Trichomycterus rosablanca: 134322817
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Entry
134322817 CDS
T09921
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
trn
Trichomycterus rosablanca
Pathway
trn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134322817 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134322817 (nup93)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134322817 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TarH
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
134322817
NCBI-ProteinID:
XP_062860240
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Position
11:complement(31331803..31374604)
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AA seq
820 aa
AA seq
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MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDADIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSEVGAPGRSALDS
VEVAYGRQIYSFNEKIVNGHVQPNLGDLCASVGDGLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTAVKMQMAFVQQALSFLENSYKKYTMVTVFGNLHQAQLGGVPGTYQLVHSFLNI
KLPGPMPGMQDGEVEGHPVWALIYYCLRCGDLAAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPATENKVRLHYRRVLRNSADPYKRAVYCLIGKCDVTDNHSEVADKTEDYLWLKLN
QVCFDEDSSSAPQDRLSLTQLQKQLLEDYGESHFSAGQQPFLYFQVLFLTAQFEAAIAFL
FRMERLRSHAVHVALVLHELKLLLKSSGQSAQLLSREPGDPPMVRRLNFIRLLMLYTRKF
EATDPREALQYFYFLRNEKDNQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
RFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNPDKVLELINKLLSPVVSQVSAPQSN
KERLKNMALGIAERYRANSIAGEKSVDGTFYLLLDLMTFFDEYHAGHIDRAYDVIEKLKL
VPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGVAAGTPGRQQRTLE
DRDSLLRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagagggcttcggtgaactgctgcagcaagccgagcagctggcagctgagact
gaggccgtgtctgagctgccccatgttgaacggaatctacaggagattcagcaggctggg
gagaggttacgatcccgcaccttgacccggacctctcaggatacagctgatgtaaaagca
tctattctcctgggctccagaggactggacatctttcacatctcccagcgcctggaaagc
ttgagtgcagccacaacattcgaaccactggaaccagtaaaggatgccgacatccagggc
tttctgaagaatgagagagacaatgcactgctgtccgccatcgaggagtctcggcgcagg
accttcctgctggcagaggaatatcaccgcgagtccatgttggtacagtgggagcaggtg
aagcagagagtgctgcacaccctgctgggagctggagaggatgcactggacttcagccag
gatgtggagccgagctttgtaagtgaagtgggggctcctggacgcagcgctctggacagt
gttgaggtggcctatggcagacagatctacagcttcaatgagaagatcgtaaacggacat
gtacagcccaacctgggagatctgtgtgcatcagtgggtgatggtctggatgataagaac
gtttccgacatgtggttgatggtgaagcagatgacagacgtgctccttgtcccagccaaa
gacactctgaagagtcgcactgctgtgaagatgcagatggcttttgtccaacaggcactg
agcttcctggagaacagctataagaaatacaccatggtaacagtttttgggaacctacat
caagctcagctgggtggagtccctggcacttatcagctggtacacagctttctcaacatc
aaactgcccggcccaatgccaggcatgcaggatggcgaggtggagggtcacccagtgtgg
gctctgatctattactgcctgcgatgtggagatctggctgcagccatgcaggtggtgaac
cgagcccagcaccagctgggagacttcaagacctggtttcaggagtacatgaacagtcct
gaccgtcgtctggctccggctacagagaataaagtgcggctgcattacagacgagtgttg
cgcaacagtgctgacccttacaaacgtgctgtgtactgcctcatcggcaagtgtgacgtc
actgacaaccacagcgaggtggctgataaaaccgaggactatttgtggcttaagctgaac
caggtgtgttttgatgaagacagcagcagtgctccacaagacaggctttctctaactcag
ctccagaaacagctcctagaggattacggcgagtctcatttttccgccggtcagcagccg
ttcctgtactttcaggtgctttttctgaccgcgcagtttgaggctgccatagcattcctc
ttccgcatggagcgtctgcgcagtcacgccgtgcacgttgccctcgtcctccatgaacta
aaactactgctaaaatcatcaggacagagcgctcagctactgagtcgggaaccgggagac
cccccaatggtgcgtcgtctgaacttcattcgccttctcatgctctacactcgaaaattt
gaggccacagacccacgagaggccctgcagtacttctacttccttcggaacgagaaagac
aaccaaggagagaacatgttcatgcgttgcgtcagtgagctggtcattgagagtcgagag
tttgacatgcttctaggaagactggaaaaagatggaagcaggaagccgggggtgattgac
aggtttgccggagacacacgagccatcattaccaaagtggcctcagaggcggagaacaag
ggcctgtttgaggaagctgtcaagctgtatgagctagccaagaaccctgataaggtgctg
gagcttataaataagttgctgagtccagtagtctcacaggtcagcgcaccacagtcaaat
aaagagcgactcaaaaacatggcgctgggcattgctgaacggtaccgtgcaaatagtata
gccggagagaagtctgtagacggcaccttctacctgctgctggacctcatgaccttcttc
gatgagtaccatgcaggccacattgaccgggcgtacgacgtgatcgagaagctgaaactg
gttcctttaagccaggacagtgtagaagagagggtggcagcgttccgaaacttcagtgat
gaggtcagacacaatttatccgaggtgcttcttgccaccatgaacattctgttcacacag
tacaagcgtttaaagggggtggcggcaggtactccgggtagacagcagcgcacgttggaa
gaccgagactcgctactgcgcagccaggcccgagcactgatcacttttgctggaatgatc
ccataccgcatggcaggagacaccaatgccagactggtacagatggaagtcctgatgaac
tga
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