Trichomycterus rosablanca: 134323508
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Entry
134323508 CDS
T09921
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
trn
Trichomycterus rosablanca
Pathway
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134323508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134323508
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134323508
Intermediate filaments
Intermediate filament-binding proteins
134323508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
PH_11
IL32
SLATT_6
Motif
Other DBs
NCBI-GeneID:
134323508
NCBI-ProteinID:
XP_062861105
LinkDB
All DBs
Position
11:5794104..5875875
Genome browser
AA seq
1874 aa
AA seq
DB search
MKEGKRIVAQKRLYSAGINDKLLEVKDEWKRLEDQAAMRLGHLQEALDFFQFSAEMDDQL
AWLQDAYRLVSSDDFGHDEFSTQSLLKKHYRVREEVDKHRKNVVALRKHATTLPMHYGEM
EEVKERIQEVERVYGEVAEVAVMREQWLNDALAVYRMFSEVNACELWIDEKEKWLNNMEV
PERLEDVEVVAHRFESLDQEMNSLMGRILDVNQIVQQLLDGGHPSSSEVRGCQDHLNSRW
NRMVELVEQKKDHLDSILRIQNYLLESSEIKSQIQEKRKAIDATQYSGSDLGSVLALQRR
LSTMEGALAVLEPKLIHLQQEAEELATSQPHKAEEILIPFDGVSVEWDELKRTLQGCEDS
LTVAGRLQQFIQDLDSFLTWMVQKQTEAASSELPESLEEAEKLINLHAALNEEIQSYEED
YERLQSVRELLDGEETQLANAALHQWLQKLSAGWNKLLQMWESRRDELVQAHIYHLFMKD
VKQAESFLNNQESSLAHVELPTTVETVEAAIKKHKEFSTAMELNLHRIEAVIEAGESLIS
QSNIYSERIRERVDLLITRGNQNRDLAQDWLRKLNHQWALQRFLQDCHELGDWVMEKMLT
ARDSVCNDLQQLHKKWLKHQAFMAELSQNKEWLDRIQKDGERLMEEKPELSEMVQQKLNE
IRECWLELENSAQIKALQLFENDRAQQISQNYTRLNERVQELEVQLCHLDRGNDLTTVNK
QLKKLQMMERQMEEWCKDVCHLQQQSVSLPDECLMLDAVSEQQTEVESRIVRLIEPLKER
RRILLASKEVHQVRRDLQDEILWVQERIPLAMSQETGSTLQAVQQLMKKNQSLQRELEGH
CGRVEEVMERATVFAAVRTSEAECISGLIEGLHNLWGELWAETERRQVQLDSMYHAQQYY
SDITEVEAWLSEQELHMMNEEKGKDEASTLQLLKKHLALEQTIDDYAETIGLLSQQCRQL
LEICHPDSEQISKRQSQIDRLYVSLKDLVDERKCRLEQQYWLFQLNREVDELEQWIAERE
ISASSTELGQDYEHVTILQENFSAFSSETGGVGQERVLAINQMVDELIDYGHADAAVIAE
WKDGVNESWAELMELMETRAQMLAASHQLHKFFSDCREVMTQVEDKYRRLPEVRDQKDGT
TNTSSLQRLMSTFEHDIQLLVNQVRQLQESAAQLRTIYAGERADAIAMQEHEVMQAWKEL
LICCEECRLQITTATDKLRFFGLVRDQLMWMDSIICQIGMGEKPRDVSSVEVLMNYHQSL
KNEVEARNTSMVQCIEMGRTLLASRNPASEEIQEKLERVLSKQKELMEKWDKHWEELQHM
LEVHQFAQEAVVAESWLSAQETFLESKELGSSVDEVEQLIRRHEAFRKAAAAWEERISSL
RRLTTCQSATGQTTIVEKLKAEQSKLPPTPLLGRKVFLDPQESSPARSSPSSLHKQTIYE
HGDLWAERNHPHPSPPSPSLRLSSPVAPYSPVMDRSATLRVPEVRHVRVLGVAAGLGMAS
EPKTTLTKPAQDIVRPLVDVNVMAEVVLQEPGRARNVTEQQVQQHHPPQKDSRIERQLSN
EQLIQARRDELPQEVWRERAEREKRLERQTSSEQEIYDPRRRDRQRLERQESSEHDTGRD
QSDRRSGGGEKRSTLADIVEQLQEREAAQARGEIPRVPNGVQDKSSRPDRPRARDRPKPR
RRPRPRDGAQGETRRSLSAPAQSGPSAPQPPSHQAQREGFLFRKLDIESQKKSSNRSWVN
LYCVLNKGELGFYKDSKNTASTYNNEPRLVLSSCSCDINLGYKKKKNVFTLKTKDGSEYL
FHAKDEDDLKGWISSISTSITEHDDISKYGQSHPTTSSTDEGTRREGSRAEKSDRASVRS
DKGEKMEKKSSKKK
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggggaagcggatagtcgctcagaaacgcctttacagcgccggaatcaacgac
aaactgctggaggtgaaggatgagtggaaacggctggaggaccaggccgcgatgaggctc
ggccacctccaggaggcgctggatttcttccagttcagcgcagaaatggacgatcagcta
