Trichomycterus rosablanca: 134323508
Help
Entry
134323508 CDS
T09921
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
trn
Trichomycterus rosablanca
Pathway
trn04517
IgSF CAM signaling
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134323508
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134323508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134323508
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134323508
Intermediate filaments
Intermediate filament-binding proteins
134323508
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
Helical_needle
DUF2730
CG7065_mid_helical
Motif
Other DBs
NCBI-GeneID:
134323508
NCBI-ProteinID:
XP_062861105
LinkDB
All DBs
Position
11:5794104..5875875
Genome browser
AA seq
1874 aa
AA seq
DB search
MKEGKRIVAQKRLYSAGINDKLLEVKDEWKRLEDQAAMRLGHLQEALDFFQFSAEMDDQL
AWLQDAYRLVSSDDFGHDEFSTQSLLKKHYRVREEVDKHRKNVVALRKHATTLPMHYGEM
EEVKERIQEVERVYGEVAEVAVMREQWLNDALAVYRMFSEVNACELWIDEKEKWLNNMEV
PERLEDVEVVAHRFESLDQEMNSLMGRILDVNQIVQQLLDGGHPSSSEVRGCQDHLNSRW
NRMVELVEQKKDHLDSILRIQNYLLESSEIKSQIQEKRKAIDATQYSGSDLGSVLALQRR
LSTMEGALAVLEPKLIHLQQEAEELATSQPHKAEEILIPFDGVSVEWDELKRTLQGCEDS
LTVAGRLQQFIQDLDSFLTWMVQKQTEAASSELPESLEEAEKLINLHAALNEEIQSYEED
YERLQSVRELLDGEETQLANAALHQWLQKLSAGWNKLLQMWESRRDELVQAHIYHLFMKD
VKQAESFLNNQESSLAHVELPTTVETVEAAIKKHKEFSTAMELNLHRIEAVIEAGESLIS
QSNIYSERIRERVDLLITRGNQNRDLAQDWLRKLNHQWALQRFLQDCHELGDWVMEKMLT
ARDSVCNDLQQLHKKWLKHQAFMAELSQNKEWLDRIQKDGERLMEEKPELSEMVQQKLNE
IRECWLELENSAQIKALQLFENDRAQQISQNYTRLNERVQELEVQLCHLDRGNDLTTVNK
QLKKLQMMERQMEEWCKDVCHLQQQSVSLPDECLMLDAVSEQQTEVESRIVRLIEPLKER
RRILLASKEVHQVRRDLQDEILWVQERIPLAMSQETGSTLQAVQQLMKKNQSLQRELEGH
CGRVEEVMERATVFAAVRTSEAECISGLIEGLHNLWGELWAETERRQVQLDSMYHAQQYY
SDITEVEAWLSEQELHMMNEEKGKDEASTLQLLKKHLALEQTIDDYAETIGLLSQQCRQL
LEICHPDSEQISKRQSQIDRLYVSLKDLVDERKCRLEQQYWLFQLNREVDELEQWIAERE
ISASSTELGQDYEHVTILQENFSAFSSETGGVGQERVLAINQMVDELIDYGHADAAVIAE
WKDGVNESWAELMELMETRAQMLAASHQLHKFFSDCREVMTQVEDKYRRLPEVRDQKDGT
TNTSSLQRLMSTFEHDIQLLVNQVRQLQESAAQLRTIYAGERADAIAMQEHEVMQAWKEL
LICCEECRLQITTATDKLRFFGLVRDQLMWMDSIICQIGMGEKPRDVSSVEVLMNYHQSL
KNEVEARNTSMVQCIEMGRTLLASRNPASEEIQEKLERVLSKQKELMEKWDKHWEELQHM
LEVHQFAQEAVVAESWLSAQETFLESKELGSSVDEVEQLIRRHEAFRKAAAAWEERISSL
RRLTTCQSATGQTTIVEKLKAEQSKLPPTPLLGRKVFLDPQESSPARSSPSSLHKQTIYE
HGDLWAERNHPHPSPPSPSLRLSSPVAPYSPVMDRSATLRVPEVRHVRVLGVAAGLGMAS
EPKTTLTKPAQDIVRPLVDVNVMAEVVLQEPGRARNVTEQQVQQHHPPQKDSRIERQLSN
EQLIQARRDELPQEVWRERAEREKRLERQTSSEQEIYDPRRRDRQRLERQESSEHDTGRD
QSDRRSGGGEKRSTLADIVEQLQEREAAQARGEIPRVPNGVQDKSSRPDRPRARDRPKPR
RRPRPRDGAQGETRRSLSAPAQSGPSAPQPPSHQAQREGFLFRKLDIESQKKSSNRSWVN
LYCVLNKGELGFYKDSKNTASTYNNEPRLVLSSCSCDINLGYKKKKNVFTLKTKDGSEYL
FHAKDEDDLKGWISSISTSITEHDDISKYGQSHPTTSSTDEGTRREGSRAEKSDRASVRS
DKGEKMEKKSSKKK
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggggaagcggatagtcgctcagaaacgcctttacagcgccggaatcaacgac
aaactgctggaggtgaaggatgagtggaaacggctggaggaccaggccgcgatgaggctc
