Trichomycterus rosablanca: 134323931
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Entry
134323931 CDS
T09921
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
134323931 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134323931 (xrcc5)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
134323931 (xrcc5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
134323931
NCBI-ProteinID:
XP_062861613
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Position
12:complement(847547..862006)
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AA seq
736 aa
AA seq
DB search
MLYDSVLRFAPLYIFLQSALVLCVDVGFSMSNSALGEESPFDQAKKVVQKFIQRQVFAET
KDELGLVLFGTDDTKNPLAQDDQYQNIFIRRHLMMPDFELLEEIEHQLKPGGQHADWLDA
LVVCMDLLQKETMGKKYDRLSIVLLTDLNTPACADQLDVIVGNLKRAGIILQFFLPFPVD
ADKEGSGGEDGAGPRRPPQRGKGLSGEQKKGLEMVRQVMTSMDEEDGLDEVHTFSDALEK
LSMFKRIEKRPMAWPCQLTIGSSLSIRVVGYKAVCEEKIKKIWSVVDAESHRKDDVKRET
VYCLNDDNETEVQKEDVIQGFRYGSDIVPFSKVDQDQMKYKSDGKSFAVLGFAKQDLIPR
HRFMGNQVIKVFAPRDDEHAAVALSALIRALDSLKMVAIIRYAYDRRSNPQVGAAFPCVK
QKYECLQYVQLPYMEDLRQFTFPSLENNKKFTPSESQLSAVDDLISSMMLMEEDEDGETF
DIFKVNKIANPQYQRLFQCLHHRGVHPNTPLPPVEPWLKRQLELPQAVAARCQAPLQEVK
KLFPLKEALQKKGQKTSADVFGGSEEPDAKKFRPDDGERFNLAETSEGNVTSVGSVNPAE
NFCTLVQKKIIPFEQACEQLTHRMEQLLGNRSTEYYMKTIRCIQVFRERSVKEANAELFN
TYIHSLKRSVPDRNLQEFWDLLVADALTLISKDEVESSTVSKQEAKEFLMCEEKEEETEA
PSHEDAGDVDDLLDMM
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgctttatgacagtgtactaagatttgcacccttatatatatttttgcagtcagctctg
gtgctttgtgtggacgtgggtttctccatgagcaactcggcccttggtgaggaatccccc
ttcgaccaggccaagaaggtcgtccagaagttcatccagcggcaggtcttcgctgaaacc
aaagatgagttgggtctggttctgttcggtacggatgacaccaagaacccgctggctcag
gatgatcagtaccagaacatcttcatacgccggcatttgatgatgcctgacttcgagctg
ctggaggagatcgaacatcagctgaagccgggcggtcagcatgccgactggctggacgcg
ctggtcgtgtgcatggatcttctgcagaaggaaaccatggggaagaagtacgacagactg
agtatcgttctcctcaccgacctcaacacgcccgcctgcgcagatcagctagacgtcatt
gtcgggaacttgaagagagccggaatcatcctgcagttctttcttccgtttcctgtggac
gctgataaagaaggtagcggaggagaagatggagcaggtccgaggcgtcccccacagaga
gggaaaggtctgagtggagagcagaagaaggggctggagatggtgcggcaggtcatgacg
tcgatggatgaggaagatggtctggacgaggttcacaccttcagcgacgctttagagaag
ctttccatgttcaagcggatcgagaagcgacccatggcgtggccctgtcagctgaccatc
ggcagctctctgtccatccgcgtcgtcggatacaaagccgtgtgtgaggagaagattaag
aagatctggtccgtggtggacgccgagagtcaccggaaggacgacgtgaagcgagagacg
gtgtactgcctcaacgacgataacgagaccgaggtgcagaaagaggacgtcattcagggt
ttccgttacggcagtgacatcgtcccgttctccaaggtggaccaagaccaaatgaagtac
aagtctgatggaaaaagcttcgcagtgctgggatttgccaagcaggacctgattcctcgc
catcgatttatgggcaaccaggtcattaaggtttttgctcccagagatgatgagcatgca
gccgtcgctctctctgctctgatccgagccctggacagtctgaagatggtggccatcatc
cgttacgcctacgaccggcgcagcaaccctcaagtaggagcagcgtttccctgcgtcaaa
cagaaatatgagtgtttacagtacgtccagttaccgtacatggaggacctgcgccagttc
actttcccctcactggagaacaacaaaaagtttactccctcagagtctcagctgtcggcg
gtggacgatctgatcagctctatgatgctgatggaggaggatgaagatggagagacgttc
gacatatttaaagtgaataaaatcgccaacccacagtatcagaggctcttccagtgcctc
caccatcgcggcgtgcacccgaacactcccctcccacccgtggaaccgtggctgaagaga
cagctggagctcccacaggccgtcgccgcccgctgccaggctcccctgcaggaggtgaag
aaactgttccccctgaaggaggcgctgcagaagaagggtcagaagacgagcgctgacgtg
ttcggagggagtgaggagccggatgctaagaagttcagacctgacgatggtgagaggttt
aatctggccgagacgtcggagggtaacgttacctcggttggcagtgtgaatcctgcagaa
aacttctgcaccttggttcagaagaagatcattccatttgaacaggcgtgcgagcagctc
acccacaggatggagcagttgctgggcaacaggagcacggagtactacatgaagaccatc
aggtgcatccaggtctttcgggagcggtccgtcaaggaagcgaacgctgaactttttaac
acctacattcactccctgaagaggagcgttcccgaccgaaatctgcaggaattttgggat
ctgctggtcgcagatgctctgacgttaatcagtaaggatgaagtggagagcagcacggtg
tctaaacaagaggccaaagagtttttgatgtgtgaggagaaggaggaggaaacggaggct
ccgtcccatgaggacgcaggagatgtggatgatttgctggatatgatgtga
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