Trichomycterus rosablanca: 134323371
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Entry
134323371 CDS
T09921
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134323371 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134323371 (snrpa)
Spliceosome [BR:
trn03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
134323371 (snrpa)
Complex B
134323371 (snrpa)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
134323371
NCBI-ProteinID:
XP_062860955
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All DBs
Position
11:complement(37521043..37526318)
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AA seq
274 aa
AA seq
DB search
MSGPDLRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRILKLRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKPESGAS
KKAAAASALAAMPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPGMAPGQMPPGAMPPGGM
MPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAF
VEFDNEVQAGAAREALQGFKITQNNAMKISFAKK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcccggatctccgtctcaatcacactatttacatcaacaacttgaatgaaaaa
atcaaaaaggatgaattgaagaaatcgctttatgcgattttctcgcagtttggacaaatc
ctggacatccttgtttctcgcatattgaagttaagaggtcaggccttcgtgatcttcaaa
gaagtcaacagtgcatccaacgctctgagatccatgcagggctttccgttttatgataag
cccatgcgcattcagtatgcaaagcaagactctgacatcattgcgaagatgaagggtacg
tatgtggaacgggatcgtaagaaggagaagaagaagcccaagcctgaatcgggagcctca
aagaaggcagctgctgcgtcggctctcgctgccatgcccggcatgcctcctatgagtcag
gctcctcgtatgatgccgatgccgggccagcctccttacatgccgcctccaggtatgatg
ccgcctcctgggatggcccctggacagatgccaccaggtgccatgcctcctggtggcatg
atgcctggtcagatgccaggccagatgcctcagcaggtctcagagaacccacctaatcac
atcctgttcctcaccaacctgccagaggagaccaacgagctcatgctgtccatgctcttc
aaccaatttccaggtttcaaagaggtgcgtctcgtccccggccggcacgacatcgccttc
gtggagttcgacaacgaggtgcaggctggtgcagccagggaagcgttacagggcttcaag
atcactcagaacaacgccatgaagatctcgttcgccaagaaataa
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