gcctggctccaggacgcctacaggctggtgtccagcgatgattttggacatgatgagttt
tccacgcagtcgctgttgaagaagcattaccgtgtccgagaggaggtggacaaacatcgg
aagaatgtggtagcgctgcgtaaacacgccaccacactgcccatgcactatggtgagatg
gaggaggtgaaggagcggatacaggaagtggagcgggtgtacggggaggtggcggaggta
gcggtgatgagggagcagtggctgaacgatgcgctggctgtgtatcgaatgttcagtgaa
gttaacgcctgtgaactgtggatcgacgaaaaggaaaaatggctgaacaacatggaggta
cctgagagactggaggacgtggaggtggtcgctcacaggtttgagagcttggaccaggag
atgaacagtctgatgggaaggattttggatgtgaatcagattgtacagcagttgttggat
gggggccatcccagttcttctgaggttcgaggatgtcaggaccaccttaacagcaggtgg
aaccgtatggtggagctggtggagcagaagaaggatcatctggactctattcttcgtatt
caaaactatttgctggaatctagcgagatcaaatctcagattcaggaaaaacgtaaagcc
atcgatgccactcagtactcgggcagcgacctgggcagtgttttagctctacagcgacgt
ttatccaccatggagggcgctctggccgttctagagcccaaactcatccacttacaacag
gaagcagaagaactggcaacctcccagccccataaagccgaggagatcctgattccgttc
gatggcgtgagtgtggagtgggacgaattaaaacgaaccctgcagggatgtgaggactct
ctgaccgtggccggacggctgcagcagttcatccaggacctggactcgttcctcacctgg
atggtgcaaaagcagaccgaggcagcgtccagcgagcttcccgagtctctagaagaggcg
gagaagctgatcaatcttcatgcggcactgaacgaggagatccagagttacgaggaggat
tatgagcggctgcagtcggtcagggagctgctggacggggaggagacacagttagccaac
gcggcgctgcaccagtggctccagaaactgagcgccggctggaacaaactgctgcagatg
tgggagagtcgaagagacgagctggtgcaggcacacatctaccacctgtttatgaaggac
gtcaaacaggccgagtccttcctcaacaaccaggaatcctcattagcacacgtggaactc
ccgaccacggtggagacagtggaagctgccatcaaaaaacataaagaattcagcacggcc
atggagctcaacctgcaccgcatcgaagccgtcatcgaagcaggagagagtctgatcagc
cagagcaacatctactctgaacggatcagagagcgagtggatcttctcatcaccaggggg
aatcagaaccgagacctggctcaggattggctcaggaaactcaaccaccagtgggcgctg
cagagattcctgcaggactgtcatgagttaggtgactgggtaatggagaagatgctaaca
gctcgtgattcggtgtgtaatgatcttcagcagctgcacaagaaatggctgaaacatcag
gccttcatggctgaactttcacagaataaagaatggctggacaggattcagaaggatgga
gaaaggttgatggaggagaagccggagctgagtgagatggtgcagcagaagctgaatgaa
attcgggagtgttggttagaactggagaactctgcacagattaaagctctgcagttgttc
gagaatgaccgggcacagcagatctctcagaactacactcggctgaacgaacgcgtgcag
gaactggaagtacagctgtgtcacctcgaccgcggcaacgacctcaccaccgtcaacaag
cagctcaaaaaactacagatgatggaaagacagatggaggaatggtgtaaggacgtgtgt
catctacagcaacagtccgtctctctaccagacgagtgtttgatgttagacgccgtttcg
gagcagcagaccgaagtcgagtcgaggatcgttcgtctcatcgagccgctcaaggagagg
cggaggatcctgctcgcctccaaggaggttcaccaagtacgacgagacctgcaggacgaa
atcctgtgggtgcaggaacgcatcccgctggccatgtcacaggaaacaggaagcacatta
caagctgtgcaacaactcatgaagaaaaatcagagcctgcagagggagctggagggccac
tgcgggcgtgtagaagaggtgatggagcgagccaccgtgtttgcggccgtacgtacgtcg
gaggcggagtgcataagcgggttaatcgagggtctgcacaatctgtggggggagctgtgg
gccgagacggagcgcaggcaggtgcagctggactccatgtaccacgcccaacagtactac
agtgacatcacagaggtggaggcgtggcttagcgagcaggaactgcacatgatgaacgag
gagaaaggaaaggatgaagcgagcactctgcagctgctgaagaaacatctggcgctggag
cagaccatcgatgattacgctgaaaccatcggcctcctgtcacagcagtgcagacagctg
ctggaaatctgccatcctgacagtgagcagatcagtaaacgtcagtctcagatcgaccgg
