Trichomycterus rosablanca: 134323833
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Entry
134323833 CDS
T09921
Symbol
stxbp5l
Name
(RefSeq) LOW QUALITY PROTEIN: syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134323833 (stxbp5l)
Membrane trafficking [BR:
trn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134323833 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
134323833 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Lgl_C
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
WD40_WDHD1_1st
Beta-prop_VPS8
Beta-prop_WDR90_POC16_2nd
Synaptobrevin
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
134323833
NCBI-ProteinID:
XP_062861443
LinkDB
All DBs
Position
12:complement(22290269..22598650)
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AA seq
1209 aa
AA seq
DB search
MKKFRKVLDGLTTSSPASSGGSPSCGSASGTPTAGVTLPVLDIQETLMADICKTVRHGFP
YQPTALAFDLVQKILAIGSRSGGVRILGRPGVDCYCQHESGAAVLQLQFLINEGGGYTDY
LWEYRVSQRYFGDGVKYPIITSTRTHPGPVVHLSDSPKDEGKLLIGFETGTIVMWDLRSK
RADFRIYYDEAIHSVSWHHEGRQFICSHSDGSLTIWNLRNTAKPFQVTFPHGKSQRDGRK
ESCKPILKAEYKTCKNSEPFVIFSGGLSYDKGGRRHALTIMHGKTITVLEMDHPIVEFLV
LCETPYLNEVQEPYAVVVLLEKDLIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFADCP
SDIIPVLYSIGAKHRKTGYSNKEWPVSGGTWTLGSQTYPEIIITGHADGSIKFWDATAIT
LQMLYKLKTSKVFKKTKGGELDCSADLVEEDPYAVQMVSWCLQSRILCVVGISAHVILYR
FSKHDANTTITALEVSLPCDLKDMISPSDTENTMGVPYVGAHSPQPPSPQSNTPDSMRDG
KPCLKVKDHVVWIPSGYQAELVVQLLWVDGEPPPQITSLDLNSAYGLLALGNCNGLAVVD
YLQKTVIVCMSTQELYSSVDPFQRLTRSPRRNRQSTSDFCLCNLSNFYSDLKKLILTSHX
TFTELSNNQESLDLERSKSPTSVSYSSSLHNEPRGSPEPMCNLRASHYSPVFYLLDNVKG
PGRKLSLPTDLKSDLDYVNGHCTSPTSQPCVTGRPRGPGGPEGPRLTRRGPGRPPLRKAQ
SAACMEVSLPVSSLTEGFPSKRAMLQQLHGVSMYSHDEHHTTTYSWSERESRENSFSCSR
SSSVSSIDRDTKMAVTTLQFMSYGRKSDAQPTLCLWVGTSLGLVLLVPLLIATDEQDRME
EAVTVTPTNTVIMLKGSIRCFGFLDCTGALIQSPYEVWKDPRDPEDPEQPRRRKLVIFSP
CSSQDASTEGHLAVVCSERQAKVYLMSSHACLYVHNITETSFVLCAEVVAVSNSVCLTCF
CANGHVMILSLPSLRPLLDVHYLPLADMRIARTFCFTNGGQALYLSSPTEIQRITFSQEM
SDHLQEMLGELFTPIATPESQNQGFLKGFFGSNAQPFDREEFFGEAAAGKASQSLAQHIP
GQGSIEGMRAAAGGAVGELARARIALDERGQRLGELEERTALMMASAETFSKHAHELMLK
CKDKKWYQF
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaggaaggtgctggacggactgaccacatcgtctcctgccagttctggt
gggtctccttcatgcggcagtgcttctgggactcccactgcaggagtcactctgccagtg
ctggacatccaggagaccctcatggccgatatttgcaagactgtacgtcatggctttccc
taccaacctacagcactagcatttgaccttgtgcagaagattctggctataggttctcgt
tctggaggagtgcgaattctggggcggccaggagtggactgctactgtcagcatgagagt
ggagcagctgtactgcaactgcaattcctcatcaatgagggaggtggttatacagattat
ctgtgggaatacagggtttcacaaagatattttggggatggggttaaataccccatcata
acatcaaccaggacacacccagggcctgttgtccacctaagtgacagcccgaaagatgaa
gggaagttactgatcggctttgaaactggcactattgtgatgtgggacctccgatcaaaa
agagctgactttagaatttactacgatgaggcaatacattctgtgagttggcatcacgaa
ggtcggcaattcatttgcagccactctgatggaagtcttactatatggaacttaagaaac
acagcaaaaccctttcaagtcacctttcctcatggtaaatctcagagagatggaagaaaa
gaatcatgtaagccaatccttaaggctgaatacaagacttgcaaaaacagtgagcccttc
