Trichomycterus rosablanca: 134322841
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Entry
134322841 CDS
T09921
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134322841 (ppfibp1b)
Membrane trafficking [BR:
trn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134322841 (ppfibp1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
ATG16
Phage_portal_2
DUF16
Filament
FxsA
Motif
Other DBs
NCBI-GeneID:
134322841
NCBI-ProteinID:
XP_062860273
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All DBs
Position
11:32791404..32823317
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AA seq
1017 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKSIDYSNGIFDCQSPTSPFIGGLRALHLIEDLRGVLE
LMDTEEREGLRCQIPDSTAHSLVEWLQGHLSNGHNGHISLTGDIYQDRLNRLESDKESLV
LQVSVLTDQVEVQGEKIRDLDLCLEEHRDKLNTTEEMLQQELICRSALETQKLELMSEIS
NLRLKLNAFEKERKDFDNRFSDSEGLILEINELRYRISEMETERLQYEKKLKSTKSLMAK
LSSLKIETSQLQYEKQRKDHKIEALKEELAALGRQLDGKDGELRRLQDETGSRSPTPAGL
ESTERVFSAEETFKQKLKEKHLEVQRMKKAVESLMAANEEKDRKIEELRQSLMHYKKVQD
MVMLVQGIKAKDGESDESHSDSSLSMSTALSLSMDTEKSLLACVKEAQNQDEPTTFVSML
HVPLLSPSTQVKLETDVDLDQVPSQSDSGHQEQNQAQEPLIDTDLESVEVPKSGSQSKLD
GSPSEMRTLAVVQSPAESRAFDEFNKITTLPPKVPTASSRTTEDEPFGTRKARSSFGRGF
FKLKSNKRTASAPNLAETERDGTDHLDLAGMPQKSANSDSSNTLSTCLEGKKKSKGIKAF
LGKLTRSQSTTFSLDDSLSENEFKRGGVRATAGPRLGWSRDLHNTNSEVDAPFARWSREQ
VCDWMQEQGLGLYANLARQWISSGQTLLQASTHDLEKELGIKHPLHRKKLQLALQALGSE
EDDNKGKLDYHWVTRWLDDIGLPQYKTQFDEARVDGRMLHYMTVDDLLSLKVGSVLHHLS
IKRAIQVLRLNNYEPNCLRRRPSDENNISPAEISQWTNHRVMEWLRSVDLAEYAPNLRGS
GVHGGLMVLEPRFNTETMALLLNIPPNKTLLRRHLATHFNLLVGSEAQQLKQEWMENPDY
ILLTATAKVKPRKSFGNFGTLRKKKQEDSEEYVCPMDVEMPKGRSFQKGYRGMDLHIYED
ELDRLDQLEDSEGTVRQIGAFSEGINNLTSMLKEDEFFKEMSTSSPNPSTTDDDSTV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagcgatatgttggcagctgccttggagcaaatggatggcatcata
gcaggctcaaagtcaatcgactactcaaatggaatctttgactgccagtctccaacctca
ccgttcattggaggcctgcgggcactgcacctaatcgaggatctgcggggggttctggag
ctcatggacacggaggaaagagagggactgcgctgccagatacccgactctactgcacac
agcctggtagagtggctgcagggccacctgtcaaatgggcacaacgggcacatttctctg
actggtgacatttaccaggacagacttaatcgtcttgaaagtgacaaggaatctcttgtt
ctacaggtgagcgtcttgacagaccaagtcgaggttcaaggagaaaagataagagaccta
gacttgtgccttgaggaacaccgtgacaaattaaataccactgaggaaatgttacagcag
gagctgatctgcaggtcggctcttgagacacaaaaactggagctgatgtctgagatttct
aatctaaggctaaagctgaatgcctttgaaaaagagagaaaagactttgataacagattc
agcgatagtgagggtttgatcttggaaattaacgagctaaggtaccgcatttctgagatg
gaaactgaacggctgcagtatgagaagaaattaaaatccactaagtcgcttatggcaaag
