Trichomycterus rosablanca: 134323012
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Entry
134323012 CDS
T09921
Symbol
six5
Name
(RefSeq) homeobox protein SIX5 isoform X1
KO
K19474
homeobox protein SIX5
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134323012 (six5)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
134323012 (six5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134323012
NCBI-ProteinID:
XP_062860490
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Position
11:9180860..9187093
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AA seq
939 aa
AA seq
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MASLSLESPEQTENGSDRSEARVKEEKESADSSDQLLESFPKSALGFSSEQVACVCEALL
QAANVDRLWSFLATIPPQSDVLRGNETLLKARALVAFHREDFAELYAILESRDFHPSNHG
FLQDLYLRARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDGEETVYCFKEKSRNVLKE
CYKANRYPTPDEKKNLAKLTGLSLTQVSNWFKNRRQRDRTPSGTNSKSESDGNHSTEDEA
SKADLEDITDKPAAQAAGGSTASLISLSGTPCSTSSQLILNNPGGFLTSPHPLLLNGSPL
LSGTGTGVIINGLTLSDGHTVTLSPVTSNTPLLLNGAQVISKGSGNDSTSGEQTLTQIET
QASLTSTVLVPLKDEAKTSSPVSPLDFISVPEVIKNEEGTHTVCPTSISTSIISSTIMTP
TSLASIALTQNSILSSAAPQTNTVISSPGLSAQQHHLNLTTAISQVASSSMVSSTPVLTL
PQVVPSIQGISVSQLVQHPAATQVSSCPQLVPVSPITTQLPNGSSPQFQSQTLQISPSLS
QVQPQNGSSSVCENTVVSITQVPNGQPSQGMTLQLSGQSNSTPIQQIQTPIGTQGISVSS
PTQVVPVSQLKETGQPQLVPLSQVMSVPSIAGAGTIPFPQVVPAAPSFTIPSTGGAFQIL
TSGSGGGLGFAQGPVRISPIGPPQSVPAGGGIPSVQLLNSGVIQLPSPSPGNFLLAGGGP
FLSVQNGKLILTIPAGIQLTSMPVKSVPENFFPTSSSSSGLEQTSVLSSSVNQPFSSSFV
QTSCPMQTSFTGSSALYSSPEPGTLANPTPGASPNTSDSTIPTPTSVFPAQHMLSPESML
SFSPISSMASGPHGLQPAWSPIPLSSTAGFTLFDVRGKGDLHEDSALLGLPGGESLLLGT
PPPSDDMDSESHMDDVDMNGDSKILTQLQSVPVDDDLVL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttgtctttggagtctccagaacaaacggagaatggaagcgaccgatcagaa
gcccgggttaaagaagaaaaagagtcggcggacagttcggaccagttattggagagcttc
ccgaaatctgcgctcggtttctccagtgagcaggtcgcctgcgtgtgcgaggcgcttctg
caggcggccaacgtggatcggctgtggagcttcctggccaccatccctcctcagtccgac
gtgctacgtggcaatgagaccctgcttaaggcccgggccctggtcgctttccaccgcgag
gacttcgccgagctctacgccatcttggagagccgcgacttccacccgagcaaccacggg
ttcctgcaggacctgtacctgcgcgcgcgctacaaggaggcggagaggtcgcgcgggcgc
agcctgggggccgtggacaagtaccggctgcgcaagaagttccctctgcccaaaaccatc
tgggacggagaggagactgtgtactgttttaaagagaagtcgaggaatgtcctgaaagaa
tgctacaaagcgaaccggtacccgactccagacgagaagaaaaacttggccaaacttact
ggactgtctttgacccaagtcagcaactggtttaaaaatcggcgacagcgggacagaacc
ccgtctggtaccaacagcaaaagtgaatctgatggaaaccacagcacagaggatgaggct
agtaaagctgacttggaagacattactgacaaacctgctgctcaagcagctggaggctca
actgcttccctcatttccctctctggtaccccctgtagtactagcagtcagcttattctc
aataacccaggaggattcctcactagcccccaccctctactgctcaatggtagcccatta
ctttcagggactggaactggtgtcataattaatggtcttaccctgagcgatggccacaca
gtcacgctaagtccggtaacttctaacactccactgttgctcaatggagcccaggttatt
tcaaaaggcagtggaaatgattccacctcaggtgaacagactttaacccaaattgaaaca
caagccagccttactagcacagtcttagtcccattaaaagatgaagcaaaaacatccagc
cctgtctctccactggacttcatcagcgttccagaggttataaaaaatgaagagggcacc
cacacagtgtgtcccacctccatatccacatccatcatctcttccacaataatgactccc
acctcccttgcttcgattgcactgactcaaaatagcatcctttcttcagcagctcctcaa
actaatacagtcatttccagtccaggtttgtctgcgcagcaacatcatctaaaccttacc
actgccatctcacaggtggcatcatcttccatggtctctagcacccctgtccttacattg
ccccaggtggtaccctccatccaaggaatttctgtatcccaattagtgcagcacccagca
gctacacaggtgagctcatgccctcagctggtgccagtttcccccattactactcagcta
ccaaatggcagcagccctcagtttcaaagccagactctgcaaatcagtcctagtctttct
caagtccaacctcagaatggctcctcatcagtatgtgaaaacacagttgtgtccatcacc
caggtgcccaatggacagccttcacaagggatgacacttcagttgtcaggacaatccaat
tcaacccccattcaacagatacagacccccattggaacccaaggtatttctgtctcctcc
ccaactcaagttgtgcctgtttctcagctcaaagaaacaggacagccccagctggtccct
ttgtcacaagtaatgtcagtgccctccattgctggagcaggaaccatcccttttccacag
gtggtcccagcagcaccctcttttaccatcccatctactggaggtgctttccagattttg
acctcaggttctggaggaggtcttggttttgcccagggaccggttcgaattagccccata
gggcctccacaaagtgtacctgcaggtggaggtatcccaagtgtccagcttcttaattct
ggggttattcaactgccatctccttctccaggtaacttcctcttggcaggtggtggtcca
ttcctgagtgttcagaatggcaaactgattctcaccatcccagctggcatccagttaacc
agtatgcctgtcaaatccgtcccagaaaattttttcccaacctcttctagcagcagtgga
ctagaacaaacatcagttctttcttcttcagtgaatcagccattttcctcttcctttgtc
cagacctcttgtcccatgcagacatcttttactggctcatctgcgctttacagtagccct
gaacctggaactttggccaaccccactccaggggcctctccaaacacctcagactccact
atccccacacctactagtgtctttccggcccagcacatgctcagccctgagagcatgctg
tcctttagtcccatcagcagtatggccagtggtccacatggccttcaaccagcttggagc
cccatacccctgtcgtctacagctggattcacactgtttgatgtacgagggaaaggtgat
ctacatgaggactctgctttattaggcttaccaggtggggagtctttgcttttaggtacc
cctcctccaagtgatgacatggacagcgaatcgcacatggacgatgttgacatgaatggg
gactcgaaaattcttacccagttgcagtctgtccctgtagatgatgatttggtcttataa
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