Trichomycterus rosablanca: 134323177
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Entry
134323177 CDS
T09921
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn02010
ABC transporters
trn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134323177 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134323177 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134323177 (cftr)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
134323177 (cftr)
Transporters [BR:
trn02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
134323177 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
DUF87
FtsK_SpoIIIE
MMR_HSR1
RsgA_GTPase
AAA_16
Dynamin_N
AAA_23
T2SSE
NTPase_1
AAA_30
ATP-synt_ab
nSTAND1
Motif
Other DBs
NCBI-GeneID:
134323177
NCBI-ProteinID:
XP_062860684
LinkDB
All DBs
Position
11:complement(28001612..28060024)
Genome browser
AA seq
1471 aa
AA seq
DB search
MHKSPVDDAGFLSRYFFWWTSPIMRKGFKEKLRPSDIYQAPSKDTADVLAERLEKEWDRE
VISAKKKPSLLRALSKCFLRPFILFGVLLYLAEVTKSVQPQLLGRIIASFDPYHEPEREQ
GYFLALGLGLLFIARFLLLQPAMFGLHHLGMQIRIALFSLIYKKTLKLSSSVLDKISTGQ
LVSLMSANLGKFDQSLGMAHFVWISPLQCILCVGLIWELIEFNSFCALAAISLLGVIQAC
LSHKMGPYKTQRIQLTNKRLALTSEIMENLHSVKAYGWEEIMETIIGNIRQEEVKLTRKI
GSLRYFYSSAYFFSAIWVIIAAVLPQALTTGITVRRIFTTLSYCMVLRMTVTRQLPASIQ
MWYDTIRLIWKIEDFLSKEEYKMMEYDLSITEMKLENVTASWDEGIGELFEKIKQENKVN
GNPNGNGFFFTNLYVTPVLRSISLHLEKGEMLAVAGSTGSGKSSLLMTILGELVPSSGKI
CHSGRVSYFSQTAWIMPGTIRDNILFGLTYDEYRYSSVVKACQLEEDLAALPEKDRTPLA
EGGLNLSGGQKARVALARAVYRDADTYLLDDPFTHLDIATEKEIFDKCLCKLMVSKTRIV
VTNKLDHLKRADKILLLHNGESFFYGSFSELQSRRPDFSSLLLGLEAYDSITAERRCSIL
TETLRRVSVDETSGIRSDRPAYRQVAPPSYKDERKASVIINPLVADRKASFIPGIEEEVK
RPLSDRKFSLVPENELVDESFIVNDVYHNHGVHMAGQRRQSVLAFMTNAQGSGRRDQLQS
SFRRRLSIVPQSELAAELDIYARRLSKDGAYDITGDMDEENIEACFADEQMEDIFETTKW
NTYVRYVSTNRSLTYVLIFVLIIYAIEVNILFMLIINTNYQIAHNTNMSLSSSLYAVIIR
PTSSYYIIYIYVATSESILALGFFRGLPLVHTMITISKKVHQKMLSSVLRAPMSVLNTMK
TGRIMNRFTKDMATIDDMLPLLLFDLVQLTLVVVGCILVVSIMRPYIFLAATPLALIFIV
MRKYFLRTGQQLKQMETEARSPIFSHLIISLKGLWTIRAFDRQAYFETLFHKALNTHTSV
WFLYLSTLRWFLFRADMLYVFFFTLAAWIAVGTNQDKPGEIGIIIALAMLILGTFQWCVV
TSIAVDGMMRSVERVFKFIDLPSEEPKPRLGHRKTSDLVIENQNACSETSWPSRGQMDVQ
NLMVKYTDGGHAVLKNLSFTVEGGQKVGILGRTGSGKSTMFNALLRLAYTDGDMSIDGVS
CQSMALQKWRKAFGVVPQKVFIFTGTFRMNLDPYGCHSDDELWRVTEEVGLKSVIEQFPD
KLDFQLEYGGHVLSYGHKQLMCLARSILSKARILLLDEPSAYLDPITVTVLKKILRQSFS
TCTILLCEHKVEPLLECQCFLMMEQGKVKTYDSIQRLLNETSQLKQAISQAERLKLFPRR
NSSMHVPQPKLSSVTLTLQEEAEDEVHDTRL
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaatcacctgtggatgatgccggctttctttcgagatatttcttctggtggacg
agccctattatgcgaaagggtttcaaggaaaagttacgaccatcagatatatatcaagct
ccttcaaaagatactgcagatgtgctcgcagaacgtctggaaaaagaatgggacagagaa
gttatttctgcgaagaaaaaacccagccttctacgagcgctctccaaatgctttcttcga
cccttcatattatttggagttcttctctatttggcggaagtcacaaaaagtgtgcagcca
cagctcttgggacgaataatagcctcattcgacccgtaccatgaaccagagcgagagcag
ggctacttcctggccctgggccttggcttgctgttcattgcccgttttcttctgctgcag
cctgccatgtttgggctgcaccatctgggcatgcagatccgcattgccctctttagctta
atctataaaaagacactgaagctatctagtagtgttctagacaagatcagcacagggcaa
ctggtcagcctgatgtcagccaatctgggcaagtttgatcagagcctaggcatggcacac
tttgtgtggatctctcctttgcagtgcatcctgtgtgtaggactaatatgggagcttatt
gagtttaatagcttctgtgcccttgctgcaatctcactactgggtgtcatacaagcctgc
ctgtctcataaaatgggcccctacaaaacacaaagaatacagctcaccaataagcgtttg
gctttgacttcagagatcatggagaacctgcactcagtgaaagcctatggatgggaagag
attatggagaccatcattgggaacatcagacaagaagaggtcaagttgaccaggaagatt
ggctcactgcgctacttctacagctctgcctatttcttctctgccatttgggtaatcata
gcagcagtgttgccccaggccctcaccactggcattacagtgcggcgcatctttaccacg
ctctcatactgcatggtgctacgcatgaccgtcacacgccagctgcccgcttcgattcag
