Trichomycterus rosablanca: 134323510
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Entry
134323510 CDS
T09921
Symbol
abcc8b
Name
(RefSeq) ATP-binding cassette sub-family C member 8
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
trn
Trichomycterus rosablanca
Pathway
trn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134323510 (abcc8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134323510 (abcc8b)
Transporters [BR:
trn02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
134323510 (abcc8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
RsgA_GTPase
ABC_ATPase
AAA_25
nSTAND1
AAA_23
Sigma54_activat
TraD_N
Motif
Other DBs
NCBI-GeneID:
134323510
NCBI-ProteinID:
XP_062861113
LinkDB
All DBs
Position
11:complement(11237061..11271271)
Genome browser
AA seq
1564 aa
AA seq
DB search
MSVRQTPVSNSTLSFCGTDNSSAYKVDNGLLNNGCFLDALGLVPHVFLLFSTFPILFIGW
GSQSSKVHIHHSTWLHFPGHNLRWLLTAILLFVLVCEVAEGIVSDGFNQSLHLHLYMPAG
LGILSAISSIVYYHNIETSNFPKLLLALLIYWILAFVTKTIKFVKYNEHGIGLVQLRFCI
TGLLALLYGLLLMVEINVILRRRYVFFTYPTEVKPPEDLQDLGVRFIQPFVNLLSKSTYW
WINALITSAHKQPIHLKTIGKLPIAMRAITNYQTLRKAFTTQKEQGVIPGRGSQWIWDAL
RRAFGGPLLLSITYRFMADLLGFTGPLCISGIVHYISRDNHTIEPPVKLLGVRFISSQAF
LANGYVLAVLLFLALLLQRTFLQASYYTSIETGIKIRGAIQCKIYNKIMRLSTSNMSMGG
LTGAQICNLVARDTHQLMWFFFLSPNLCAMPVQITIGVILLYYLLGISALIGAAIITVLA
PMQYFVAIQLSRTQKSTLEYSSERLKKTNEMLRGIKLLKLYAWEHIFKSSVENTRKKELT
SLRAFALYTSLSTFMNTAIPITAVLTTFSVHAYVHSSTDTALSPAVAFASLSLFHILVTP
LFLLASVLHSTVKALVSVQKLSEFLTSEEIESGQQAATPTDTNHQSDIKSVYMLQLQASK
LVNRKNKAKEDKKNLPLHDPELNIYDIKEQNICLKIMNGYFTWTQGCPTLSNIDIKVPFG
KLTIIVGQVGCGKSSLLLAALGEMQKISGSVTWNKKRGAVAYASQRSWLLNATIEENILF
DMAPNEKRYKEVIEVCQLQPDIDSLPQGDQTVVGERGIILSGGQRQRISVARALYQQTKV
VFLDDPFSALDIHLSDHLMQEGILKFLRQEKRTVLLVTHKLQYLPHADWIIAMKDGTVQI
QGTLKDIQCAEPELFEQWKTLMNRQDKENAVELKRKSFRRAMYSRDTLATEDEDEDSSGS
TEEDSLAAELRQRTTLPWGSLGTYLRAAGLLLLPLLVLSQFTKHSLMLAIDYWLAYWTSQ
TITARSDTAERNCTSAQDCVHSHAPYLLVFCMLCFLGIVLCLITFLTVEWTGLRVAQQLH
CSLLRIIILAPMRLFETTPLGSILNRFSGDINTIDQHIPVTMECLSRSTLLCVSAVGIIS
YITPVFLIALLPLTITCYFIQKYFRVASRDLQQLEDSTQIPLLSHYSQTIEGLTTIRASR
HEQKFKKRLLECIDANNIASLFLTVANRWLEVRMEYIGACVVLVAAVASISSALYSKLSA
GLVGLGLTYALMVSNYLNWMVRNLADMEVQLGSVKRISSLLNTEPENYSGEMNPAQVPAG
WPRYGEIKIENLSVRYNSSLKPVLKRVNAHIKPGQKVGICGRTGSGKSSFSLALFRMVDT
CEGRIIIDGIDIAKLPLQTLRSKFSIILQDPILFSGTIRFNLDPEQKATDRMLWEALEIA
QLTPLVEALAEGLDAMVTEGGENFSQGQRQLFCLARAFVRKSSILIMDEATASIDMATES
ILQKVVLTAFADRTVVNIAHRVHTILGSDVVIVMKRGSILEYDRPDVLLEKKDSVFYSFV
RADK
