Trichomycterus rosablanca: 134323497
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Entry
134323497 CDS
T09921
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134323497 (irf2bp1)
04121 Ubiquitin system [BR:
trn04121
]
134323497 (irf2bp1)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
134323497 (irf2bp1)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Atypical E3
134323497 (irf2bp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
134323497
NCBI-ProteinID:
XP_062861091
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All DBs
Position
11:5636443..5643434
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AA seq
590 aa
AA seq
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MSSSSSSQAASRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIEMLIDTARQLK
RTHVMQDGRSPGPQPLGKHGPGGKDGTLEGGRSTAERYERSRGEFVPARLPNGLTRLEDG
AIAEVSRQSPNARRTMVGVPPNLMAQGIVGTPHGLLIGPRSTGAPLAISAPMLSEIGKRQ
PMGVGLPFVSPDFEKQRSAEALAELSESVRNRAEDWANRPKSVRDTLLTLSSCAPFNVRF
KKDHGLIGRVFAFDAKLGVEFELKVFVEYPCGSGNVFSSLLTLVKQMFYDSQKDSGKVIS
SGFKYVEYEKRHGAGDWRLLSELLSDAVRAFKEPPAPDSLPQPYLDASCAMLPSPLHCHI
GRPGPSRMRRRKASPDPEGSERMISEEQLRQHWYPGLGIHISTSSLSGQSANLQEVIPLS
HSSDPSPISALMSVADNVGGVSQSPKDVPGSSAAHTSSASPSSSGQRRLASRNGENGAGT
ATVATAMPPVATGDQGSENAGASGSPLCCTICQERLEDTHFVQCPSVQVHKFCFPCTRDF
IRSQGSGGEVYCPSGDKCPLVGSNVPWAFMQGEISTILAGDVKVKKERDP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcttcctcctcacaagcagcctccaggcgccagtggtgctatttatgtgat
ttacctaaaatgccgtgggccatgatttgggattttagtgaagcggtgtgtcggggttgt
gttaactatgagggggcagaccggatagaaatgctgatagacactgcgagacagctgaaa
agaacccatgtgatgcaagatggtagatcaccaggtccacaaccactggggaaacatggg
cctggtggcaaagatggcaccctggagggtggcagaagcactgctgaacggtatgagagg
tccagaggagaatttgtacctgctagattgcctaatggactaacaagactggaagatggg
gctattgcagaagtcagcaggcagagtcctaatgcaagaagaaccatggtgggagtgcca
cctaatttgatggcacagggcattgtgggtacgccgcatggccttttaattggcccaaga
tctactggtgcacctttggccatctcggcaccgatgttaagcgagattggaaagaggcag
cccatgggtgttgggttgccttttgtgagcccggattttgagaagcaaagaagtgccgag
gccctcgcagaactttcagaaagtgtccgtaaccgtgcagaagattgggctaaccgtccc
aaatccgtacgtgacactttgctgacactgtccagctgtgccccatttaatgtccgattt
aagaaagatcatggcctaatcggtagagtctttgcatttgatgccaaacttggggtcgag
tttgagcttaaggtgttcgtcgagtacccatgcggctctggaaacgtcttctccagcctg
ttaacactggtcaaacagatgttttacgatagccaaaaagattctggaaaagtgatcagc
tcagggtttaaatacgtcgaatatgagaagcggcatggtgccggagattggcggcttctt
tccgagctcctcagcgatgctgtgcgggcattcaaagagccgcccgcacctgattccctt
cctcagccttacctggatgcaagctgtgcgatgttgccgtctccgctccactgtcatatt
ggccggcctggtccatctcgtatgcggcgccggaaagcctctccagatccggaaggctct
gaaaggatgatttcagaggagcaattgcggcagcactggtaccctggtctgggcatccac
atttccaccagttctttgtctggacagtctgcaaatctgcaagaagtgattcctctttca
cacagtagtgacccctccccaataagtgccctgatgagcgtcgccgacaacgttggaggg
gtaagccaatcgcctaaagatgtcccaggaagcagtgccgctcacacttccagtgccagc
ccgtcatcatctggacagcggcgactggcatcgcgtaatggagagaatggagctggaaca
gccaccgttgccacagcgatgcctccggttgctacaggtgaccaaggatccgagaacgca
ggagcctcaggttcaccactttgttgcaccatttgccaggaacggcttgaagatacacac
ttcgtccagtgcccatcagtacaagttcacaagttctgctttccctgcaccagagatttc
atccgcagtcaagggtcagggggtgaagtgtactgcccaagtggcgataagtgcccactg
gtgggctccaatgtgccctgggcatttatgcagggagagatttccaccattctggcagga
gacgtgaaggtgaagaaggagagagacccttaa
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