Trichomycterus rosablanca: 134323865
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Entry
134323865 CDS
T09921
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134323865 (tbc1d4)
Membrane trafficking [BR:
trn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134323865 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134323865 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
134323865 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
PTB
DUF4249
Motif
Other DBs
NCBI-GeneID:
134323865
NCBI-ProteinID:
XP_062861486
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All DBs
Position
12:30703985..30741835
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AA seq
1208 aa
AA seq
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MEGSEDKGKVKEKSFSLCYVGYSGLDRRTTLPMLPWLVAEIRRKSESGPVSARQVQLSLT
PPIIRCVPANSSSSSVFIFEHKAQCISRFIHNSHDLAYFAYLIRSQPDDPECEMACHVFK
ACDPDQVAEVISSIRQASKVALKEDSKPKQEAEESFYNSQKFEVLYCGKVMMNNKKAPST
LIDDCIELFREHETERRRLRLLNGQRVSTETPVVFSVGDDPLSAPLSETAEVESNGKVGS
QRSAFPECIQEDSGFEQQEFRTRCNSLAQNKPKDIGAKGPTRRRHASAPNNVQPSDADKN
RTMLFQVGRFEVNLISPDSKTVVLEKNFKDISFCSQGVKQTDHFGFICRDVVESGPSQYM
CYVFQCANESLVDEVMLTLKQAFSTAAAMQSSKTQIKLCEACPMHHLHKLCERIEGLYPP
RAKLAIQKYLSLLTDNEQVEIFERVQRMKPSSDQEENELVILHLRQLCETKQKTHVHIGE
APQNSANITSGSENSNAAGRNKLDVLKNKARSSLTSSLENIFSRGASRMRMRLGSMGSFD
RVSDESPGDSPPGTPPGFVEEDPDAPQFRRRAHTFSHPPIKKRISFTELPTQSRIPVHRQ
QSLAPELLQSSQVRVPRKRSVSEGESSFSLPSSFSAPTFLKSFNLGSFSSLASLPDSASL
KSNGEDRKRSLSGCSTDLVTPVTLRRVSWRQKIFLRVASPMNKTSASMHKADIDGSELLP
LSPRAFALSSLLPSVQGQRGETGRRTAADYRALWKKAIHQQILLIRMEKENQRLEASRDE
LHIRKMKLDYQEVGECPEEVLALWEMKLNVPCRTKVQWNKDEIHTAICQGVPKSRRGEVW
LLLSQQYRLRHRLPQRQQPPDTLYQDLLKQLTTQQHAILVDLGRTFPTHQYFSTQLGAGQ
LCLYNLLKAYSLLDTEVGYCQGISFVAGVLLLHMSEEQAFDTLKFLMYDLGLRRQYRPDM
ISLQIQMYQLSRLLHDYHRGLYSHLEEHEISPSLYAAPWLLTLFASQFPLGFVSRIFDLL
FVQGTEVIFKVALCLLSSHEGEILECDSFESIVNYLKTTIPTLTHSQMEETITKALEMDI
SKQLHAYEVEYHVLQDEMVDAPPLSDDSDRLEKLEKTNAQLKKQNMDLLEKLQAARVKIQ
SLESSMESFLANESQMKHMIRSLEQEKANYQKTIERMRNCLPADAADMEMTQLKMNSNGK
TKAANKKP
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggagggatcggaggacaaaggaaaagtgaaggagaaaagcttctcgctatgttacgtg
ggatactcggggctggataggcgcaccacgttgcccatgcttccgtggctcgtagcagag
atcagacgcaaaagtgagtccggtccggtttctgcaaggcaggtccagctgtccctcacc
cctccgatcatccgatgtgtacctgccaacagcagcagctcgtccgtgtttatctttgag
cacaaagcgcaatgcatctcacggttcatccacaacagccacgatctggcttactttgcc
tatttgatccgcagccagcccgatgatccggagtgtgaaatggcctgccatgtgtttaaa
gcgtgcgatccagaccaggtggccgaggtgattagcagcattcgccaggcctctaaagtt
gctctaaaggaggacagtaaacccaagcaggaggccgaggagtccttttacaactcgcag
aaatttgaggtgctttactgtggcaaggtaatgatgaacaacaagaaagcaccctccacg
ctgatcgacgactgcatcgaacttttccgggagcacgagactgagcgcaggcgtcttcgc
cttctgaacggccaacgtgtctccaccgagacccctgtggtgttcagcgtgggagatgac
cccctcagtgctccgctctcagagactgcagaggtcgagtcaaacgggaaagtaggcagc
cagcgtagtgcctttcctgagtgtattcaggaggactcgggcttcgagcagcaggagttt
cgtacacgctgcaacagcctggctcaaaataaacctaaagatataggagccaaagggcca
