Trichomycterus rosablanca: 134323682
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Entry
134323682 CDS
T09921
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134323682 (chd2)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134323682 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
134323682
NCBI-ProteinID:
XP_062861370
LinkDB
All DBs
Position
11:complement(23118668..23187894)
Genome browser
AA seq
1793 aa
AA seq
DB search
MLKNKDKKDGDDASGHSNASSNSASEESNHLGSESGSQSGCEHVGERAPSHHSESNSSSE
SESHSESGSDSSGSKSQHPNEEIEAKRVKKKDIADVKKMWEEHPDVYGVRRSNRSRQEPA
RLNIGAEGSSGSESESPKRRVSRKKKKENTWNDDDDSVDEDDEENGSSSDSEPQGKKVRS
RRLPARRPQTKSSKSKQAQKGRKGRKQESSDEDEDEDDDDDDEDTPKRQTRRRTATKVSY
KEDQHDFETDSDDLIEMAEGAEEVQDDDSETIEKVMDTRTGRKGATGATTTLYAVEENGD
PGADFDPEKDEGETLFLIKWKGWSYIHNTWESLDSLTQQKVKGMKKLENFKKKNDELNAW
LRKASPEDLEFYNCQQELTIDLNKQFHIVERVIAVKTGKLQEPSDFPSHKTSSNEPEYLC
KWMGLPYAECTWEDGALLGKKFQSCIDSFNNRNNSKTMPSKDCKVLKQRPRFVPLKKQPS
FIGDENLQLRDYQLAGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGP
FLLVVPLSTLTSWQREWATWAPDMNVVVYLGDVMSRKTIRDYEWIHQQTKRIKFTTLLTT
YEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNSLKE
LWSLLHFLMPDKFELWEDFEDKHGMGRDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQ
ILRVDMSAQQKQYYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHSFLIKQSEDAE
HENSQDHLQALVRGSGKLVLLNKLLTRLRERGNRVLIFSQMVRMLDILADYLTKRRYPFQ
RLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDL
QAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDNSS
GNSNTNPFNKEELAAILKFGAEELFKEPEGEELEPQEMDIEEILRLAETRESDQGSSATD
ELLSQFKVANFTMDETPELDEKPVRDWQEIIPEDQRRQVEEEEKQKEMEDIYMLPRSRSS
NKRAQMNDSDSDVGSKLKLKGHSSGSESETDDSDDDKKPKRRGRPRARKNNVEGFTDAEI
RRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELLHTTCVTAIQEHEEQMKENP
TEAKGPGKRRGVNIKISGVQVNAKSIIQHEEEFEPLHKAISVNPAERSRFQLSCRVKVPH
FDVDWTVQDDAQLLLGIFEHGYGNWDQIKTDPELKLADKILPDEPDKKPQAKQLQIRADY
LLKMLKKEQDTVNTSKTEEVTIVKKRKPRAKKEKPQKDEIINEISSPRLSEHTSEEGEVK
DDGAEKSPTKKKPKKKDNKENKEKQGAQKKNKVGDKDKKRPKIKKEKVKSAAKGKKAQGP
VHITAGSEPVPIGEEDDELDQETFSICKERMRPVKKALKQLDKPDECLSVQEQLQHTRTC
LLKIGDRITECLKYYSDPEHVKTWRRNLWIFVSKFTEFGAKKLHKLYKMAQKKRSQEEEK
EPKKKDDSAKKKPFRPEPSGSSRDSTGTQASTKAHLSGPSSHSHHRESYNQNKRHFPNDA
RGDWQRDRKYNYPGNSNQPWQGDRHHPYDRYKDHHYGDRRPHSDSYRSGGGFRNPSSPRK
RPYDQYNNDREHRGHRDYYNRHPDPKRRRSDEYRSPNYHQGAGGGGGYSQDFRRMPDHRG
NQGPDHYRPFHPDKPPPMLDPRSPQAPFESVSPMERTAEPKPSPDVNWNNRKT
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaataaagacaaaaaagacggagacgatgcttcgggccatagcaatgcttca
agcaactctgcctcggaggagtcaaaccacttgggctcggagtcaggaagccagtcgggg
tgtgagcacgtcggcgaacgagctccatcccaccattcagagtctaacagctcatccgag
tcagagagccactcagaatcaggcagcgattcatctggctccaagtcccaacatcccaac
