Trichomycterus rosablanca: 134323258
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Entry
134323258 CDS
T09921
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like isoform X1
KO
K06842
semaphorin 6
Organism
trn
Trichomycterus rosablanca
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
134323258
NCBI-ProteinID:
XP_062860782
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All DBs
Position
11:complement(2172607..2214927)
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AA seq
1040 aa
AA seq
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MNGVTILNLLLLLTVRNHAVRFPEDAAPFDSVDHHYSRQYPVFRGRPAGNESQHRLDFQL
MTRIQDTLFIAGRDQVYLVSLRESYRNEITPYRKLTWRSSQADRENCALKGKHRDECHNF
IKVLVPRNDDLAFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVALFSDG
KLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGNYVYFFFREIA
AEHNNLGRAVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQSIT
DIIDIDGVPSVVGVFTTQLNSIPGSAVCAFSMPDIERSFNGRFKEQKTPDSVWTPVPEDR
LPKPRPGCCAAHGSAESYKSSNEFPDETLQFIKLHPLMDAAVPAIGDEPWFTKTRVRYRL
MALAVDNAAGPYGNYTVVFIGSEEGIVHKVLAKTAPFSLNDSVLLEEIDVFNQAKCLSSS
EDERRVLSFHLDTHTHTLYVAFSSCVVRIPLSRCERHKNCHKACIASRDPYCGWMPHGAC
ERIPAAVQSGFEQDVEFGDTTRLGDCHDFLSTASAPGFKSYGDATAAAGQDPPEPPFTSS
SDPLNPPHTRPSSAPPRLSGSREHALPDDSSTSYRAVLEGVWDIQSADANQLVHMNILIT
CVLAAFLLGACIAGAVVYCYRDVFLHKKKRRVHKLPRGKDEESPPPSSSDSAGSLAKLNG
LFESPVKEFSAMETARIYFNRDDDKSPDTKIPDGENPELAALPTPDSTPVLQQKGVQPIK
NQWDRGQGKGCAQQKEAPPKSPQNPSIPSAVVLPNATHEKSGDTGSVKSIRKERRRSMDA
RNTLNELLKHLNETSDPNGILTDAPRPRQHLTLEPMGTLTEIPPKVPSREASLYSPTAAY
SPTASYSPSSYSPSSYSMSSSLPRHSPTKRVDVPSVPPSPTGQTGTLDRQRFHRGGSMHR
HASGGGMVMRQSSFNRGGLGPPTPPSRMDSHGIARQHSYSGHGSLTRTSVKRTASLKPDV
PPKPGGFVPVNARPMNKYSY
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgtaaccattctcaacctgctgctgctgctaacggttcggaaccatgccgtc
cgcttccccgaggacgccgcccccttcgacagcgtggaccatcactattcccgacagtac
ccggtgttccggggtcggccggcggggaacgagtctcagcaccggctggacttccagctc
atgaccaggatccaggacacgctcttcatcgccggcagggatcaggtgtatttagtgagt
ctgagagagtcgtacaggaacgagatcacgccctacaggaagttaacgtggaggtcgagc
caggcggaccgagagaactgcgccctgaaaggaaaacaccgggacgagtgccacaacttt
attaaagttttggtgcccagaaacgacgacctggctttcatctgcgggaccaacgggttc
aaccccatgtgccgttactacaggctggataacctggagttcgacggtgaggagatcagt
gggttggcgcgatgcccctttgatgccaagcagaccaacgtggctctattttcagacggt
aagctgtattcggccacggtggcggacttcctggcgagcgacgcggtgatttatcgcagc
atgggagacggatcggctctgagaaccatcaaatacgactccaagtggttaaaagagccg
cacttcctgcacgcagtggattatgggaactacgtttacttcttcttccgagagatcgct
gcagaacacaacaaccttggacgggcggtgtactcccgggtcgcccggatctgtaagaac