acgcgcaggaggcatgccagcgctcctaacaatgttcagccttcagatgcagacaagaac
cgcactatgttgtttcaggttggacgctttgaggtgaaccttatcagccctgacagcaag
accgttgtgctggagaagaatttcaaagacatttccttttgctctcagggagtgaagcag
acggaccactttggctttatttgtcgagatgtggtggagtctgggcccagccagtacatg
tgttatgtgttccagtgtgccaatgaatctctggtggatgaggtgatgttaactctgaag
caggccttcagcacagcagcagcaatgcagagctccaaaacccaaattaaactgtgcgag
gcttgtcctatgcaccacctgcacaagctctgtgagcggattgaaggtttatacccaccc
agagcaaagctggccattcagaaatacctctcactgctgactgataatgagcaggtcgag
atttttgaacgtgtgcagaggatgaagccaagttctgatcaggaggagaatgagcttgtt
attcttcacctcaggcagctgtgtgagaccaagcaaaagacccacgtacatattggagaa
gctcctcagaattcggctaacattacatcaggctccgagaactcgaacgcagctggacgc
aacaagctggatgtgctaaagaataaagctcgcagttctctcaccagctccctggagaac
atcttttcacggggtgctagccggatgcgtatgagacttggaagcatgggaagctttgac
cgtgtaagtgacgagtctcctggtgactctcctccagggactccacctggttttgtggaa
gaggaccccgatgccccccagtttcgccgccgggcgcacaccttcagtcatccaccaatc
aaaaagaggatctcttttacagagttgccaactcaaagcaggattcctgttcataggcaa
cagtccctggctccagaattgctgcagagcagccaagtgcgtgtgccaagaaagcgcagc
gtctctgagggcgagtcctccttcagcctcccctcatccttctcagctcccactttcctg
aaaagttttaatctaggctccttcagctcactggcctccctgccggacagcgccagcctc
aagagtaatggagaggatagaaagagaagcctttcaggctgcagcactgacttggtgaca
cccgtgacactgcgcagggtgtcttggcgtcagaagattttccttcgagtggcctcgccc
atgaacaagacctctgcctctatgcacaaggccgatatagatggcagtgagctgctgccc
ctctctcctcgtgcatttgcactgtccagtctgctgccctctgttcagggccaaagagga
gagaccggccgccgcaccgcagctgattatagagccctgtggaaaaaagccatccatcag
cagatccttctcatacgcatggagaaagagaaccagcggttagaagccagccgagatgag
ctgcacatccgaaaaatgaagctggactaccaggaagtgggcgaatgtcctgaagaggtg
ctggctctgtgggagatgaagctgaatgtgccctgcaggaccaaagttcagtggaataag
gatgagatccacacagcaatctgccagggtgttccaaaaagtaggcggggtgaagtgtgg
ctgcttctctctcagcagtatcgcctgcgtcatcgtctaccccagcggcagcagccacca
gatacactctaccaggatctgcttaaacaactcaccacgcaacagcatgccatcctggtg
gatctaggtcgcacgtttcccacacaccagtacttcagcactcagttgggtgcaggacag
ctgtgcctctataatctgttgaaggcctactctctgctggatacagaggtgggatactgc
cagggtatcagctttgtggctggagtgctgctgctgcacatgagtgaggagcaggccttt
gacactctcaagttccttatgtacgatctgggtctcaggcgccagtaccggcctgacatg
atctccttacagattcagatgtatcagttgtctcggctgctgcacgactaccatcggggc
ctttattcacacctggaggagcacgagatcagcccaagtctgtatgctgcaccctggttg
ctcacgctgtttgcctctcagttccccctcggctttgtctcccgcatctttgacctcctg
tttgtccagggcactgaggtgatttttaaggtggccctatgtcttctgagcagccacgag
ggggagatactggagtgcgacagctttgagagcatcgtaaattaccttaagaccaccatt
cctacccttacacacagtcagatggaagagacaatcaccaaggctttagaaatggacatc
tccaagcagctgcacgcctatgaggtggagtaccacgtcctacaggatgaaatggtggac
gctcctccactgtcggacgactcagataggctggaaaaactagagaagaccaatgctcaa
ctgaaaaagcaaaacatggacttgctagagaaactgcaggcagcacgggtgaagatccag
agtcttgagagcagtatggagagcttcttggcaaacgagagccagatgaagcacatgatc
cggtctctggagcaggagaaagccaactatcagaagactattgagcgcatgcgcaactgc
cttcctgcagatgctgctgatatggagatgacccagctgaagatgaacagcaacggcaaa
accaaagcagctaacaaaaagccttga
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