ggccacctccaggaggcgctggatttcttccagttcagcgcagaaatggacgatcagcta
gcctggctccaggacgcctacaggctggtgtccagcgatgattttggacatgatgagttt
tccacgcagtcgctgttgaagaagcattaccgtgtccgagaggaggtggacaaacatcgg
aagaatgtggtagcgctgcgtaaacacgccaccacactgcccatgcactatggtgagatg
gaggaggtgaaggagcggatacaggaagtggagcgggtgtacggggaggtggcggaggta
gcggtgatgagggagcagtggctgaacgatgcgctggctgtgtatcgaatgttcagtgaa
gttaacgcctgtgaactgtggatcgacgaaaaggaaaaatggctgaacaacatggaggta
cctgagagactggaggacgtggaggtggtcgctcacaggtttgagagcttggaccaggag
atgaacagtctgatgggaaggattttggatgtgaatcagattgtacagcagttgttggat
gggggccatcccagttcttctgaggttcgaggatgtcaggaccaccttaacagcaggtgg
aaccgtatggtggagctggtggagcagaagaaggatcatctggactctattcttcgtatt
caaaactatttgctggaatctagcgagatcaaatctcagattcaggaaaaacgtaaagcc
atcgatgccactcagtactcgggcagcgacctgggcagtgttttagctctacagcgacgt
ttatccaccatggagggcgctctggccgttctagagcccaaactcatccacttacaacag
gaagcagaagaactggcaacctcccagccccataaagccgaggagatcctgattccgttc
gatggcgtgagtgtggagtgggacgaattaaaacgaaccctgcagggatgtgaggactct
ctgaccgtggccggacggctgcagcagttcatccaggacctggactcgttcctcacctgg
atggtgcaaaagcagaccgaggcagcgtccagcgagcttcccgagtctctagaagaggcg
gagaagctgatcaatcttcatgcggcactgaacgaggagatccagagttacgaggaggat
tatgagcggctgcagtcggtcagggagctgctggacggggaggagacacagttagccaac
gcggcgctgcaccagtggctccagaaactgagcgccggctggaacaaactgctgcagatg
tgggagagtcgaagagacgagctggtgcaggcacacatctaccacctgtttatgaaggac
gtcaaacaggccgagtccttcctcaacaaccaggaatcctcattagcacacgtggaactc
ccgaccacggtggagacagtggaagctgccatcaaaaaacataaagaattcagcacggcc
atggagctcaacctgcaccgcatcgaagccgtcatcgaagcaggagagagtctgatcagc
cagagcaacatctactctgaacggatcagagagcgagtggatcttctcatcaccaggggg
aatcagaaccgagacctggctcaggattggctcaggaaactcaaccaccagtgggcgctg
cagagattcctgcaggactgtcatgagttaggtgactgggtaatggagaagatgctaaca
gctcgtgattcggtgtgtaatgatcttcagcagctgcacaagaaatggctgaaacatcag
gccttcatggctgaactttcacagaataaagaatggctggacaggattcagaaggatgga
gaaaggttgatggaggagaagccggagctgagtgagatggtgcagcagaagctgaatgaa
attcgggagtgttggttagaactggagaactctgcacagattaaagctctgcagttgttc
gagaatgaccgggcacagcagatctctcagaactacactcggctgaacgaacgcgtgcag
gaactggaagtacagctgtgtcacctcgaccgcggcaacgacctcaccaccgtcaacaag
cagctcaaaaaactacagatgatggaaagacagatggaggaatggtgtaaggacgtgtgt
catctacagcaacagtccgtctctctaccagacgagtgtttgatgttagacgccgtttcg
gagcagcagaccgaagtcgagtcgaggatcgttcgtctcatcgagccgctcaaggagagg
cggaggatcctgctcgcctccaaggaggttcaccaagtacgacgagacctgcaggacgaa
atcctgtgggtgcaggaacgcatcccgctggccatgtcacaggaaacaggaagcacatta
caagctgtgcaacaactcatgaagaaaaatcagagcctgcagagggagctggagggccac
tgcgggcgtgtagaagaggtgatggagcgagccaccgtgtttgcggccgtacgtacgtcg
gaggcggagtgcataagcgggttaatcgagggtctgcacaatctgtggggggagctgtgg
gccgagacggagcgcaggcaggtgcagctggactccatgtaccacgcccaacagtactac
agtgacatcacagaggtggaggcgtggcttagcgagcaggaactgcacatgatgaacgag
gagaaaggaaaggatgaagcgagcactctgcagctgctgaagaaacatctggcgctggag
cagaccatcgatgattacgctgaaaccatcggcctcctgtcacagcagtgcagacagctg
