Trichomycterus rosablanca: 134323847
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Entry
134323847 CDS
T09921
Symbol
gad1a
Name
(RefSeq) glutamate decarboxylase 1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00250
Alanine, aspartate and glutamate metabolism
trn00410
beta-Alanine metabolism
trn00430
Taurine and hypotaurine metabolism
trn00650
Butanoate metabolism
trn01100
Metabolic pathways
Module
trn_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
134323847 (gad1a)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
134323847 (gad1a)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
134323847 (gad1a)
00430 Taurine and hypotaurine metabolism
134323847 (gad1a)
Enzymes [BR:
trn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
134323847 (gad1a)
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
SepSecS
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
134323847
NCBI-ProteinID:
XP_062861464
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All DBs
Position
12:complement(9322022..9335066)
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AA seq
592 aa
AA seq
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MATSAAPSSCGGGGGGGEPSPNMPNLRPPASSYDWSGVAHGCTKKLGMKICGFLQKNNNL
DEKSQIVASLNEQQSPKKLGLQDPRFSRIEADFSNLYARDLLPAKNGEEPTIQFLLEVVE
ILTNYVRKTFDRSTKVLDFHHPHQLLEGIEGFNLDLSDQPESLEQILVDCRDTLKYGVRT
GHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIVGWSNG
EGDGIFSPGGAISNMYSVMVARYKHFPEVKTKGMNAVPRLILFTSECSHYSIKKASAALG
FGTENLILLSTDERGRVIPADLEAKVIDAKRKGYVPLFVNATAGTTVYGAFDPINEIADI
CEKYNMWLHVDGAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVPLQCSAILVREKG
LLQGCNSMSAGYLFQPDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEKHVDR
CLELSEYLYNKIKNREGFEMVFQGQPQHTNVCFWYIPPSLRGMSDGEERRQRLHKVAPKI
KALMMECGSTMVGYQPQGDKVNFFRMVISNSAATKSDIDFLIDEIEKLGQDL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcggcggctccttcctcctgcggcggcggcggcggcggcggcgagcccagc
cctaacatgcctaatttacggccacctgcgtcaagttatgactggagtggagtggcacat
ggatgtacgaagaagctcgggatgaaaatctgtggatttctacagaaaaacaataatctc
gatgagaagagtcagattgtagcttcgctgaatgaacagcagtcaccaaaaaagctcggt
ttacaagatccccgcttcagccgcattgaggccgacttctccaacctgtatgccagagat
ttgctgcctgctaagaatggtgaggagcctacgatccagttcctcttggaggtggtggaa
attctcactaactatgtgcggaagacatttgacagatccaccaaagtgctggactttcat
cacccacaccagctgctagagggcatagagggtttcaacctcgatctctcagaccagcct
gagagtcttgagcagattctagtggactgtagagacaccctcaaatatggtgtcaggaca
ggtcatcccaggttttttaatcagctgtccactgggctggacatcattggcttggctggg
gagtggcttacttcaactgcaaatactaatatgtttacatatgaaattgcaccagtgttt
gtgttaatggaacagctgactctgaagaaaatgagggagattgttggttggtcaaatggt
gaaggagatggaatattctctccaggaggagcaatctccaacatgtacagtgtgatggta
gctcggtataagcatttccctgaggtgaagactaaaggcatgaatgcagtgcccagactc
attctgtttacctctgaatgtagtcactactccataaagaaagccagtgccgctcttggc
tttgggacagagaacctgattctgctgagtacagatgagcgaggtagagtcattcctgct
gatctggaggccaaagtcattgatgccaaacggaagggctacgttcctctttttgtgaat
gccacagctggcactacagtatatggtgcgtttgatcccatcaatgaaattgcagacatc
tgtgagaaatataacatgtggctccatgtggatggtgcatggggaggtggactactgatg
tccagaaagcacagacacaagctcaacggcattgagagggcaaattctgtaacatggaat
ccacacaagatgatgggtgttccgctgcagtgctctgccattctggtcagagagaaggga
cttttgcagggctgcaattcaatgtctgctggctacctttttcagcctgataaacagtac
gatgtcacctatgatactggagacaaggctattcagtgtggacgacatgtggacatcttt
aaattttggctcatgtggaaagcaaagggtaccattgggtttgagaagcatgtagaccga
tgtctggagctctcagaatatctctataataagatcaaaaacagagagggctttgaaatg
gtttttcaaggacagccacaacacactaatgtgtgcttctggtacattccaccaagtctg
cgtggtatgtcagatggggaggagaggaggcaaagactccataaggtggcacccaaaatc
aaggccttgatgatggagtgtggctccacaatggtgggctaccagcctcaaggagacaaa
gtcaacttcttcaggatggttatttccaactccgctgccaccaagtcagatattgacttt
ctgattgatgagattgaaaaactgggtcaggatttataa
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