ctctacgtctctctgaaggacctggtggacgagaggaagtgccggctggagcagcagtac
tggctcttccagctgaaccgagaggtggatgaactggagcagtggatcgccgagagagag
atcagcgctagttccaccgaactcggccaggactacgagcacgtcacgatcctgcaggag
aacttcagcgcgttctcttcagaaactggaggtgtgggtcaggagcgagtgttagccatt
aatcagatggtggacgagctgatcgattacggtcacgcagacgccgccgtcatcgccgag
tggaaggacggagtgaacgagtcgtgggcggagctgatggagctgatggagacgagagcg
cagatgctcgcggcttcacatcaactccacaaattcttctccgactgcagagaggtgatg
acacaggtagaagataaatacagaagattaccagaagtgagagatcagaaggacggaacc
accaacaccagctcactgcagagactcatgagcacattcgaacatgacattcagctcctg
gttaaccaggtcagacaattacaggagagcgccgctcaactccgaaccatctacgctggg
gagagggcggatgccatcgccatgcaggaacatgaagtgatgcaggcctggaaggagctg
ctcatttgctgcgaggagtgccggctgcagatcaccacggcgaccgacaaactgcgtttt
ttcgggctggtgcgagatcagctgatgtggatggacagcatcatctgtcagatcggaatg
ggagagaaacccagggatgtttcctcggtggaggtgctgatgaactaccaccagagcttg
aagaacgaggtggaggctcggaacacgagcatggtgcagtgtatcgagatgggaagaaca
ctcctcgcttcaaggaacccagcgtcagaggagattcaggagaaactggagagagttctg
tctaagcagaaggagctgatggagaaatgggataaacactgggaggaactgcagcacatg
ctggaggtgcaccagtttgctcaggaggcggtggtggccgagtcctggctctcggctcag
gaaacgttcttggagagtaaggagctggggagcagcgtggacgaggtggagcagctgatc
cgtcgacatgaagccttcaggaaagcagcagcagcgtgggaggagagaatcagctccctg
agacgcctcactacgtgccagagtgcaacaggacaaacaacaatcgtggagaagttaaag
gcggagcagagtaagctccctccgacgcctctgctcggccgcaaggtttttctggaccct
caggagtcgtctccggcccgaagcagcccgtcatcactgcacaaacagactatttatgaa
catggtgacctctgggccgagagaaaccaccctcacccgtccccgccctcgccttctctg
agactcagctcacccgtcgcaccatactctccggtgatggacagatcggccacgcttcga
gttcccgaggtgaggcacgtcagagttttgggagtcgctgctggtcttggaatggcctct
gagcctaaaaccactctgacaaaaccagcgcaggatatagtgcgccccctggtggacgtg
aacgtcatggcggaggtggtgctacaggaaccggggcgagccaggaacgtgacagagcag
caggttcagcagcaccatcctcctcagaaggactcgaggatcgagcggcagctttctaac
gagcagctgatccaggccaggagagacgaactaccacaggaagtgtggagggaacgagcc
gagcgagagaagagactggagagacagacctccagcgaacaggaaatctacgacccccgg
agacgagatcgtcaacgactagagagacaggagagcagcgagcacgatacaggacgggat
cagtcagacaggcggtccggaggaggggagaaacgatctacattagctgatatagtggag
cagcttcaggaaagagaagcagctcaggctcgaggtgagatcccacgtgttcctaacgga
gtccaggacaagtcgtctcgtccggaccgcccccgagcacgggaccgccccaaaccacgg
aggcgacctcgacccagagacggagctcagggggaaacgcggcgctcactatccgccccg
gcacagagcggcccctccgcaccccagccgccctcccatcaggctcagcgcgagggcttc
ctgttccgcaaactggacatcgagagccagaagaagagctccaacagatcctgggtgaac
ctgtactgcgtgctgaataaaggagagctgggattctacaaggactcgaagaacacggcg
tccacgtacaacaacgaacctcgactggttctgagcagctgttcctgcgatattaacctc
ggatacaagaagaagaaaaacgtcttcacgctcaaaactaaagatggaagtgagtacctg
ttccacgctaaagatgaggacgatctgaagggctggatctccagcatcagcacgagcatc
accgaacacgacgacatctctaaatatggtcagtctcaccccactacctcatctacagac
gaggggacgcgcagagaggggagcagggccgagaaatcggacagagcctcggtacgctcg
gacaagggagagaaaatggagaagaagagcagcaagaagaaatga
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integrated database retrieval system