ctggaaatctgccatcctgacagtgagcagatcagtaaacgtcagtctcagatcgaccgg
ctctacgtctctctgaaggacctggtggacgagaggaagtgccggctggagcagcagtac
tggctcttccagctgaaccgagaggtggatgaactggagcagtggatcgccgagagagag
atcagcgctagttccaccgaactcggccaggactacgagcacgtcacgatcctgcaggag
aacttcagcgcgttctcttcagaaactggaggtgtgggtcaggagcgagtgttagccatt
aatcagatggtggacgagctgatcgattacggtcacgcagacgccgccgtcatcgccgag
tggaaggacggagtgaacgagtcgtgggcggagctgatggagctgatggagacgagagcg
cagatgctcgcggcttcacatcaactccacaaattcttctccgactgcagagaggtgatg
acacaggtagaagataaatacagaagattaccagaagtgagagatcagaaggacggaacc
accaacaccagctcactgcagagactcatgagcacattcgaacatgacattcagctcctg
gttaaccaggtcagacaattacaggagagcgccgctcaactccgaaccatctacgctggg
gagagggcggatgccatcgccatgcaggaacatgaagtgatgcaggcctggaaggagctg
ctcatttgctgcgaggagtgccggctgcagatcaccacggcgaccgacaaactgcgtttt
ttcgggctggtgcgagatcagctgatgtggatggacagcatcatctgtcagatcggaatg
ggagagaaacccagggatgtttcctcggtggaggtgctgatgaactaccaccagagcttg
aagaacgaggtggaggctcggaacacgagcatggtgcagtgtatcgagatgggaagaaca
ctcctcgcttcaaggaacccagcgtcagaggagattcaggagaaactggagagagttctg
tctaagcagaaggagctgatggagaaatgggataaacactgggaggaactgcagcacatg
ctggaggtgcaccagtttgctcaggaggcggtggtggccgagtcctggctctcggctcag
gaaacgttcttggagagtaaggagctggggagcagcgtggacgaggtggagcagctgatc
cgtcgacatgaagccttcaggaaagcagcagcagcgtgggaggagagaatcagctccctg
agacgcctcactacgtgccagagtgcaacaggacaaacaacaatcgtggagaagttaaag
gcggagcagagtaagctccctccgacgcctctgctcggccgcaaggtttttctggaccct
caggagtcgtctccggcccgaagcagcccgtcatcactgcacaaacagactatttatgaa
catggtgacctctgggccgagagaaaccaccctcacccgtccccgccctcgccttctctg
agactcagctcacccgtcgcaccatactctccggtgatggacagatcggccacgcttcga
gttcccgaggtgaggcacgtcagagttttgggagtcgctgctggtcttggaatggcctct
gagcctaaaaccactctgacaaaaccagcgcaggatatagtgcgccccctggtggacgtg
aacgtcatggcggaggtggtgctacaggaaccggggcgagccaggaacgtgacagagcag
caggttcagcagcaccatcctcctcagaaggactcgaggatcgagcggcagctttctaac
gagcagctgatccaggccaggagagacgaactaccacaggaagtgtggagggaacgagcc
gagcgagagaagagactggagagacagacctccagcgaacaggaaatctacgacccccgg
agacgagatcgtcaacgactagagagacaggagagcagcgagcacgatacaggacgggat
cagtcagacaggcggtccggaggaggggagaaacgatctacattagctgatatagtggag
cagcttcaggaaagagaagcagctcaggctcgaggtgagatcccacgtgttcctaacgga
gtccaggacaagtcgtctcgtccggaccgcccccgagcacgggaccgccccaaaccacgg
aggcgacctcgacccagagacggagctcagggggaaacgcggcgctcactatccgccccg
gcacagagcggcccctccgcaccccagccgccctcccatcaggctcagcgcgagggcttc
ctgttccgcaaactggacatcgagagccagaagaagagctccaacagatcctgggtgaac
ctgtactgcgtgctgaataaaggagagctgggattctacaaggactcgaagaacacggcg
tccacgtacaacaacgaacctcgactggttctgagcagctgttcctgcgatattaacctc
ggatacaagaagaagaaaaacgtcttcacgctcaaaactaaagatggaagtgagtacctg
ttccacgctaaagatgaggacgatctgaagggctggatctccagcatcagcacgagcatc
accgaacacgacgacatctctaaatatggtcagtctcaccccactacctcatctacagac
gaggggacgcgcagagaggggagcagggccgagaaatcggacagagcctcggtacgctcg
gacaagggagagaaaatggagaagaagagcagcaagaagaaatga
DBGET
integrated database retrieval system