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaagacagactcctgtatctaacagcaccctgtcgttctgtggtactgataat
tcatctgcgtataaggtggataatgggcttttgaataatggctgttttttggatgctctg
gggctcgtaccacacgtcttcctactgttcagcacctttcccatcctgttcattggttgg
ggcagccagagctcaaaggttcacatccaccatagcacatggcttcattttccgggccac
aacctgcgctggctgctaacagccattctgctgtttgtgttggtgtgtgaggttgctgag
gggattgtttcagatgggtttaaccagtctctccatctccatctctacatgcctgctggg
ctgggaattctgtctgctataagctccatagtatattaccacaacatagagacgtccaac
tttccaaaactactgctagctctgttaatctactggattctggcatttgtcactaaaacc
atcaagtttgttaagtacaatgagcatggcattggtctggtgcagctgcgattctgcatc
acaggtcttctggctttactctacggcctgctgctgatggtggagatcaacgttattctg
cgcaggcgctatgtattctttacttatccaaccgaagtgaagcctcctgaggacctacag
gaccttggtgtgaggttcatccagccattcgtcaatctgctttcaaaaagcacatactgg
tggataaatgcattaatcacatctgcccacaagcagcccatccacctaaaaaccattggc
aagctgcctatagccatgagagctattactaactaccagacgttacgcaaagccttcact
acacagaaggagcaaggagtgatccctggacgaggctcacaatggatttgggatgctcta
agacgggcatttggaggccctctgcttcttagcatcacctaccgattcatggcagacctg
ctgggcttcactgggccactctgcatctccggcatcgtccattacatcagccgtgataat
cataccatagagccaccggtcaagctgcttggggtgcgttttatttcctctcaggcattt
ttagctaacggctatgtgctagctgtgctgctgttcctggctcttctcctacaaagaacg
tttctgcaggcttcctactacacctccatagagactggcattaagatcagaggagccatc
cagtgtaagatctacaacaagatcatgcgtttgagcacttctaacatgtcgatgggaggc
ttgaccggtgctcaaatctgtaatttggtggccagagacactcaccagctcatgtggttc
ttctttcttagtcccaacttgtgtgccatgccagtccagatcactattggtgtaattctg
ttgtactacctgttaggcatcagtgctctaattggagcagcaataatcactgttctcgca
ccgatgcagtactttgtggccatacagctttcacgaacccagaagagcacactagagtac
tccagtgaacgactgaaaaagactaatgagatgttgagaggtattaagctgttgaaacta
tatgcatgggagcatatctttaaatcaagtgtcgagaacacaaggaagaaagagctgacc
agtcttcgtgcttttgctctctacacttctctctcaacttttatgaacactgccattccg
attacagcagttcttacaacattttctgtacacgcctatgtacacagttctactgatact
gctctctctcccgctgtggcttttgcttcactatcactctttcacatcttggttacgccg
ctcttccttttggctagtgtcctacactctactgttaaagctcttgtaagtgtacagaaa
ctaagtgaattcttgaccagtgaagagatagaaagtggccagcaggccgccacaccaact
gatacaaaccaccaaagtgacatcaagtcagtgtacatgctgcagctacaggcttcaaaa
ctggtcaaccgaaagaacaaagccaaagaggacaagaagaacttaccactgcatgatcca
gaactcaacatttatgacataaaggagcaaaatatttgtctcaagattatgaatggctat
ttcacatggacacagggatgcccgactctcagcaacatagacataaaggttccatttggt
aaattgacgataatcgtggggcaggtaggatgtggtaaatcctctctgctgttggctgca
ctgggagaaatgcagaagatctccggaagtgtcacatggaacaagaagagaggtgcagtg
gcgtatgcttcacagagatcgtggctcctcaatgctactatagaggagaatatccttttc