gacgtgggcggatcccagcgggtcctggagaaacactggacgtcgttcgtcaaggctcgt
ctcaactgctccgtccccggagaatcgttcttctacttcgacgtcctgcagtccatcacc
gacatcatcgacatcgacggggtcccgtctgtggtgggcgtgttcaccacccagctcaac
agtattccaggttcggccgtgtgcgccttctccatgccggacatcgagagatcctttaac
ggacgcttcaaggagcagaagactccagattcggtgtggacgcccgtccccgaggacagg
ctgcccaaacccagacccggttgctgcgccgctcatggatcagccgagtcctacaaaagc
tcaaatgagtttccggacgagacgctgcagtttataaagctgcacccgctgatggacgcc
gccgtgcccgccatcggagacgagccctggttcaccaagaccagagtcaggtaccggctg
atggcgctggcggtggacaacgcggcgggtccgtacgggaactacacggtggtctttatc
ggctccgaggagggaatcgtgcacaaggtgctggcgaagaccgcgcccttctccctgaac
gacagcgtcctgctggaggagatcgacgtcttcaatcaggctaaatgtttgtcgagcagc
gaggacgagcggcgggttttatccttccacctggacacacacacacacaccctgtacgtg
gcgttctccagctgtgtggtccggattcctctcagccgctgtgagagacacaaaaactgt
cacaaagcgtgtatcgcgtctagagatccgtattgtggttggatgccacatggagcttgt
gagaggattccagcagcagtacaatctggttttgaacaggatgttgagttcggtgacacg
acgagactcggcgactgtcacgattttttgagcaccgcttcagctccgggtttcaaatca
tacggcgacgccactgctgcagcaggtcaggaccccccggagccgccgttcacctcctct
tcagatcctctaaaccccccccacacccgcccctcctccgccccgcctcgactctccggc
tcccgggaacacgccctccccgacgactcttccacctcgtaccgagcggtgctggagggt
gtgtgggacatccagtcggccgacgctaaccagctggtgcacatgaacatcctgatcacg
tgcgtcctggccgccttcctgctgggggcgtgcatcgccggcgccgtggtctactgctac
cgcgacgtcttcctgcacaagaagaagcggcgggtccacaagctgccacgcggcaaagac
gaggagtcgccgccgccgtccagctcggactcggcgggaagtctggctaagctgaacggt
ctgttcgagagtccggtgaaggagttcagcgccatggagacggccaggatctacttcaac
cgggacgacgacaagagtcccgacaccaagatcccggacggagagaacccggagctagcc
gcgctgcccacgcccgattccacgcccgtgctccagcaaaagggggtccagccaatcaag
aaccagtgggaccggggtcaagggaaagggtgcgcgcaacagaaggaggcgccgcccaaa
agcccgcagaaccccagcatcccgagcgcggtggtgctgcccaacgccacccacgagaag
agcggcgacaccgggagcgtcaaatccatccggaaagagcgccggcgctccatggacgcc
cggaacacccttaacgagctcctcaagcaccttaacgagaccagcgaccctaacggcatc
ctgacggacgcgccccgccccaggcagcacctcacgctggagcccatgggcacgctgacc
gaaatcccgcccaaagtcccgagccgggaggcgtcgctgtactcgcccacggcggcgtac
tcgcccacggcgtcgtactcgccctcgtcgtactcgccctcgtcgtactccatgtcctcc
tccctgcccaggcacagcccgaccaagcgggtggacgtcccgtccgtccccccgtcgccc
acgggacagacgggcaccctggaccgccagcgcttccaccgcggcggatccatgcaccgc
cacgcgtccggcggcgggatggtgatgcgccaatcgagcttcaaccgcggcggcctgggc
ccgcccacgccgccctcccggatggactctcacggcatcgccaggcagcacagctacagc
gggcacggctcgctcacgcggacttccgtcaaaaggacggcgtcgttaaaacccgacgtc
ccgcccaaacccggcgggttcgtcccggtgaacgccaggcccatgaacaagtacagctac
tga
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