Trichomycterus rosablanca: 134323667
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Entry
134323667 CDS
T09921
Symbol
nectin1b
Name
(RefSeq) nectin cell adhesion molecule 1b
KO
K06081
poliovirus receptor-related protein 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03266
Virion - Herpesvirus
trn04514
Cell adhesion molecule (CAM) interaction
trn04517
IgSF CAM signaling
trn04520
Adherens junction
trn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
134323667 (nectin1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134323667 (nectin1b)
04517 IgSF CAM signaling
134323667 (nectin1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
134323667 (nectin1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134323667 (nectin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134323667 (nectin1b)
04090 CD molecules [BR:
trn04090
]
134323667 (nectin1b)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
Nectin family
134323667 (nectin1b)
CD molecules [BR:
trn04090
]
Proteins
134323667 (nectin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
Ig_2
V-set
I-set
ig
Ig_PVRIG
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
134323667
NCBI-ProteinID:
XP_062861341
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All DBs
Position
11:19797064..19991536
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AA seq
500 aa
AA seq
DB search
MAMLAKLWILVLVLLNAPLGHSQSVVMEAVKSGFVGTTVELRCLFNNSKPPVKISQVTWQ
KFHNNTKQNVAIANPVLGVSVLPAFKDRVSFKQSAVRLQTPSLEDTTIIISNLRLSDEAA
YICEYTTFPAGNRENMVNLTVYARPITHMTLTTPTIIAQGQKHKMKVATCLSANGKPPSD
IKWETKLKGEAVIQETHNPNGTITLRSDYMLIPSRESDRQKLTCIITYRTERITDSVILN
VQYEPEVKIEGFDGNWYLNRQNVKLTCNADANPPVTGYQWKMLNGTLPKNVEVKNNTLLF
RAPVTYDLGGTYVCDATNGIGTRSGLVEVNVTEFPHQSPTGSPWGRANHHTSNAAIWGGV
GGLAALAVAVGLLIFFLRRRQRTFKGDYSTKKHVFGNGYSKAGSVPPHPPVPKNLQYPDD
SDDEKKPAQIGGPGAFEGTERDFDGNSEDLKRPYFTVDESESHDYDERTLAFQYDPEPEI
ADDMVSQTDGSVISKKEWYV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcttgctaagctttggatactcgtgctggttcttctgaacgcaccgctggga
cacagtcagtctgtagtgatggaagctgttaaatcgggcttcgtgggtactactgtggag
ctgcgctgcctcttcaataacagcaaacccccagtgaagatttcacaagtcacctggcag
aaatttcacaacaacaccaagcagaacgtggccattgccaacccggtcctcggcgtctct
gtgcttcccgccttcaaggaccgtgtgagctttaagcaatcggcggtgcgcctgcagacc
ccctcgctggaggatactacaatcatcattagcaatttacgcctctctgatgaggctgct
tacatctgcgagtacaccacgtttcctgcgggaaacagagagaacatggtcaacctcacc
gtatatgcacgccccataacccacatgaccctgacaacacccaccatcattgcgcagggt
cagaagcacaagatgaaggtggctacatgcctttcggcaaatggcaagccacccagtgat
atcaagtgggagaccaagctgaagggcgaagccgtgatccaggagacacacaaccccaac
ggcactatcaccttgcgcagcgactacatgctcattccgagccgtgagagcgatcgccag
aagctcacctgtatcatcacctaccgcaccgagcgaattaccgacagcgtcatccttaac
gttcagtatgagcctgaagtcaaaatcgaaggttttgatgggaactggtacctaaacaga
caaaacgtgaaactcacctgcaatgcagatgccaatccgcctgtcaccggctaccagtgg
aaaatgttgaatggaactctgcctaaaaatgtggaggtcaaaaacaacacactgctcttc
agggcgcctgtgacatacgatctgggtggcacttacgtgtgcgacgctaccaacggcatt
ggcactcgttctggcctggtggaggtcaacgtgacagaattccctcaccaatcgcctacc
ggtagcccatggggacgagcgaatcatcacacttccaacgccgccatttggggtggcgtg
ggcggcctggctgccctggccgtcgccgtcgggttgctcatcttcttcctccgtcgccgt
cagcgcaccttcaagggagactacagcaccaagaagcacgttttcggcaatggctacagc
aaggccggctccgtgcccccgcacccaccagtccccaagaacctgcaatacccagacgac
tcggacgacgagaagaagcccgcacagatcggtgggcccggagcattcgagggcacggag
cgcgattttgacggcaactccgaagatctcaagaggccgtatttcaccgtagacgagagc
gagagccacgattatgatgagcggactctcgctttccagtacgacccggagcctgaaatc
gccgatgacatggtgtcccaaactgacggctccgtcatttcaaagaaagagtggtatgtg
tag
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