Trichomycterus rosablanca: 134323608
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Entry
134323608 CDS
T09921
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
trn
Trichomycterus rosablanca
Pathway
trn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134323608 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134323608 (chrna5)
Ion channels [BR:
trn04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
134323608 (chrna5)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF417
Motif
Other DBs
NCBI-GeneID:
134323608
NCBI-ProteinID:
XP_062861229
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Position
11:12320636..12332159
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AA seq
468 aa
AA seq
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MLQTEVTFCLVQLACSCLLCCFCFCSILAPPKLSSYAKTEDKLLKDLFSNYQKWVRPVEH
LNGTVRVKFRLAITQLVDVDEKNQLMTTNVWMKQEWVDTKLRWNPKHYLGITSIRVPSDS
IWIPDIVLFDNSDGNFEATATKAVVKYDGTISWTPPANYKSACTIDVTFFPFDLQNCSMK
FGSWTYDGSQVDIILKDVHVDKRDYFDNGEWEIVTATGSRGLRMDSTGSYPFITYSFIIR
RLPLFYTLFLIIPCIGLSFLTVLVFYLPSNCGEKISLCTSVLVSLTVFLLVIEEIIPSSS
KAIPLIGEYLVFTMIFVTLSIIITVFAINIHHRSSSTHNDMAPWVRRIFLHSLPKLLCMR
SHVDRYASSGTAELNGGKSSKPGGNHLLSSAHNLQSALDSIRYITLHVVKENQVREVVQD
WKFVAQVLDRVFLWAFLSVSVLGSALLFIPVIYKWANIIVPNYADNSS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttacagactgaagtcacattttgtctggttcagctagcctgctcctgcctcctctgc
tgtttttgtttttgttcaatcttagctccaccaaagctgtcttcatatgcaaaaactgag
gacaagcttctcaaagatctgttcagcaactaccagaaatgggtgcgaccagtggaacat
cttaatgggacagtacgggttaaattcagattggccatcacgcagctggtagatgtggat
gagaagaaccagctgatgaccaccaatgtctggatgaagcaggaatgggttgacacaaag
ctgagatggaaccctaaacactacctgggtataacatctattagagtgccatcagactcc
atctggattcctgacattgttctctttgataattcagatggaaattttgaggccacagct
actaaagcagtggtaaagtatgatggcacgatctcctggacaccccctgctaactacaaa
tctgcctgcacaatagatgttaccttctttccttttgatcttcagaactgctccatgaag
tttggttcctggacctatgatggctcacaggtagacataatcctaaaggacgtccatgtg
gataagcgagactactttgataatggtgaatgggagattgtaacagctacaggcagtcga
ggtttaaggatggacagtactggttcctatcccttcatcacttactccttcatcatccga
cgccttccactgttttacacgctcttccttatcattccttgtattggactgtcctttttg
actgtgctggttttctaccttccttctaactgtggagagaagatctctctttgtacttca
gttctcgtctcacttactgtctttctcttagtgatagaggagatcatcccgtcctcgtcc
aaggcgattccactcattggggagtatctggtcttcactatgatctttgtcacattgtcc
atcatcatcacagtctttgccatcaacattcaccaccgctcttcgtccacgcataacgac
atggcaccctgggtccgccgcatcttcctacacagtctgcccaagcttctctgcatgcgt
agccatgtggaccgctacgcctcgtcaggaacagcagaattaaatggtggaaagagttca
aaacctgggggcaaccatctgcttagttcagcacacaatctgcagtcggcactggattca
attagatacatcactcttcatgtggtaaaggagaaccaagtcagagaggttgttcaagac
tggaagtttgtggctcaagtgctggatcgagttttcctgtgggccttcttatcagtctct
gtgcttggttctgctctcctctttattcctgttatttataaatgggccaatattatcgtt
ccaaactatgctgataacagcagctga
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