Trichomycterus rosablanca: 134323907
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Entry
134323907 CDS
T09921
Symbol
als2a
Name
(RefSeq) alsin isoform X1
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134323907 (als2a)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
134323907 (als2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
VPS9
MORN
Motif
Other DBs
NCBI-GeneID:
134323907
NCBI-ProteinID:
XP_062861555
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All DBs
Position
12:complement(4838075..4874152)
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AA seq
1682 aa
AA seq
DB search
METQKNSEEKECSRVRGVTHRWQGYSSSVEPVPLLLSQPVRQAALGTSHGVLLTEGGLVY
CFGELPWRRDLTSQAVEPILESTLTDLSVVRVSAGSFHCGAITDNGVVYMWGENSHGQCG
ITGLNLVPDPFPVNIVDDDTVPSEVVKIQDLACGAQHTLALSTKHEVWAWGSGCQLGLVT
TVFPVWKAQKVEHLTGKYVVQIACGEFHSLALVHTLPPSGSSQQSFNKCNHCKQSLYTMI
DKDDHVIISNNHYCPLGVELTDAKHDQGSRQESPALTPKEIPKPDLQNSTGLSDACLSQE
AVDGSYSNDTETPAMNEPAPDSSSPPLRHLTNTKSSLYPDEQAVKDYLKRISDQSILEQF
ETPSRKGSQPPSRQTSLKEQSSKTVLSSLATVNMSNGIESKLLDSAPVDLQECNATSLFL
NSHTGLCTLPVRDSVSDEDSEDSGINRVSPCDFLASNSFEVSDESVVTVGNDQCSDKFLE
DKRSASLSNILIEEMEESNRRRSLPNLLSSDKFNWTKVGGTSMTNSSVIEKEKENLLPSL
YTEVWSWGRGEEGQLGHGDTLPRLQPFCIKSLSNKEIVKIATGSLHSLALTAQCEAYSWG
CNTFGQLGHVSSTTVPQLVQMSDGIRVWDVAGGMTHTVLLADGDCLQPILYYTGEQVQED
SPTGTCTQTPSLLPFFMNLGFVRSVLARGLSCLALADQNVMGFIATLHELASAERKFYCT
LSKVKNQVLQPLLARDNVSAYLGKTSTLLFQSMVGHYSRLCHLSGQHATSLTNFLQNSRD
VKSLSMLKNAALFIDTYKDYSSPVGNFLVMGGFQALVKSSQGCLGKKLELVKKLLQLKEK
NIAPNDLLLNLFYMPLQHVQDYSRLLLKLTTCFDVSSVEYHMIQVGCVQFEGLAQLLSKQ
RKDAETTYTFWKNFSGKGQECLRKPSRRLVCDSGSKGLTLQNSGRFSVNRFILFNDALVH
AQGNISSKKFFSSYYIYPLATLWVEPFSDENLGLLGLKLTTPEENFTLLASTPLEKGKWL
KVIHQAVDEVLGVGVDAHGFNGGQRTEPPVSRTATYTFSKEGRLKNAAYGGRWLLGKPYG
IGDLKWPDGRVYYGNFKNGLEDGFGDYMMPNMALKTFDRYKGHWKEGKMHGFGTYRYATG
EVYEGSFQDNLRHGHGMLSSGRQASSSTSSVFVGHWVNDKKTGYGIFDDITKGEKYMGMW
QDDQRQGTGVVVTQFGLYFEGQFNNNKMTGTGLLFSDDDTAFEGEFSDDWTLDGRGVLSM
PHGDSFEGIFVGEWGSELKVSGTFSKLCPYDTEEKKMKTFKIGRHVVPAEEKWGAVFKEC
WSRLGCETPGLGENERAWDNIAVILTTSRRERMHRYTHTVTSEALSRSQCKMLESLEVIP
QHNGLCTAESYENIRRYLVKAFDTPLHPLGWLLETLVTVYRMTYVGVGSNRRLLEQAVKE
IQSYLKHIFQLVRFLFPGLPEEGGFIPDTSERRLSGTLNSSTCSNIGQQGLFVSSSGLLL
PVLLPRLYPLLFALYALEKEREEEVYTESLFYLNRQPDLSLLTFLGVPKKFWPVSISVLG
EKKEVLPSTMDVCFATAVETLQQIGSFTFTPADKLRVIQMTFEELTQEVQGMLGQDFMWG
MDDLFPVFLYVVLRARIRNLGSEVSLIEDFMDPALQHGELGLMFTTLKACYYQIQNEKSR
VM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggagacccaaaagaactctgaagagaaggaatgctcccgagtgaggggtgtaacccac
aggtggcaaggctactcatcttctgttgaaccagtgccgctgctcctgagtcagcctgtg
cgtcaggctgcactagggaccagccatggagttctgctcacagaaggtggcctcgtctac
