Trichomycterus rosablanca: 134322907
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Entry
134322907 CDS
T09921
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134322907 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134322907 (dhx36)
03012 Translation factors [BR:
trn03012
]
134322907 (dhx36)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134322907 (dhx36)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134322907 (dhx36)
Translation factors [BR:
trn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134322907 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
ATPase
nSTAND3
AAA_16
AAA_19
Motif
Other DBs
NCBI-GeneID:
134322907
NCBI-ProteinID:
XP_062860390
LinkDB
All DBs
Position
11:39708339..39736853
Genome browser
AA seq
1025 aa
AA seq
DB search
MSYGYGGGRGRGRGRGWRSGEERWGSGWEQRDEGAGGSGGGGGGGGGGGRGKHPPHLKGR
EIGLWYAKHGGARRAEAERKSRAVVQMDESREQHITRLLNSVQSDPSRGHAPSAPPYRPA
RREPNTHSYFDGDEPTDEQQKTSSVTETKPKPKVKDEEEEQVEEWEDVKEEQREREHRDL
EYLVQELVQKPSLDEELKSDLQSKRENPKYLDMLKFREKLPSYSMREELVRLIRWNPVVV
VSGETGCGKTTQVTQFILDDHIERGVASLCRVVCTQPRRISAISVAERVAAERAESVGDG
KSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSDPCLSSISHLVLDEIHERSLHSDVLL
NIVKDLLSRRDDLKVVLMSATLNADKFSEYFGGCPMVHIPGYTFPVQEFLLEDVVELLRF
KPQQKERRPRFRRGFMHGQNARPEQEEKEAEYRESWPRFARTLRQRYSDSTADALEMMDE
DDKINLELIRDLIRHIVLNKDDGAILVFLPGWDNISTLNELLTADHMFKSDKFVIIPLHS
LMPTVNQTQVFKRPPSGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTM
TAEWVSLANAKQRKGRAGRVSPGKCYHLYNGLRASLLDSYQLPEIQRTPLEELCLQIKIL
KLGRIASFLKSTLDPPSDRAVELAITHLIDLNALDRNEELTPLGFHLARLPVEPHIGKMI
LFGALLACLDPVLTIAASLSFKDPFSIPLGKEKIADHRRKVLSKNSKSDHLTIVNAFRGW
EEAKRSGYRSEREYCWDNFLSANTLQMLQNMKVQFAEHLLAAGFVSRKDPKDPSANVNSD
NEKLLKAVIVAGLYPKVAKIRPSFHKKRAMPAKVYTKADGKVCIHPKSVNAEETQFHYTW
LIYHLKMRTTSIFLYDCTEVSPFSLLFFGGDISIQKDQEQETIAVDEWIVFQSPARIAQL
VKDLKKELDQLLEEKIKRPRPVDWSDRGSKDCAVISAIIDLITTQESHSAETSRELNHKH
NRYWE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggttacggaggtggacgtggacgtggacgagggcgtggctggaggtccgga
gaagagcgctggggttcaggctgggagcagcgggatgaaggtgctggaggatcaggagga
ggaggaggaggaggtggaggaggaggtcgggggaaacaccctcctcacctgaaaggtcga
gagatcggactgtggtacgccaaacacggaggagcccggagagccgaggccgagaggaag
tctagagccgtggttcagatggacgagtcgagagagcagcacatcacgcgcctcctaaac
tcggtccagagcgacccgtcccgagggcacgccccctccgcccctccgtacagacccgcg
agacgagaaccgaacactcacagctatttcgatggtgacgagcctacagacgagcagcag
aaaacatcgagcgtcacggaaacgaagccgaagccgaaggtgaaagacgaggaggaggag
caggtggaagagtgggaggacgtcaaggaggagcagagagagcgagagcacagagatctg
gagtacctggttcaggagttggtacagaaaccgtcgctggatgaggaattaaagagcgac