atgtggtacgacactatcaggcttatatggaaaattgaggattttcttagcaaagaagaa
tacaaaatgatggagtatgaccttagcattacagagatgaaacttgaaaatgtcaccgct
tcctgggatgagggtattggagaactgtttgagaagatcaagcaggagaacaaagtaaat
ggtaatcccaatggaaatgggttcttcttcactaacctctatgtaacccccgtcctgaga
agcatcagcctgcacttggagaaaggagaaatgctggcagtggctggatctacaggttct
ggaaagagttctttattaatgaccatcttgggtgagctggtcccttcctcagggaaaatc
tgccacagtggtcgcgtctcttacttctcccagaccgcctggatcatgcctggcaccatc
cgtgacaacatcctgtttggcctgacctatgatgaataccgttatagcagcgtggttaaa
gcatgccagctcgaagaggacctggctgctctccctgagaaggacagaacacctttggca
gagggagggttaaatctgagtgggggtcagaaggcacgggtggcactggctagagctgta
tacagagatgctgatacctatctgctggacgaccctttcacccacctggacattgcaaca
gagaaagagatttttgacaagtgtctgtgcaagcttatggtctccaagacccgcatcgtg
gtaaccaacaagctcgatcacctaaagcgggcggacaagatcctgctgctgcacaatggg
gagtcttttttttatggctcgttctcagagctgcagtcgcgccggcctgactttagctct
ctgctgctaggtctggaggcctacgacagcatcaccgcagagcgacgttgctcgattctc
accgagacactacgcagggtctcggtggatgaaacttcaggcatccgttccgatcgaccc
gcgtaccggcaggtggcccctccttcctacaaagatgaaagaaaggcttctgtgatcatc
aacccgctggtggctgaccgcaaggcttccttcatcccggggattgaggaagaggttaag
cggccactgtctgaccgcaagttctccctggtgcctgagaatgagctggtggatgagtca
tttatagtgaacgatgtgtatcacaatcacggtgtgcacatggcaggccagaggaggcag
tcagtgctggcattcatgacaaacgcacaaggttcgggcagacgtgatcagcttcagtcc
tctttccgccgccgcctatctatcgtgccccagagtgaactggccgccgagctggacatc
tatgctcgacgattgtccaaagatggtgcctacgacattaccggagacatggatgaagag
aatattgaggcatgcttcgcagatgaacaaatggaggacatcttcgaaaccactaaatgg
aacacgtatgtccgatatgtgtctaccaacagaagtctcacttatgttctgatcttcgtt
cttattatctatgctattgaggtaaacatattattcatgcttataatcaacaccaattat
caaatagcacacaataccaatatgtctttgtcaagctcattatatgctgtcatcatccgt
cccaccagcagctactacattatctacatttatgtggctacttctgagagcatcttagct
ctgggcttttttcggggacttccactggtccacactatgatcaccatctcaaagaaagtg
catcagaaaatgctgagttctgtacttagagcacctatgtctgttctaaacaccatgaag
acaggtcgtatcatgaataggtttacgaaagacatggctactatcgatgacatgttgcct
ctactattgtttgaccttgtccagttgaccctggtggtggtgggatgtattttggtggtg
tccattatgcggccgtacattttcctagcagcaacacctttggctttgatctttatcgtt
atgaggaagtatttcctgcgtacaggacagcagctgaagcaaatggaaactgaagctcga
agccccatcttctcccacctcatcatctcactgaaaggcttgtggacgatccgggccttt
gaccggcaggcgtacttcgagacactgtttcataaagcgctcaacacacacacatctgtc
tggttcctatacctctccaccctgcgctggttcctctttcgtgctgacatgttatatgtc
ttcttttttacgcttgctgcctggattgcagtaggaaccaaccaggataaacctggtgag
attggcattattatagccttggcaatgctaattctaggcaccttccagtggtgcgttgtt
accagcattgcagtggatggaatgatgcgttctgtggagcgcgtcttcaagttcatcgac
ctgccgtccgaggagcccaagcctagactcggccatcgaaaaacctcagacctggttatt
gaaaaccagaacgcctgcagtgaaactagctggcccagtcgtggacagatggacgtgcag
aatttaatggtcaaatatactgacggggggcacgctgtgctcaagaacctctccttcacc
gtggaggggggacagaaggtgggcattctaggcaggacaggctctgggaaaagcacaatg
ttcaacgcacttctgcgcctggcatacacagatggagacatgtccatcgatggcgtttcc
tgccaaagcatggccctgcagaagtggaggaaggcttttggcgtggtgcctcagaaggtt
ttcatttttactggaacattccgtatgaacttggatccatacggatgtcatagtgatgac
gagctgtggagggtcactgaggaggtggggcttaaatcggtcattgagcagtttcctgac
aagctagacttccaactggagtacggcggccacgttctgagctacggccacaagcagctg
atgtgtctagctcgatccattctcagcaaggcccgaatcctgctgctggatgaacctagc
gcatacctcgacccaatcactgtgacggtactaaagaagatactgaggcagtccttctcc
acctgcaccatcttactgtgtgaacacaaagtggaacctctgctcgagtgccagtgcttc
ctgatgatggaacagggcaaggtgaagacctacgattccatccagcgactcctgaacgag
accagccagctaaaacaggccatcagtcaggccgagcgcctcaaacttttccctaggagg
aactccagcatgcacgtacctcagcccaaactcagctccgtcacgctcacactgcaggag
gaagcagaggatgaggttcatgacactcggctttga
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integrated database retrieval system