tgctttggagagcttccatggagacgagacctaacttcccaggcagtggaacccatcctt
gagagcactttaactgacctgtctgtggttcgtgtttctgcaggcagctttcactgtggg
gccataacagacaatggagtggtgtacatgtggggggagaactcccatggtcagtgtggt
atcactggtttaaatctggttcctgatccatttcctgttaacattgtggatgatgacact
gtaccttcagaagtggtcaagatccaggatctggcctgtggtgctcagcatacattagcc
ctttcaacgaagcatgaggtttgggcctggggaagtggctgccagttgggccttgtgacc
actgtgtttccagtgtggaaagcacagaaggtggagcacttaacggggaaatatgtggtg
cagattgcctgtggcgagttccacagtttggctttggttcacacactacccccttcaggg
tccagtcaacagtccttcaataaatgtaaccactgcaaacagtcactttacactatgatt
gacaaagatgatcatgtgatcatttctaacaaccattactgtccactaggggtggaacta
actgatgcaaagcatgatcaaggatcaaggcaggaatctccagccttgacaccaaaggag
atcccaaaacctgatctccagaactccactgggttgtctgatgcttgcctctctcaggaa
gctgtagatggatcatacagtaatgacactgaaacaccagcaatgaacgaaccagctcca
gacagttccagccctccacttcgacaccttaccaataccaaaagctctctttacccagat
gaacaagctgtgaaagactacctcaaaaggatctctgaccagtccatcttagagcagttt
gagactccttccaggaaaggctcgcaaccacctagccgtcagacatctctcaaggagcaa
agtagcaaaaccgtattatcatcactagcaaccgttaacatgagcaatggtattgaatcc
aagcttttagattctgcaccagttgatttacaagaatgcaatgctacaagcttattttta
aatagccacactggtctgtgtaccttaccagtgcgagattctgttagtgatgaagactct
gaagactccggtataaatagggtcagtccttgtgactttttagccagtaatagttttgag
gtctctgatgaaagtgtagtgactgttggtaacgatcagtgttcagacaagttcctagaa
gacaagaggagtgccagcctgtctaacatcctgattgaggaaatggaggaatctaatcgc
agaagatcattacccaacttgctctcatcagataagtttaactggacaaaagtgggagga
actagtatgacaaactcaagtgttatagagaaggagaaggagaatctcctcccgtctctt
tacacagaagtgtggagttggggtaggggtgaggagggtcagctgggtcatggagacact
ttacccaggctgcagccgttttgcatcaagagcttaagcaacaaggaaatcgtgaagatt
gctactggatcacttcattccctggctctgactgctcagtgtgaggcttattcctggggt
tgcaatacatttggtcagttgggtcacgtgagctctaccactgtgccacagcttgtgcag
atgtctgatggtatccgtgtgtgggatgtagcgggaggaatgacccacactgtcttgcta
gccgatggagactgcttacagcccattctgtactacactggtgagcaggtgcaggaggat
tctcctaccgggacatgcacccaaacgccttctcttttgcccttcttcatgaaccttggc
tttgtgagaagtgttttagcaagaggactaagctgtttggcactggctgatcagaatgtg
atgggtttcattgccactctacatgagctggcatcagcagagcggaagttctactgcaca
ctgagcaaagtgaagaaccaagtacttcaacccttactggctcgggacaacgttagtgca
tatttgggcaagacttccacattgctgttccagtccatggtaggacattatagtcgcctg
tgtcacctatcggggcagcatgccacttctctcaccaacttcctacagaacagcagggat
gtcaagtctttgtccatgttgaaaaatgctgccctttttatagacacctataaagattac
agcagtcctgtagggaactttcttgtgatgggaggattccaagctcttgtgaagtcctca
caaggatgtttgggaaagaagcttgaactggtaaagaagcttttgcagctcaaggagaaa
aacattgcaccgaatgatctgctgctgaacctgttctacatgccactgcagcatgtgcag
gactatagtcgtcttcttctaaagctgactacctgttttgatgtgagctctgttgagtat
