Trichomycterus rosablanca: 134323637
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Entry
134323637 CDS
T09921
Symbol
nob1
Name
(RefSeq) RNA-binding protein NOB1
KO
K11883
RNA-binding protein NOB1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134323637 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134323637 (nob1)
03051 Proteasome [BR:
trn03051
]
134323637 (nob1)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
134323637 (nob1)
Proteasome [BR:
trn03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
134323637 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
DZR
Zn_ribbon_15
DZR_2
HypA
CENP-B_dimeris
Zn_ribbon_8
ANAPC15
Motif
Other DBs
NCBI-GeneID:
134323637
NCBI-ProteinID:
XP_062861288
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All DBs
Position
11:complement(17520861..17529695)
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AA seq
423 aa
AA seq
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MVGTMVDHVVADAGAFLKNAALHEIGKTIYTLKDVVNEIRDKQTKKNLAFLPYQLNFKEP
FPEHVRFVTEFSKKTGDYPSLSSTDIKVLALTYQLELENVGGDHLKKEPEVQVEVCNTQR
HPEAPVNVAGFHLPSKDSTKSMVPDVQNAALSYEYKPAESSEFNSFQFWREPVASIDDDL
LKLVLETTPNELKEDEENEEEEGDEEDEDEEDEDDGGGWITPSNIKKVQMEVGNWQPSED
VKVGCVTTDFAMQNVLIQIGLNVLSVNGMLIKRTRNYILRCHACFKTTTDMNKSFCPNCG
NSTLKKIAVTLNADGSMQMHFSSNPKVLNPKGKRYSLPNPHGGKHSTNPHLVEDQHFPQQ
RLSRKARQKTDVFDPDYIAGGSPFSQHDIYSRAANLHLRDAQCGGGRLRANPNASRKKFV
KKK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggttggtactatggtggaccatgttgtcgccgatgccggggcttttctcaaaaacgcc
gctttacatgaaattggaaaaactatctacactctgaaggatgtcgtgaatgaaattcgg
gataaacaaacaaagaagaacttggcttttttaccctaccaactaaacttcaaagaacct
tttccagaacatgtacgattcgttactgagttttcgaaaaagactggagactatcccagt
ctgtcttcaactgacattaaagtgttggcgctgacataccagcttgaattggagaatgtt
gggggtgatcacttgaaaaaagaaccagaagtacaggttgaggtatgcaacacacagagg
catccggaagcacccgttaatgttgctggattccaccttccttctaaagactctactaaa
agcatggttcctgatgttcagaatgctgcattgtcttatgaatataaacctgctgagagc
tcagagtttaacagcttccagttttggagggaaccagtagccagcatagatgatgactta
ctcaaactggttttagaaacgactcctaacgaattgaaggaagatgaggaaaatgaggag
gaagaaggggacgaagaggatgaagatgaggaggacgaggatgacggaggtggctggatc
actcccagtaatataaaaaaagtccagatggaagttggtaattggcagccctctgaagat
gtgaaagtgggctgtgtgaccacagattttgctatgcagaatgtacttattcagattggt
ctaaacgtgctctctgtaaatggaatgcttatcaaacgtacaagaaactacatcctccgc
tgccatgcctgcttcaagacaacaacagatatgaacaaatctttttgtcccaattgtgga
aacagcacacttaagaaaattgcagtgaccctcaatgcggacggcagcatgcagatgcac
ttctccagcaaccctaaagtgcttaatcccaaaggcaagaggtactccttaccaaaccca
cacggtggaaaacattccaccaatccacatctggtggaagatcagcatttccctcagcag
agattgtcacggaaagcacggcagaagacggatgtattcgacccagactacattgcagga
gggtctccgttctcacagcacgacatttacagccgagcagcaaacctacacctgcgtgac
gctcagtgtggaggagggcggctgcgtgctaatcctaatgcttctcgcaagaagtttgtt
aagaaaaagtga
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