gacatggctccaaatgaaaagaggtataaggaagtgatcgaggtgtgccagctccagcct
gatattgactcacttccacaaggagaccagactgtggttggagaaaggggtattattctg
tccgggggtcagcgacagcgcatcagtgtagctcgagctctatatcagcaaacaaaagta
gtgttcctggatgacccattctcagcgcttgatatccacctgagtgaccacctgatgcag
gagggcatcctgaagtttctcagacaggagaagaggaccgtgttgctggttactcacaag
cttcagtatttaccacatgcagactggatcatagccatgaaggacgggacagtacagata
cagggcacgttaaaggacatccagtgtgctgagcctgaactatttgaacaatggaagacc
ctgatgaacagacaagacaaggagaatgctgtagaactgaagaggaagagtttcaggaga
gccatgtactccagagataccctagccactgaggatgaggatgaagatagttctggaagt
acagaagaagacagcctggcagcagagctgcgtcagaggaccacactgccttggggatcg
ttaggtacctacctgagagctgctggtctcctgctgctacctctgcttgtcctctctcag
ttcaccaaacactcgctcatgctggctatagattactggctggcttactggacgtctcag
acaatcactgctcgatcagacactgcagagagaaactgtacgtctgcacaggactgtgtg
cacagtcacgctccgtatctgctggtgttctgtatgttgtgttttttggggatcgtgctg
tgtttgatcacatttctgacggtggaatggacgggtctgagagtcgctcaacaactacac
tgtagtcttctacgcatcatcatcctcgctcccatgaggttgtttgaaacgactcctctt
ggcagtattcttaaccgattctctggcgacatcaacacaattgatcagcacatcccggtc
actatggagtgtctgagccgttccactctgctgtgtgtatcggcagtgggtattatctcc
tacatcacaccagtctttctcatcgctctgcttcctctgaccatcacctgctactttatt
cagaaatacttcagggtggcatccagggatttacagcagttagaagacagcactcagatt
cctcttctctctcactattcccagactatagagggtctaactaccatcagagcatccaga
catgagcaaaagtttaagaaaaggcttttggaatgcattgatgccaacaacattgcttca
ctttttctgactgtggctaatcgctggcttgaagttcgcatggagtatattggagcatgt
gtggtgctggtagcagcagtagcctccatcagcagtgcattatatagtaaactgtcagca
ggattagtgggacttggcctgacatacgctctcatggtgtcaaactacctgaactggatg
gtgcgtaacctggctgatatggaggtgcagcttggctctgtaaaacgaatcagcagtttg
ttaaacacagagcctgagaactacagtggggaaatgaacccagctcaggttccagcagga
tggcccagatatggtgagatcaagatcgagaacctgagtgtaagatataatagcagcctg
aagcctgtcttaaagcgtgtcaatgctcacattaaacccggacaaaaggtgggaatttgc
ggacgcaccggaagtggaaaatcttccttttcactggctcttttcagaatggtggacaca
tgcgaaggtcggatcattatagatggtattgatatcgctaaacttccccttcaaaccctg
cgctccaaattttcaattattctacaagatccaattttattcagtggaacaatccggttt
aatttggatccagagcaaaaggcaacagaccgaatgctgtgggaagctctggagatcgca
cagctcacacctctggtagaggctttagctgaaggactagatgccatggtgactgaggga
ggagagaatttcagtcagggacagagacaactcttctgtttggccagagcatttgtcagg
aagagcagcatcctaatcatggacgaagcaacagcatctattgatatggccactgaaagt
attctacaaaaagtggttctgactgcgtttgcagatcggacagtggtaaacatagctcac
cgtgtgcacaccatcctgggttcagatgttgtgattgtgatgaagcgaggctcgattctg
gagtacgacaggcctgatgtcctgctagaaaagaaagatagtgtattttactccttcgtc
cgagcagacaaataa
DBGET
integrated database retrieval system
