccctc
actggacctccccctcacacacttatgccagtctactctcaagtgcgtgtggccttctca
gctgctcgagccaccaacctcgctcctggcactctggaccaaccaatcgcctttgatctg
cttcatagcaaccagggcaatgcttttgatgcaacctctggccacttcatctgtccagcc
gcaggcacttatgtcttctttttccacatcctcaagctggccatcagtgttccgctatac
atcaacctgatgcgcaatgacgaggtagtggcatcggcatatgccaacgatggtgcgccc
gaccatgaaacggccagcaatcacgccctgctgtctctgcgtcttggcgaccatgtgtgg
ctccgtctccaccgtggtgccatctatggtagcagctggaagtacagcactttctctggc
ttcctgctttacccagactga
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