Trichomycterus rosablanca: 134322880
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Entry
134322880 CDS
T09921
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28 isoform X1
KO
K14573
nucleolar protein 4
Organism
trn
Trichomycterus rosablanca
Pathway
trn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134322880 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134322880 (rbm28)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
134322880 (rbm28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
SPX
BUD22
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
134322880
NCBI-ProteinID:
XP_062860353
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All DBs
Position
11:complement(36517332..36529991)
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AA seq
799 aa
AA seq
DB search
MSAVTLFVRNLPTSASNQQLEEIFSEIGPVKRCFVVKDKGSEKCRGIGYVTYSMAEDAQR
AIQDIKHYDGKKISVIQAKKKINDRKKGKAEKAEKEAEKPPDSKPQQKSQGMRKKKLKAK
LIVRNLSFKCSEEELKQIFSKYGTVLEANIPLKPDGKKRGFAFVQFKNMLEAGKALAATN
LKEIKDRKVAVDWAVSKDKFLANQSGLAAGSKKDERTNATEADEETDEEESPEEHESGTN
SQSEEEEDDDDDDGDDGDDEEDKESQEADSDSSLSASDEDDDDEDDDDEDDDDGDVSDED
TDKKNKAKKKQNLLPSDVNEGKTLFIRNLSFDSEEEGLEEVLLQFGELRYVRVVVHPETG
LPKGCAFAQFKSKEAAEKCLAAAQDESETGGVRVDGRKLNIMLAVSKEDAVKLKTKEVKT
HKGSRNLYLAREGLIRAGTKAAEGVSDSDMAKRTRFEELKRAKLKNVNVFVSRTRLCIHN
LPKSVDRSRLSKLCLTAAGGDKRVRIKECHVMYDRKPVRGEPMGHSLGYGFVEFQDHEHA
LQALRRLNNNPTIFGAIKRPIVEFSLEDGRKLKLKAMRLEKSKVKTVAKSGGEKVLGSIL
RWSSPGPFCVEFACSPCVCVGFLRELRFPPTVQRRKQVNKNSNQKEGNSESQQKSPKKNK
AAVQQPNRSGNSSEQTPSGHYSGFRTTPEVEHVELQDGKKRQKVLPMPSHKGPKIRQRDK
GKQLVPAKKIKTVPSRKEKKIVSMEKPNQNKKQGAKPVKRKFQSKEDDHFERLVEQYKKK
LTGGSNSNNMVIKKTKWFS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagtgactttatttgtgcggaatttaccgacttctgcatctaatcaacaactg
gaggaaatattttctgaaatcggacccgtaaaacgctgctttgtggtgaaagataaagga
tcagaaaaatgccgtggaataggatatgtcacatactcgatggcagaggacgcacagcga
gccattcaagacataaagcattacgatggaaaaaaaatatctgtcattcaggccaagaag
aaaatcaatgatagaaagaaaggaaaagctgaaaaagctgagaaagaagctgagaaacca
ccagattcaaagcctcaacagaaatcacaaggcatgaggaagaaaaagttgaaagccaag
ctcattgttagaaatctcagttttaaatgctcagaagaggagctgaagcaaatcttctca
aaatacgggactgttctggaagctaacatccctttaaaaccagacggaaagaaacgaggc
ttcgcatttgtccagtttaaaaacatgcttgaggcaggaaaagcactcgccgccaccaac
ctaaaagaaattaaagacagaaaggtagctgtagactgggctgtctcaaaggataagttc
ttggccaaccagtcaggattggctgcaggaagtaaaaaagatgaaagaacgaatgcaact
gaggccgatgaggagacggatgaagaagagtctccagaggaacatgaatctggcaccaac
tcacagtcggaggaggaggaggacgacgacgatgatgatggtgacgatggcgacgatgaa
gaagataaggaatctcaagaagcagacagtgatagcagcttgtctgcatcagacgaggat
gacgacgatgaggatgacgacgatgaggatgacgacgatggcgatgttagtgacgaggac
acggataagaagaataaagctaaaaagaaacaaaacttacttccttcagatgtgaatgag
ggaaaaactttatttatcagaaacctgtcttttgattcagaagaggaaggattagaggaa
gttctcctgcagtttggtgaacttagatatgtgcgtgttgtggttcatcctgagacgggc
ctccccaaaggttgtgcttttgctcagtttaaatcaaaagaagcagcggagaaatgtcta
gcagcagcacaggatgaatcggaaaccggaggtgtgagggtggatggaaggaagctgaat
atcatgttggcagtaagcaaagaagatgcagtcaaactcaagaccaaggaagtaaaaacc
cataaaggttccaggaacctttaccttgccagagaaggattgattcgagctggaaccaag
gcagcagaaggagtctccgactctgatatggccaagaggacaaggtttgaagaactaaag
agggcaaagctgaagaacgtcaacgtgtttgtgtctcgaacgcgactgtgcattcataac
ctgccgaagagcgtagatcgctcccgtctttctaaactgtgcctgactgctgcgggggga
gacaagcgggtccgcatcaaggagtgtcacgtgatgtatgacaggaagcctgtacgcggt
gagcccatgggtcattcactcgggtacggctttgtggagtttcaggatcacgagcatgcc
cttcaagccctgcgtcgcctaaacaacaatccgaccatctttggtgccatcaagagaccc
atcgtggagttctcactggaggatgggaggaagttaaagttgaaggcaatgagactggag
aagagcaaagtgaaaactgttgctaaatctggaggtgaaaaggtcctgggttcgattctc
aggtggagcagtccgggtcctttctgtgtggagtttgcatgttctccctgtgtctgtgtg
ggtttcctccgggagctccggtttcctcccacagtacaaagacgtaaacaagtgaataag
aacagcaatcagaaggaaggaaactcagagtctcagcagaaatctcctaaaaagaataaa
gctgcagttcagcagcccaacagatctggcaacagcagtgaacaaacgccaagcggccat
tactcaggcttcaggaccacaccagaagtggagcatgtggagctgcaggatggcaaaaaa
cgccaaaaggttcttcccatgccctcacacaaaggtcctaaaatcaggcaacgggataaa
ggaaagcagttggtcccggccaagaaaataaagacggtacccagcaggaaggagaaaaaa
atcgtctctatggagaagccaaaccaaaataagaaacagggtgccaaaccagtcaagaga
aagttccagagtaaagaggacgatcactttgagcgcctggttgagcagtacaagaagaaa
cttaccggcggttcgaactctaataacatggtcatcaaaaagactaaatggttcagttga
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