KEGG   Trichomycterus rosablanca: 134323958
Entry
134323958         CDS       T09921                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
trn  Trichomycterus rosablanca
Pathway
trn03410  Base excision repair
trn04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    134323958 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    134323958 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:trn03400]
    134323958 (parp4)
DNA repair and recombination proteins [BR:trn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     134323958 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 VWA BRCT_2 WGR-like_PARP4 BRCT VWA_2 VWA_CoxE
Other DBs
NCBI-GeneID: 134323958
NCBI-ProteinID: XP_062861653
LinkDB
Position
12:12603309..12632986
AA seq 1750 aa
MAIFDDCSVVLDLKNVSYKEKKKLMSAILDNGGNIAYVVNQKCSFVVVTSLENLSCSKQR
TVLKHQTPVVSPQYVWSCLEKQTLLPVEKHILKPQGSEPTPEQLSQAGLKVSFQLSKGLM
SKAHQQEQSEVQAHDGTYLIEPRFWKENNPNVSEFPSHFQVAKYSIFSKLNKWSVLELQS
AKGQAGQEYRVVKSVVHEDEKTVMIDKEMRSSSSEDALDMYLIMNKELQDQGFTQTQTLP
SWAEKLASNGLQQLLLEEKLNCGTVSQEVGVFLELIWKEALGSLNNILNVPVTSISLNDV
SRVEGLLLQAQKNQNEDVVAALLDEVNTLLPLNIPEPDSKNKLVSQKLDLCQLIRDILNM
TELTLGNPDPSSLGKYRALRCSVEQMAPESPEFRSVSQLLQDRPAQVQQILRVNRGAELH
MFKEELGNVRNLLHSSAPSSFVGILSRGLLLPRVGVEQHGIQRTDIGNLGGGIYFSDSLS
TSVKYSKPSETDGTRLLLVCEVALGQCKDMHTRDFTLTSAPEGYNSVHGVRKSQKMHSDF
EDEEYVVYNTDQVRLKYVVQYSLEEDQVKEFQPHIDTFVNWHSSPGLDVCLFSDEGEGLG
VTKNPLENVTAGLLNSIGQTLPLQAVHIRCKLMDLLSQVIIFQTYTNNSDVPIEAKYVFP
LEETATVCGFEAFINGKHVIGKVKEKEQARKEYKQAIEKGHGAYLMDQDAPDVFTISVGN
LPPRATVLIKVTFITELVVRAGNIVFSLPGSVAPWQQSAALNQKTQSTVEKICVNELQPD
GEFSLSMSIEMPYEIQNLECSHRIKIKKTDCNAVVNTLPEQTLSSDGFQLSFTLSQIHMP
RMWVEKHPEKDTEACMLVFYPQFESGDASLSGVSDVVIVLDTSESMRGEAMLNARRLALK
VLNSLDRSLKVNIILFGTDYRQAFPSPMVLQEAFAEAKNFIMSSSAIGGSTELWRPLRSL
NLLPPSHGIRNVLILSDGHVQNQPQTLQLVRENAKHTRLFTCGLSPTANRHMLRALAQAG
GGANEFFDTKTKHTWAEKVNSQVRCMSSPGCSSVAVKWQQFNLAAPPPLQAPSQLCALFS
ECHTLVYGFVPHCTQATLFGDLSGQEIQTMVSTTELQKTKGTFLHKLTARAVIRDYEDGS
LASSEAEHEEKKAELKSYIIELSKEFSILSQFTSFVAIEERDQDQPDSGFTDVPKIIAEE
DVDILPYIGWTDEEKEEQILCDDLEEEEEEEEEEDEFDYCSADAYDGEMLFGSCGFSYKE
LTEEVPKMSLKMDTSIALEAFGASLSSEPVFQQEALQLFDETPESQGPSSIPTLPHAPSS
VFRKSYIGSVRSKACTIDLNGPKYHDDYNKPTGFGASSSAFGRSAAGFAWKKRDAPSLAS
AAQYRSFAAPCPPPPSFSNLFSTDSQYISTALPCPPPPPPFFSLLSLNTQCISTAPPCPP
PPPPPFSSPIPLDLSSHGYAPLIAGPAPLIAGPAPPIAALAPLKTGPAPLIAGPEHLIAR
PYPLIADLALMAGPPGLSSPTVYESKKRHKKCRSQPEIDMPRSYHTDKAYLRQTVIRMDC
LKDISYGILKAAPRECSIMQSDERPEQFRRPDEINWEELFDLQQQEGYWECSGALSRFLG
LDVDFFANVFLKEKGICSLGAKAHTDILRLVATMLVLQLIRVMKTAEGELFQSLFRLAEY
PEPRPTYWDAVKRAVDWACTTDRQYPCVCSRLELGWNWESCTRQLLGLDSLPTCSSLNAV
LQRNKGLTVM
NT seq 5253 nt   +upstreamnt  +downstreamnt
atggctatatttgatgactgctctgtggttttggacctgaagaatgtctcttataaagag
aagaagaagttaatgtcagctatattagacaatggagggaacatagcatatgtcgtgaac
cagaagtgttcctttgtggtggtgaccagcctagagaacctaagctgcagcaagcagagg
actgttctgaaacaccagacaccagtggtcagcccacagtatgtgtggagctgcctggaa