gaagagatcgaagcaaaacgggtcaagaaaaaagacattgctgatgtaaagaagatgtgg
gaggaacatccagatgtttatggtgttagaaggtccaataggagcagacaggagccagct
cgtctgaacattggggcagagggcagcagtgggtctgagagtgaaagtcctaaaagaaga
gtgtcacggaagaagaaaaaagaaaatacctggaatgatgatgatgactcggtcgacgag
gatgatgaggaaaatggaagcagttcagacagtgagccgcaaggaaaaaaagttagatcc
agacgacttcctgctagaaggccacagaccaaatcatccaaaagtaagcaggctcaaaaa
gggcggaaaggcagaaagcaggagtcatcggacgaggatgaggatgaagacgacgacgac
gatgatgaggatactccaaagagacaaactcgacgaagaacagcaactaaagtcagctat
aaagaagaccagcatgattttgagactgattctgatgaccttattgagatggctgaagga
gcagaagaagtgcaggatgatgacagtgagaccatcgaaaaggtcatggacactaggact
ggccggaaaggagctactggagctaccaccacactgtatgctgtggaagaaaacggagac
cctggagcagattttgacccagagaaggatgaaggtgagacgctgttcttgatcaaatgg
aagggctggtcctatatccacaacacatgggaaagtctggactcactcactcagcagaag
gtcaagggcatgaagaagctggagaactttaaaaagaagaatgatgagctcaatgcttgg
ttgagaaaagcatcacctgaagatttagagttttacaactgtcaacaggaattaaccatt
gatctgaacaagcagttccatatcgtggagagagttatcgctgtaaaaacaggaaagtta
caagaaccttctgattttccatctcataagacttcatccaatgagccagagtacttgtgt
aagtggatgggattgccctatgcagagtgcacttgggaagatggtgcattattggggaaa
aagtttcagtcatgcatagatagctttaacaacagaaacaactcaaagaccatgccctca
aaagactgtaaggtgttaaaacagaggcccagatttgtgccactgaagaagcagccctct
ttcatcggtgatgagaacttgcagctgagggattaccagttagctggggtgaactggctg
gcacactcgtggtgcaggtgcaacagtgtgatcttggctgatgagatgggcctgggaaaa
accatccagaccatttcattcctttcctacctgtttcatcagcaccagctctatggaccc
tttctcctggtcgtgcccctctccactcttacctcctggcagcgcgagtgggccacctgg
gctcctgacatgaacgttgtggtctacctgggggacgtcatgagcagaaagacgatccga
gattacgagtggattcatcagcaaactaaacggataaagttcaccacacttttaaccacg
tatgagattctgctgaaagataagggtgttttggggaacataaactgggcctttcttggg
gtagatgaggcccaccgactgaagaatgatgactcgctgctatataaaacactgattgat
ttcagatccaaccacaggctgcttattacaggaactccactgcagaactcactcaaagag
ctgtggtccctcctgcactttctcatgcctgacaaatttgagttgtgggaggatttcgag
gacaagcatgggatgggcagggacaatggctaccagagcttgcacaaagtgctcgagccc
ttcctgcttcgtcgtgtgaaaaaggatgtagagaaatcactgcctgccaaagtggagcag
atcctccgtgtagacatgtcggcacagcaaaaacagtattacaagtggattctgacaagg
aattacaaagccctctccaaaggcaccaggggcagctcatcgggcttcctcaacattgtc
atggaactgaaaaagtgttgcaaccactcattccttatcaaacagtctgaggacgcagag
catgagaattctcaggatcacttgcaggcgttagttcgtggcagtgggaagcttgtgctt
ctgaataaactgctcacaaggctaagggaacgaggcaatcgtgtacttatcttctctcag
atggtccgtatgcttgacattttggctgattacctgaccaagaggcgctacccctttcag
cggttggacggttccattaaaggagaaataagaaaacaagcacttgaccactttaatgct
gagggctctgaggatttctgtttcctcctgtccacccgtgctggaggtctaggcattaac
ttggcctctgcagacaccgtggttatcttcgactctgactggaaccctcaaaacgacctg
caggcccaagctcgagcccacagaataggccagaagaaacaagtcaacatttatcgtcta
gtcacgaaaggtacggtagaggaagacattattgaaagggccaagaagaagatggtgcta
gaccatctagtcattcagagaatggacaccactggacgaacagtattagacaacagctca