ctatctagcctgaaaatcgaaaccagccagttgcagtatgaaaaacaaaggaaggaccac
aaaatcgaggcactcaaggaagagctggctgcattaggaaggcagctggatggtaaagat
ggagaactaaggaggttacaagatgaaacagggtctagatcaccaacacctgcaggcttg
gaatctactgagagagttttcagtgcagaagaaacttttaaacagaagctgaaagagaaa
catttggaagtgcagagaatgaagaaagcagtcgagtcactaatggcagccaatgaggaa
aaggatcgcaagattgaggagcttcgacagtcactaatgcactacaagaaggtgcaggac
atggtcatgttggtgcagggaataaaagcaaaagacggagaaagtgacgagagccacagt
gacagctccctgtccatgtctactgcattgtcgctttcgatggatacagagaagtctctt
cttgcttgtgttaaggaagcacagaatcaggatgagccaacgacatttgtcagtatgctg
catgtgcccttgctctcaccatcaacacaagtcaagctagagactgatgtagatctggat
caagtgccttcccagagtgattcagggcatcaggagcaaaaccaggcacaggagcctttg
atcgataccgatctggaaagtgtggaggtccccaagtctggcagccagagtaaactggat
ggcagccctagtgaaatgagaactttagcagttgtgcagagtccagcagaaagtcgtgct
tttgatgaattcaacaaaattacaaccttaccacccaaggtccccactgccagttctcgt
accacagaggatgaaccttttgggacaaggaaagctagatcctcctttggaagaggcttt
ttcaagctcaaaagcaacaaaagaacagccagtgctccaaatcttgctgagactgagcga
gacggaaccgatcacctggatcttgcggggatgccacaaaagtcagctaacagtgacagc
tcaaacacgttgtccacctgcctcgagggaaagaagaagtcaaaaggaattaaagcattc
ttagggaagcttacaagaagtcagtccaccacattcagcttagatgacagcctttcagaa
aatgagtttaaacgaggaggagtccgagccacagctgggcccaggctgggctggtcacgg
gatctgcacaacaccaacagtgaggtggatgctccgtttgcacggtggtccagggagcag
gtatgtgattggatgcaggagcagggactgggtttgtatgcaaacctagccagacagtgg
atttcttcaggacagactctgctacaggcatctacacatgatctggaaaaggagctgggg
atcaagcaccctctccacagaaagaaacttcaactggccctacaagcactgggctctgag
gaggatgataacaaagggaaacttgactaccactgggtaacaaggtggcttgatgacatc
gggcttcctcagtacaaaactcagttcgatgaagccagagtggacggcagaatgcttcac
tacatgactgtggatgatctgttgtctttgaaagtgggcagtgtgctccatcacctcagc
attaaaagagcgattcaagtgcttcgcctcaacaactacgagcctaactgcctgcgacgc
agaccatcagatgagaacaacatcagcccggctgagatttctcagtggaccaatcaccgt
gtgatggagtggctgcgttctgtagatctggcagaatacgcaccaaatctgaggggtagc
ggagtccatggaggactgatggttctcgagccccgctttaacactgagaccatggctctg
ctccttaacattcctcccaataaaaccctgctccggaggcacctggctactcattttaac
ctgttagtgggttctgaagctcagcagctgaagcaagagtggatggagaatcctgactac
atcttacttactgcaaccgcaaaggtcaagccacgaaagtcatttggaaactttgggacc
ctgaggaagaagaagcaggaggatagtgaagagtatgtgtgccccatggatgtggagatg
cccaaaggacgcagctttcagaagggctacagaggcatggatttacacatctacgaggac
gagctagatcggttggatcagttggaggactctgaaggcaccgtgcgacagatcggtgct
ttttcagagggcatcaacaacttaacgagcatgctgaaagaggacgagttttttaaggag
atgtctacgtcgtcccctaaccccagcacgactgatgacgactcaaccgtttga
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