Trichomycterus rosablanca: 134323831
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Entry
134323831 CDS
T09921
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b
KO
K09364
POU domain transcription factor, class 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134323831 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134323831 (pou2f1b)
03021 Transcription machinery [BR:
trn03021
]
134323831 (pou2f1b)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
134323831 (pou2f1b)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
134323831 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134323831
NCBI-ProteinID:
XP_062861442
LinkDB
All DBs
Position
12:complement(22092640..22249017)
Genome browser
AA seq
694 aa
AA seq
DB search
MADGGAASQDESAAPDSVINNLSETSKCAMENENTNIGAQTKGMDFQRQIVQTSSAISNA
QAQALLQQLTLTPAQQQLLLQQAQAQLLAAAVQQHSASQQNSTTGANISASAATPITQIP
LSQPVQITPDLCQLQQLQSNLSLQQFVLVQPGHSIAAQLQSPQFIISQTPQQSLLQAQNL
LTQLPQSQANLLQTQPSITLATQPEMPTRTIAATPVQTLPHNQTTPKRIDTPSLEEPSDL
EELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL
LEKWLSDAENQTSDQALSIPSSLGSPGLGMEGLNRRRKKRTSIETNIRVALENSFLENQK
PTSEEITLIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGSAISTPIKAIFTSSTPLVPT
TATGLVTSSTSTTLTANHALPLTNTGVSSISLAGTTVGSATTNTASVISTVPSVTAATSS
PSLSLLPSAPQALSAESGLAQEQTGTVTQAPLTLANTLTTGQVMVAAPGLSAALQGAAQL
PTSANIAAMAAAAGLNPSLMTSSQFTPSGALLSLAPSGLGSALSPALMSNSTLATIQALT
SSGTLPITSLDGSGNFLFANVSSGSTPNLVTAPLFLSPQNLSLLTSNPVSLVSAAGAAGA
AAALNLHVTADTQHSSATTAAVAVSTISTASKAQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagtgcagcaccagattctgtaataaat
aatctgtcagaaacaagtaaatgcgcaatggaaaatgagaacacaaacataggtgcccaa
acaaaaggaatggactttcagaggcagatagtgcaaacatcaagtgcaattagcaatgca
caagcacaagccctgctccaacagttgacactaactccagcgcagcagcagttgttgctg
cagcaggctcaggcacagctcctggctgcagctgtgcaacagcactcagccagccagcaa
aacagcaccacaggagcaaacatctctgcctccgctgcaacgccgatcacacagataccc
ctttctcagcctgtccagatcacacctgatttgtgtcagttgcagcagctgcagtcaaat
ctcagccttcagcagtttgtactggtacagcctggccattccattgctgcccagctgcag
tcaccacagttcatcatctcacagacgccacagcaaagtctcttgcaagcccagaatctt
ctaactcaactacctcaaagtcaagccaacctcctgcagactcagccaagtattacttta
gccacacagccggagatgccaactcgcacgatagcagctaccccagttcagaccctgcct
cacaaccagacaacaccaaagcgtattgacacccccagcctggaggagccaagtgaccta
gaggaactagaacagtttgccaagaccttcaaacaaaggagaatcaaactgggcttcact
cagggggatgttggccttgcaatgggaaagctatatggaaatgatttcagccaaaccacc
atctctcgctttgaggctttaaacctaagctttaaaaacatgtgcaagctgaagcctttg
ttggagaagtggctcagtgatgcagagaaccagacttcagaccaagccttgtctatcccc
agctctcttggctcccctgggctgggcatggaaggactaaaccgtcgtcgcaaaaaaaga
accagcattgagaccaacattagagtggccttagaaaatagctttttagagaaccaaaaa
cctacctctgaggaaatcacactgattgctgaccagctgaacatggagaaggaggtgatt
cgcgtgtggttctgcaatcgccggcagaaggagaagaggatcaacccgcccagcagtggc
agtgccatcagcacacccattaaagcaatcttcacctcttccacacccctggtgcctacc
acagccactggtcttgtgaccagtagcacctcaactacactaactgcaaatcatgctttg
cctcttacaaacacaggtgtctccagcattagcctcgctggaaccactgtaggctcagca
accaccaacactgcatctgtaatttctacagtgccctctgtgactgcagcaacatcatca
ccctcgctaagcctcttacccagtgcacctcaggccttgtcggctgagtctggattggct
caggagcagacaggaacagtcacccaggcacccttaacactggctaacacgctaactaca
ggtcaggtgatggtggcagcacctggcctttccgctgcactgcaaggagctgctcagcta
cccaccagtgccaacattgctgccatggcagcagctgcaggccttaacccgagcctcatg
acctcctcacagttcactccaagtggggctttgctgagtctggctcctagtggtcttggc
agtgcattgagcccagcactgatgagcaacagcaccctggccactattcaagctttgacc
tccagtgggactctgcccatcacttctttggatggcagtgggaactttctatttgcaaat
gtcagctctggcagtaccccaaacctggtgacagcaccactcttcctcagccctcagaac
ctgtcactgctcaccagcaatccagtgagcctggtgtcagccgcaggagctgctggtgcc
gctgcggctcttaacctacatgtcactgcagacacacagcacagttctgccactacagca
gctgtggctgtctccaccatcagtaccgcctccaaggcccaatga
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