gtcattttttcgggaggtctatcgtatgataaaggaggcagacgacatgctttgaccatc
atgcatggcaaaaccatcacagtgctagagatggaccatcccatagtggagtttcttgtt
ctttgtgagacaccctacttaaatgaggtgcaggagccatatgcagtggtagtactgttg
gaaaaagatttaattgtggttgatctcacacagagcaattttcccatctttgaaaatccc
taccctatggacattcatgagtctccagtcacatgcacggcttactttgctgactgtcct
tctgacatcattcctgtgctgtactccataggagccaaacacagaaagactggatacagc
aacaaggagtggcctgtgagtggtggcacgtggacgcttggttcccaaacatatccagag
attattatcacagggcatgcagacggatcaatcaagttttgggatgccacagccatcaca
cttcagatgctttacaaactaaagacatcaaaggtgtttaagaagacaaagggtggtgag
ctagactgcagtgctgatttggtggaagaggatccctatgcagtgcagatggtcagctgg
tgcctgcagagccgcattctctgtgtggtgggcattagcgctcatgtaattctataccgc
tttagcaagcacgatgccaacaccacgataacggctttggaggtgagcctgccatgtgat
ctgaaagatatgatctcaccatcagacacggagaacacaatgggtgtaccatatgttggc
gctcactcgccccagcctcctagtccccaaagtaacactccagatagcatgagggacggc
aaaccctgcctcaaggtaaaagaccatgtggtctggattccttctggttaccaagctgag
cttgttgtccagttgctttgggtagatggagagccacctcctcaaatcacaagtctggat
ttaaactcagcctacggcctgttggctctaggtaactgtaatggtttggcagtggtggac
tacttgcagaagactgtgatagtttgcatgagcactcaggaactgtatagttcagttgac
ccatttcagcgtctcacaaggtctccccgcagaaaccgtcagtccacatcagatttttgc
ttgtgtaacctgtctaacttttattcagatttaaagaaactgatccttacctcccactaa
acctttactgagctctcaaataaccaggaatctctggacctggagaggagcaagtcaccc
acctcagtgtcctacagttcctccctacacaatgagcctcggggctcacctgaacccatg
tgtaaccttcgtgccagccattacagtcctgtcttttacctgttggacaatgtaaaggga
ccaggcagaaaattaagtctaccaactgatcttaagagtgatcttgattatgtaaatgga
cattgcactagtccgacttcgcaaccatgtgtgaccgggagacctcgtggtccagggggc
cctgaggggccacgtctcacccgtcgtgggcctggacgaccaccattacgcaaagcccag
tcagccgcatgcatggaagtctctttgcctgtgtcctctctcaccgaaggttttccatca
aaacgggccatgctgcagcagctgcatggtgtcagcatgtactcacatgacgagcaccac
accaccacctactcctggagtgagagagagagtcgggaaaactcattcagctgctcacgg
agttcaagcgtctctagtatagaccgggacaccaaaatggctgttaccacactgcagttt
atgtcctacggccgcaagtcagatgcacagcccacactctgtctgtgggtaggaactagt
ttgggacttgtactgctagtgcccctattgatcgccactgatgagcaggacagaatggag
gaggctgtcaccgtcacacccaccaacacagtcataatgctgaaaggttctatccggtgt
tttggatttttggactgtaccggtgctctaatccagagcccatatgaggtgtggaaggat
ccacgtgatcctgaggaccctgaacagccccgcagaagaaagctggtcatcttctcgcca
tgctcatctcaggatgccagcactgagggccacctagctgttgtgtgctcagagcgccag
gccaaagtttatctcatgtcctcacacgcctgcctttatgttcataacatcactgagaca
tcatttgtgctgtgtgctgaagtagtagctgtttccaacagcgtctgcctgacctgcttc
tgcgccaatggacatgtcatgattctcagcctcccaagtttacggcccctgttggatgtg
cactacctgccgctagcagacatgcgcattgctagaacattctgcttcaccaatggtggt
caggccctttacttgagctctccaaccgaaatacagcgcattactttcagccaggagatg
tctgatcatttgcaggagatgttgggggagcttttcacacccattgcgactccagaatct
cagaaccaaggctttctgaagggtttttttggtagcaatgcacaaccctttgacagagaa
gagttttttggtgaggcagcagcaggaaaggcttcacaaagtctagcccagcacatccca
ggccagggcagcattgagggcatgcgggcagctgctggaggagctgtgggtgaacttgcc
cgagctcgcattgccctggatgagagaggacagagactaggagagctggaagagaggacg
gcacttatgatggccagtgctgaaactttctcgaaacatgcacacgagctgatgctgaaa
tgcaaagacaagaagtggtatcagttttag
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