Trichomycterus rosablanca: 134323086
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Entry
134323086 CDS
T09921
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
trn
Trichomycterus rosablanca
Pathway
trn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134323086 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134323086 (utp15)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134323086 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_WDR19_1st
VPS11_N
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_DCAF12
RMC1_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_2nd
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
134323086
NCBI-ProteinID:
XP_062860577
LinkDB
All DBs
Position
11:complement(18338545..18352639)
Genome browser
AA seq
519 aa
AA seq
DB search
MASFKPTKIQTYPKLGERVTEDTLYWKNYKAPVQIKEFGAVTKIEFSPQSPYNYVVTAST
RIQVYGPHSQEPLRSYTRFRDTAYGGSFRGDGKLLVAGSEEGLIRLFDIGGRVALRQFTG
HSKAVHVTSFLSDGYRVVSGSDDLSCRVWDVASGTQNSSYTEHTDYIRALTASRLNPDLF
VTGSYDHTVNVFDVRLGGSVMTLQHGHPVECVLFYPSEALLVSTGGRYVKIWDMLKGGQQ
LVSLKNHHKTVTCACLSSTDNRLLTGSLDRHVKVYNSSYKVVHSFDYATSILSLAVSPDD
EMLAVGMTNSVLSVRHRKHSEDKQDVSARKRRGPSYRVFVKGKNYMPKQDDFLVSKAVKQ
HLQKHDRLLKRFQVSKALDTALQTWRRFQKPEVTVAVMIELNRRGTLRNALAGRDEQSLT
LLLNFLLKNVTDTRFSSLLLMVADIIIDLYHQVIPQSPVVERLMQRLMELLGREAELQQE
LLQVLGILDTLFASLTPKKEVMGPAAASPIMQGPQLQAV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttttaaacccacaaaaatccagacgtatccaaaactaggagagagagtgact
gaggatacactttactggaaaaactacaaggctccagtgcagataaaagagtttggtgct
gtcacaaaaattgagttttctcctcagtcgccttacaattatgttgtaacagcttccact
aggattcaggtatacggaccacattcacaagaacctctgcggagttacactcgcttccgg
gacacggcgtatggcgggagcttccggggagatggaaagctgctggtggcaggaagtgaa
gaagggctcattcgtctgtttgacatcggtggccgtgtagctctccggcagttcaccgga
cactcgaaggctgtgcatgtgacgtcattcctgtcagatggctatcgtgttgtatcaggc
tctgatgacctgtcgtgtcgtgtatgggacgttgccagtggcacacagaatagctcttac
actgaacacaccgactacatcagagctctgacggccagccgactcaacccagacctgttc
gtcactggctcatacgaccatacagtgaacgtgtttgatgtgcggttaggtggcagcgtg
atgaccctgcagcatggccatcctgtagaatgtgtgctgttttatccctcagaagccctg
ctggtgtccacaggaggccggtatgtgaagatttgggacatgctgaaaggaggccagcaa
ctcgtatctctaaagaatcaccacaaaacagtaacatgtgcgtgtctgagcagcactgac
aaccgactgctcacaggctcattggacaggcatgtgaaggtctataattcctcctataaa
gttgttcacagctttgactatgcaacatctatcctcagtctggctgtctcacctgatgat
gagatgcttgctgtcggaatgactaacagtgtactaagtgtccgacacagaaagcactca
gaggacaaacaggacgtatctgccagaaaaagacgtggtccatcatatcgggttttcgtc
aaaggcaaaaactacatgcccaaacaggatgatttcttggtcagtaaggcagtcaaacag
catctgcagaaacatgatcgactcctgaaacgcttccaagtatctaaagcactagacaca
gcactgcagacgtggcgacgctttcaaaaaccagaagtgacggtggctgtgatgattgag
ctgaaccgcagaggaacgctgaggaacgccctcgccggtcgagacgaacagagtttaacc
ttactgctcaacttcctcctcaagaacgtcactgacacgcggttctcctccctgctgctg
atggtagcagatataatcattgatctgtatcaccaggtcattcctcagtctcctgtggtg
gaacgtctgatgcagcggctgatggagctgctgggtcgtgaagcggagcttcagcaagag
ctgctacaggtgctgggaatcctcgacacactttttgcctctctgaccccaaagaaggag
gtaatgggtcctgcagcagcatctcccatcatgcaggggcctcagctccaggcagtctga
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integrated database retrieval system