ggcaattcaaatacaaacccctttaacaaagaggagttggccgccatattgaagtttggt
gctgaagaactgtttaaagaacctgaaggggaggagttagagccacaggagatggatatc
gaagagatcttacggctggctgaaacaagagaaagcgatcaaggctccagtgccactgat
gagcttctgtcccaatttaaggtggctaacttcaccatggacgagacacccgaactggac
gagaagccagtacgggactggcaagagatcatcccagaggaccagcggcggcaggtagag
gaggaagagaaacagaaggagatggaggacatctacatgctgccaaggagcaggagctcc
aacaaaagggcacaaatgaatgacagcgacagtgatgtcggttccaagctcaaactgaag
ggccattcctctggttcagagagtgagacggatgacagcgatgacgacaagaagcccaag
cgaagaggccggccacgtgcacgcaaaaacaacgtggagggctttactgatgctgagatc
cgcaggttcattaaagcatataagaaatttggagcccctcttgaaaggcttgaggccatt
gcacgcgactctgaactggtggacaaatccatagcagatttgaagagactgggagagctg
ctccacaccacgtgtgtaactgcaatacaggagcatgaagaacaaatgaaggaaaacccc
actgaagctaaagggcctggaaaaaggcgtggagttaacatcaagatttctggcgttcag
gttaatgcgaaatccatcattcagcatgaggaagagtttgagcccctgcataaagctatt
tctgtcaatcctgccgagaggagcaggtttcaactgagctgtcgggtgaaagtgccacat
tttgacgtcgactggactgtccaggatgacgcacagctgctcctgggcatctttgaacat
ggctatggcaactgggaccagatcaaaacagatccagagctaaagcttgcagacaagatc
cttccagacgaacctgacaaaaagccacaggcaaagcagctgcagataagagcagattat
ttactgaagatgctaaagaaggaacaggatactgtcaatacctccaaaacagaagaggtg
accattgtaaagaagagaaaaccacgtgcaaagaaagaaaaaccccagaaagatgaaatc
attaatgaaatctcctctccacgtctgtctgaacacacttcagaggaaggtgaagtaaag
gacgacggagccgagaaatcccccacgaagaaaaagcccaagaagaaggacaacaaagag
aacaaagagaagcagggagctcagaagaaaaacaaggtgggagacaaggacaaaaagcgg
cccaagatcaagaaagaaaaggttaaatcagcagctaaaggcaagaaagctcagggtcct
gtccacattacagcgggcagcgagcctgttcctattggagaggaggatgatgagctggac
caggagacatttagtatttgtaaggagagaatgcggccagtgaagaaggctctgaagcag
ctggataagcctgacgaatgcctgtcagttcaggagcagctgcagcacacacgcacctgc
ctgctgaagattggagatcgtatcacagagtgccttaaatactacagcgacccggaacac
gtcaagacctggcgcagaaatctttggatctttgtgtcaaaattcaccgagtttggagcc
aagaaactgcacaagctgtataaaatggctcagaagaaacgctcccaggaggaagagaag
gagccaaaaaagaaagatgactcagctaagaagaagccgttccgtcctgaaccatctgga
tcaagtcgggactccactggcacacaggcttcaaccaaagctcacctgtcaggaccctcg
tcccactcacaccaccgtgaatcctacaaccagaacaagagacactttccaaacgatgct
cgaggagactggcagcgggaccgtaaatataactacccaggaaacagtaaccagccatgg
caaggtgatcggcatcatccgtatgacagatacaaggatcatcactacggtgatcggcgc
ccacactcagactcataccgaagtgggggaggatttagaaacccgagctcacctcgaaaa
cggccgtatgatcagtacaacaatgaccgagagcaccgtggccatcgtgactattacaac
agacatcctgacccaaagaggcgtcgttcggatgagtatcgctctccaaactaccatcag
ggagcaggtggtggcggaggctacagccaagacttcaggaggatgccggatcaccggggc
aaccagggacccgatcattaccgcccgttccacccggacaaaccccctcctatgctggac
ccgcgttctcctcaggccccattcgagtcggtctcgccgatggaaagaactgctgagccc
aaacccagcccagatgttaactggaacaataggaagacgtga
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integrated database retrieval system