cttcagagcaaacgagagaacccgaaatacttagacatgctgaaattcagagagaagctt
ccatcctacagcatgagagaggagctggtgcggttgatccgttggaacccggtggtggtg
gtcagcggtgagaccggctgcggtaaaaccacacaggtcactcagttcatcctggacgac
cacatcgagcggggcgtggcctccctctgcagggtggtgtgcacccagccccgccggatc
agcgccatatcggtagcggagagggtggcggctgagagggcggagtcagtgggagacggg
aagtcctgcggttaccagatccgcctgcagagccggttgccacggaaacaaggctcggtg
ctgtactgtacgacggggatcattctgcagtggctgcgctccgatccatgtttatccagc
atcagtcacctggtcctggacgagatccacgagaggagcctgcactcggacgttctcctg
aacatcgtgaaggacctgctgagcagacgagacgacctcaaggtggtgctcatgagcgcc
acgctgaacgccgacaagttcagcgagtacttcggtggctgcccgatggttcacatcccc
ggttacaccttcccggtgcaggagttcctcctggaggacgtcgtggagctcctcaggttc
aaacctcagcagaaggagcggcgcccccgcttcaggaggggcttcatgcacggccagaac
gcgcgacccgagcaggaggagaaggaggcggagtacagggagagctggccccgtttcgcc
cgcactctccgacagaggtactcggacagcacggccgacgccctggagatgatggacgag
gacgacaagatcaacctggagctgattcgagacctcatccgccacatcgtactcaacaag
gatgacggtgccatcctggtcttcttacccggctgggacaacatcagcactctgaacgag
ctgctcacggctgatcacatgttcaaatccgataagtttgtcatcattccgcttcactcc
ctgatgcccaccgtcaaccagacccaggtgtttaaacggccgccctctggagttcggaag
atcgtgatcgcgacgaacatcgcagagaccagcatcactatagacgacgtggtgtacgtg
atcgacggcgggaagatcaaagagacgcacttcgacactcagaacaacatcagcaccatg
acggcggagtgggtcagcctcgccaacgccaagcagcggaaaggacgggcgggcagggtg
tctccaggtaaatgttatcacctgtataatggtctgagggcgagtctgctggacagttat
cagctccctgaaattcagagaacccccctggaggagctctgcctgcagatcaagatcctg
aagctgggccgcatcgcatcatttctgaagagcactttggacccgccgtcagacagagcc
gtcgagctggccattacccacctaatagatctgaacgcgctggaccggaatgaggagctg
actccgctgggtttccatctcgcccgtttacccgtggagccgcacatcggcaaaatgatt
ctgttcggcgctctgctcgcctgcctggatccggttctgaccatagcggccagtctcagc
ttcaaagatccattctccatcccactggggaaggagaagatcgccgaccacagacgcaaa
gtcctgtccaaaaactccaagagtgaccacctgaccatcgtcaacgccttccggggttgg
gaggaagctaagaggagtggatacaggagcgagcgcgagtactgctgggacaacttcctg
tccgccaacacgctgcagatgctacagaacatgaaagtgcagtttgctgaacatctgtta
gcagctggatttgtgagcaggaaggaccctaaagatcccagtgccaacgtcaactctgat
aacgagaagctcctgaaggcggtgatcgtcgctggtctttaccccaaagtcgccaagata
cgacccagcttccacaagaagagagccatgccagcgaaggtgtacaccaaggctgatggg
aaggtctgcatccatcccaaatctgtcaacgctgaggagacgcagttccactacacctgg
ctcatctatcacctgaagatgagaaccaccagtatctttctgtacgactgtaccgaggtg
tctccgttctctctgctgttcttcggtggtgacatctccatccagaaggaccaggagcag
gagaccatcgccgtggacgagtggatcgtcttccagtctcctgctcgcatcgctcaactg
gtgaaggacctgaagaaggagctggatcagctgctggaggagaagattaaacgtcctcgg
ccggtggactggagcgaccgcggctctaaagactgcgccgtgatctcggccatcatcgac
ctgatcaccacgcaggagagtcacagcgccgagacgtcacgggaactgaaccacaaacac
aaccggtactgggagtga
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