cacatgattcaggttggctgtgtacagtttgaaggattggcccaactcctcagcaaacag
aggaaagatgctgagactacctacaccttctggaagaacttctcgggaaagggccaagag
tgcttacggaagccgtcccggaggctggtgtgcgacagtggaagtaaaggtttgaccctg
cagaactctggaagattctcggtcaacaggttcattctcttcaatgatgcacttgttcat
gcacagggtaacatttcatctaagaagtttttctcctcttactacatctatccactggcc
acgctttgggtggaacctttctcggatgaaaaccttggcttgctgggactaaagctgacc
acccctgaagaaaatttcaccttgttggcatctacacctctggagaaggggaagtggctg
aaagttattcatcaggctgtggatgaggtgctgggggtgggtgtagatgcacatgggttc
aatggcggtcagaggacagagccccctgtttctcgcactgccacatatacgttctctaag
gagggccggctcaaaaatgccgcgtacggtggtcgctggcttttaggcaaaccttatggc
ataggtgacttgaagtggcctgatggtagagtttactatggtaatttcaagaatggcctg
gaggacggatttggagactatatgatgcccaacatggccttaaagacatttgatcgttat
aagggtcactggaaggagggcaaaatgcacggctttggaacctaccggtatgctacaggt
gaggtgtacgagggctcatttcaggacaacctgcgtcatggtcatggcatgctgagcagt
ggccgacaggcttcctcttccaccagcagtgtgtttgtcggtcattgggtcaacgacaag
aaaactggttacggcatctttgacgacatcaccaaaggtgaaaagtacatggggatgtgg
caggatgaccagcggcagggcactggtgttgtggtcacccagtttggcctgtattttgag
ggacaatttaataataacaagatgacgggcactgggcttttgttcagcgatgatgacact
gcctttgaaggagagttttcagatgactggacattagatggaaggggggttttgtcaatg
cctcatggagactcttttgagggcatctttgtgggtgagtggggatctgaactgaaggta
tcaggaaccttttcgaagctgtgcccttatgacactgaggaaaaaaagatgaagacgttc
aagatcggccgtcacgtagtgcctgccgaagagaaatggggggctgtgtttaaagaatgc
tggagtcgtctgggctgtgaaactccaggactgggagagaacgagcgagcttgggacaac
atcgcggtgatactgacgaccagccgcagggagcggatgcacaggtacacacacactgtt
acttctgaagctctgagtcgctcgcagtgtaagatgctggagagtttggaagtaattcct
cagcacaatggactttgtaccgccgaatcctatgagaacattcgccgctacctcgtcaag
gcgtttgatactccactgcatcctttgggctggctgctggagacgctggtcactgtgtat
aggatgacctacgtgggtgtgggatccaatagacggctcttagagcaggctgtgaaagag
atccagtcctacttgaaacacatattccagcttgtcaggtttttgtttcccggtctgcct
gaagagggggggtttattcctgacacctcagagagaagattaagtggcacactaaacagc
agcacttgttcaaacattggtcagcagggcttgtttgtgagtagctccggcctgctgctc
ccggttctgttacctcgtctctatcctcttctctttgctctgtacgctctggagaaggag
cgtgaggaggaggtgtacacagagagtttgttctacctcaacaggcagcctgacctgtct
ttgcttacctttttgggagtgcctaaaaaattctggccagtatcgatctctgttttagga
gagaaaaaggaggtgctgccgagcactatggacgtttgctttgcgactgctgtggagacc
ctgcagcagatcggcagctttactttcactcctgcagataagctccgtgtgattcagatg
acctttgaggaactcacgcaggaagttcaaggcatgctcggccaggacttcatgtggggc
atggatgacctctttccagtcttcctctatgtagttcttcgtgcacgaatcagaaacctt
ggatctgaggtgagcctgatcgaggactttatggatcctgctctacagcacggtgaactc
ggactcatgttcaccactctgaaagcttgctactaccagattcagaatgagaaaagcagg
gtcatgtag
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integrated database retrieval system