Trichomycterus rosablanca: 134323242
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Entry
134323242 CDS
T09921
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04115
p53 signaling pathway
trn04120
Ubiquitin mediated proteolysis
trn04137
Mitophagy - animal
trn04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134323242 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134323242 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134323242 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
134323242 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134323242 (siah1)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134323242 (siah1)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
134323242 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
TerY_C
Motif
Other DBs
NCBI-GeneID:
134323242
NCBI-ProteinID:
XP_062860761
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All DBs
Position
11:complement(30525440..30557837)
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AA seq
335 aa
AA seq
DB search
MSPTARLQPVYSWKGVFKLFTCVAARTANKPKEVHTFQEKELALLGNHMDEEMSRQTATA
LPTGTSKCAPSQRVSQPLTGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRP
KLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYS
CPCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGF
HFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGI
ATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccactgctaggctacaacctgtgtactcatggaagggggtgttcaagctcttc
acatgtgtagctgcccgaacggccaacaagcctaaagaggtccacacatttcaagagaaa
gagctagccttactggggaatcatatggacgaagaaatgagtcgccagactgccaccgcg
ctgcccacaggaacctccaagtgcgccccctctcagcgtgtgtcgcagccgctgacgggc
accaccgcctccaacagtgacctcgccagtctgttcgaatgcccggtatgcttcgactac
gtgctgccacccattcttcagtgccagagcggtcacctggtgtgcagcaactgccggccc
aagctgacgtgctgcccgacgtgccgcggccccctgggctccatccgcaacctggccatg
gagaaagtagccaactcggttctgtttccgtgcaagtacgcttcgtcgggctgcgaggtg
accctgccgcacacagacaaggccgagcacgaggagctgtgcgagttccggccgtactcg
tgcccgtgcccgggcgcctcgtgcaagtggcagggctccctggacgccgtcatgccgcat
ctcttgcaccagcacaagtccatcacgacgctgcagggcgaggacattgtctttctggcc
acggacatcaacctcccgggtgccgtggactgggtcatgatgcagtcctgcttcggcttc
cacttcatgctggtgctggagaagcaggagaagtacgacggccaccagcagttcttcgcc
atcgtgcagctcatcggcacgcgcaaacaggcggaaaacttcgcctacaggctcgaattg
aacggccaccggcggcgcctcacctgggaggccacgccacggtcgatccacgagggcatc
gccacggccatcatgaacagtgactgtctggtgttcgacacctccatcgcccagctgttc
gccgagaacggaaacctaggcattaacgtcactatatccatgtgctga
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