KEGG   Trichomycterus rosablanca: 134322708
Entry
134322708         CDS       T09921                                 
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
  KO
K14791  periodic tryptophan protein 1
Organism
trn  Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:trn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:trn03009]
    134322708 (pwp1)
Ribosome biogenesis [BR:trn03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    134322708 (pwp1)
  Pre-60S particles
   Other pre-60S particles
    134322708 (pwp1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40 Beta-prop_EML_2 Beta-prop_RIG_2nd EIF3I Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_WDR41 WDR55 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD_LRWD1 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_ACSF4 Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_SPT8 DUF4354 WDR54
Other DBs
NCBI-GeneID: 134322708
NCBI-ProteinID: XP_062860149
LinkDB
Position
1:complement(53344573..53386977)
AA seq 471 aa
MSSQITCVGWVRRGVSKEVPDKVELSKEELQRIISEANYELSDDDDESMVTDQEKDSFSA
AEINTKEKQSGDDLSEYNLDTYDDHDIETANLGDSLAGLAVFGSNDEDPHITIKDTDQYE
REDFQIKPTDNLILAGRAEKDCCNLEIYVYNSEEDSLYVHHDLLLPAYPLSIEWLNFDPN
PEEGAGNYAAVGNMTPVIDVWDLDVVDCLEPVFSLGSKKSKKKKSKKTSDSVEGHTDAVL
DLSWNKLVRNVLGSASSDESVILWDLVHGKPATTLKQHTDKVQTIKFHPFEAQTLITGSY
DKSAILYDCRNPESSHRVWRFSGQVERVVWNHFSPCNFLVSTEDGFIYCLDARTDKLIFT
LRAHDGEVSGLDLSSQISGCLVTCSADKHVKIWDIQGNKPNLIYSRDMKMGVMFCAACCP
DMPFVYAFGGQRDGLRLWDISDVAAVAEVFSRSSGASKTSANSQMFSDNKI
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgagctcccaaattacttgtgttgggtgggtgaggaggggcgtttctaaggaagttcca
gataaagtagaacttagcaaggaggagctgcagcggatcatatctgaggcaaattacgaa
ttaagtgatgatgatgatgagagcatggtaactgaccaggaaaaagactcattttcagcc
gccgaaataaatacaaaagaaaaacagtcaggagatgatctttctgagtataacctggat
acatatgatgatcatgacattgagacggctaaccttggggacagtttggcaggcctggct
gtgtttggcagtaatgatgaagatccacatattacaattaaagacactgaccaatatgaa
agagaagattttcaaatcaagcctactgataatcttattcttgctggtagggctgagaag
gattgctgcaacctggagatttatgtatacaactctgaggaggactctctgtatgttcac
catgacctactcctgcctgcctatccactaagcatagagtggctaaactttgatcctaac
cctgaggaaggagcagggaattatgcagctgtaggaaacatgactcctgttattgatgtg
tgggatttggatgtggtggattgcctagaacctgtcttttcactgggcagcaaaaagtcc
aaaaagaagaaaagcaagaagacttctgattctgtagagggtcacactgatgcagtattg
gatttatcatggaacaaactggttagaaatgttttgggcagtgcttcatctgacgagagt
gtgattctttgggatttagtgcacggcaagccagcaacaacattaaaacagcacacagat
aaggtccaaaccataaaattccatccatttgaagcccagactctcatcactgggtcttat
gataaatctgccattttatatgactgtcgaaatcctgaatccagtcatcgtgtctggcgg
ttcagcggtcaggtggagcgtgttgtgtggaatcacttctccccctgcaactttcttgta
agtacagaagatggatttatttactgtttagacgcacggacagacaaactgatcttcact
ttgagggcacatgatggagaggtgtcaggtttagacttaagcagtcagatcagtggctgt
ctggttacatgctctgctgacaaacatgtgaaaatttgggacatccagggaaacaaaccc
aacctgatttactccagggatatgaaaatgggtgtgatgttctgtgcagcctgctgtcct
gacatgccatttgtttatgcatttggcggacaaagggatgggctgcgtttatgggacatt
agtgatgtagcagctgtggcagaggttttcagcagaagttcgggtgccagcaagacttca
gctaactcacagatgttttctgacaacaaaatttga

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