Trichomycterus rosablanca: 134323896
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Entry
134323896 CDS
T09921
Symbol
smo
Name
(RefSeq) protein smoothened
KO
K06226
smoothened
Organism
trn
Trichomycterus rosablanca
Pathway
trn04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134323896 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
trn04030
]
134323896 (smo)
G protein-coupled receptors [BR:
trn04030
]
Frizzled / Smoothened family
134323896 (smo)
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GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
134323896
NCBI-ProteinID:
XP_062861538
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Position
1:66310159..66324572
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AA seq
827 aa
AA seq
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MSSRLLGSIVGRFGMLCIWAGILKISQAVMLHKNESAFNDFCKKTTTCEVLKYNTCLGSP
LPYTHTSLILAEDSDTQEEALEKLAMWSGLRNAPRCWAVIQPLLCAVYMPKCENGKVELP
SQLLCQATRRPCSIVEQERGWPNFLKCENKDQFPMGCQNEVQNLKFNTSGQCEAPLVKTD
VQASWYKDVEGCGIQCDNPLFTEEEHSDMHGYIAIFGSITLLCTFFTLATFLADWKNSNR
YPAVILFYVNACFFIGSIGWLAQFMDGARKEIVCKSDNTMRLGEPSSTETLSCVIIFIIV
YYSLMSGVIWFVILTYAWHTSFKALGTTQQPLSGKTSYFHLVTWSIPFILTVAILAIAEV
DGDSVSGICFVGYKNYRYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKA
ASKINETMLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREYVLCEANVTIAHQTN
KPIPECTIKNRPSLMVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWFKIIGRSDDEPK
RIKKSKMIAKAFSKRKELQKDPEKELSFSMHTVSHEGPVAGINFELNEPSIEMSSAWAQH
VTKMVARRGAILPQDISVTPTGTPVPPPEERNRLWMVEAEISPEMMKRKRKKKKRKKDLR
PVAPAEEQVNPVARHREFGPSAVPRLPKLPAHNSLVANLWERQCQQEENVLPGSFPEFRP
SYPISHQERYVKPGYVLSSQRSRDPGLNLANTLTVRDSQYEGGGQYKQPAWQSNGGFHYL
GQDMPVPLGGGRTEVAPRSEARRQVAAPIHSRTNLMDTELMDAYSDF
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaggctcctcggctccattgttggcagatttgggatgctttgcatttgggct
ggcatcctgaaaataagccaggccgttatgttgcacaagaatgaaagcgcttttaacgat
ttttgtaagaaaacgactacttgtgaggttttgaagtacaatacatgccttggatctcct
ttaccttacacacatacttctctgatcctggctgaggactccgacacgcaagaagaagct
ctagagaagttggccatgtggtccggtttaagaaatgctcctcgctgctgggcagtcatt
cagcctttgctgtgtgctgtttacatgcctaagtgtgagaatggcaaagttgagctgccc
agccagctcttgtgccaggctacccgtcgaccctgcagcattgtggaacaggagcgagga
tggccgaactttctcaagtgtgagaacaaggaccagttccctatgggttgccagaatgag
gtacagaatcttaagttcaacacatcaggacagtgtgaggctccactggttaaaactgac
gtacaagccagctggtacaaagatgtggagggatgtggcatccagtgtgacaatcccttg
tttacggaggaggaacactctgacatgcacggctacattgccatctttggatccatcacc
ctgctttgcactttctttacattggcaacgtttcttgctgactggaaaaattccaaccgc
taccctgctgtcatcctcttttatgtcaatgcctgctttttcattggcagcattgggtgg
ctcgctcagttcatggatggcgcccgcaaagagattgtgtgcaaaagtgataacacaatg
cgacttggagagccctcatcgacagaaacactttcatgtgttatcatctttatcattgtg
tactattccctaatgtcgggggtcatctggttcgttatccttacttatgcctggcacaca
tcttttaaagctcttggcactacccaacaacctctgtctggaaagacatcatacttccac
ctggtcacatggtcaattccattcattctcacagtggctatattggccatagcagaggtt
gatggagactctgtaagtggaatctgctttgttgggtacaagaactacagatatcgagcc
gggtttgttttagctcctattggtgtagtacttgtggttggtggttatttcctcataaga
ggagtcatgacattattctctatcaaaagtaaccatcccggactgctgagtgaaaaagct
gcaagcaagattaatgaaaccatgctgagacttggtatatttggcttcctggcttttggt
tttgttttcatcacttttggatgtcatttctatgacttttttaaccaggctgagtgggaa
agaagctttcgggaatatgtgctgtgtgaagccaatgtgactatagctcatcagaccaac
aaaccaattccggagtgtaccatcaagaacaggcccagtctaatggtggagaagattaat
cttttctccatgtttggtactggcattgccatgagcacctgggtgtggaccaaagccacc
attcttatctggaaacgcacttggtttaaaatcattggacgaagtgatgatgaaccaaag
cgtatcaaaaagagcaagatgatagccaaggcattctcaaagaggaaagaactccagaag
gatccagaaaaagagttgtccttcagcatgcacacggtctcacacgaaggacctgtggcg
ggtattaactttgagctgaatgagccatccatagagatgtcctctgcatgggcccagcat
gtgactaagatggtggcgagacgtggtgctattttaccccaggacatctcagtcaccccc
actggaactccagtgccaccaccagaggagagaaacagattatggatggttgaagctgaa
atctcccctgagatgatgaaacgcaaaagaaaaaagaagaaaaggaaaaaggatttgcgc
ccagttgcacctgctgaagagcaagtgaatcctgttgcccgtcacagagagtttggcccc
agtgctgtccctcgccttcccaaactcccagcacataacagcctcgtggctaacctgtgg
gaacgtcagtgtcagcaagaggagaacgtcctgccaggctccttccctgaattccgacct
tcctatcccatttcacaccaggagagatacgtcaagcctggatatgttttatccagccag
cgcagcagggatcctggcttaaaccttgcaaataccctgacagtaagagatagccagtac
gagggaggaggccagtacaaacaaccggcctggcaatcgaatggtggattccactattta
gggcaggacatgcctgtgccattgggtggagggaggacagaagttgcacctcgatcagag
gccagaaggcaggtggctgccccaattcattccagaaccaatcttatggacacagagctg
atggatgcttactctgatttttga
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