aaacagacgttacttcctgttgagaagcatattttaaaaccacagggctcagagccaaca
cctgaacagctttcacaagcagggctgaaggtgtccttccagttatcaaaaggactgatg
tccaaagctcaccagcaggagcaatcagaggttcaggcacatgatggcacatacctgata
gaacccagattttggaaggaaaataatcctaatgtatcagaattcccctcacattttcaa
gttgccaaatactccattttcagcaagctcaataaatggtcagtcctcgagctacagagt
gccaaaggccaagctgggcaggagtatcgtgttgtgaagtctgtcgtgcatgaggatgag
aagactgtaatgattgataaggagatgcgcagctccagctctgaggatgctctggacatg
tatctcataatgaataaagagctgcaggaccaaggctttacacagacacaaacacttcct
tcatgggccgaaaaactggcctccaatggcctccagcagcttttgttggaggagaagcta
aactgcggtacagtctcacaggaagtaggtgtctttttggaactcatctggaaagaagct
cttggttcactaaacaacatcctgaatgtccctgtcaccagcatcagtctcaatgatgtg
agcagggttgaaggtttgctgctgcaggcacaaaaaaatcagaacgaggatgtggtcgct
gctttactggatgaggtcaacaccctgttacctcttaatataccagagcctgattctaaa
aacaagcttgtgtctcagaaactcgatctctgccagctaatccgagacatcctaaacatg
actgagctgactttgggtaacccagatccatcctctctggggaagtatcgtgccctgagg
tgcagtgtagaacagatggccccggaaagtccagagtttcggtctgtcagccagctttta
caggataggccagctcaggtccagcagatactgcgtgtgaatcgaggggcagaacttcat
atgtttaaagaggagctgggtaacgttaggaaccttcttcattccagtgctcccagcagc
tttgtaggaatcctgtcacggggtttgttgttgccaagggttggagtagagcagcatggt
attcaaagaacagacatcggaaatctgggaggcggcatctactttagtgactccctaagc
acttctgttaagtattccaagcccagtgagaccgatggcacccggcttctgctggtgtgt
gaagtggctcttggtcagtgtaaagacatgcacactagggacttcactctgacctctgct
ccagagggatacaacagtgtgcacggagtccgcaagagccaaaaaatgcattctgatttt
gaggatgaagaatatgtggtgtataatacagaccaggtcagactgaaatatgttgttcag
tactcactggaggaggatcaggtgaaggagtttcagcctcacattgacacatttgtcaac
tggcattcttcaccaggccttgacgtctgcttatttagtgatgaaggagagggtttgggt
gtgactaagaaccctctggagaacgttactgctggtttgttgaacagcattggtcagaca
ctccctctgcaagctgtccatataaggtgtaagcttatggacctgctctcccaggtcatc
attttccagacttatacaaacaacagtgatgttcctatagaggcgaagtatgtgtttcct
ttagaagagacagcaacagtgtgtggtttcgaggcctttattaatggaaagcacgttatt
ggaaaggtcaaggaaaaggaacaggctcgtaaagaatacaagcaggctatagaaaaaggc
catggagcctacctgatggaccaggatgcacctgatgtgttcaccattagcgtagggaat
ctccccccaagagccacagtgctgatcaaagtgaccttcattaccgagctggttgtcaga
gcaggcaacatcgtcttctctctgccgggcagcgtggctccgtggcagcaaagtgctgca
ctgaatcagaaaacacagtctactgttgaaaaaatctgtgtgaacgagcttcagccagat
ggagaattctctttgagcatgtccattgagatgccttatgaaatccaaaacctggagtgc
tcacatcgcattaaaatcaagaaaacagattgtaatgctgtcgtgaacacactaccggaa
cagactctcagctctgatggtttccagctcagctttactctgtcacagatccatatgccg
agaatgtgggtggagaaacatccagagaaggatactgaggcctgcatgctggtgttttat
ccacaattcgagagcggtgatgcttctttatcaggtgtgagtgatgtggtaattgtgctg
gacacatcagagtccatgcgaggagaggccatgctaaacgcacgcaggcttgctctgaag
gttcttaactcactggatcgttcactgaaggtcaacatcattctgtttgggacagattac
agacaggcctttccatcaccgatggtgcttcaggaggcttttgcagaagccaagaatttt
attatgtcctcatctgccattggtggcagcaccgagctgtggagacctctgcgcagcctg
aacttactgcctccttctcatggtatcaggaatgtgctgattctttctgatgggcatgtg
caaaaccagccacagaccctgcagctggtcagagaaaacgccaagcacacacgactcttc
acctgcggcctcagcccaacagctaatcgtcacatgctgagagccctggcacaggcaggt
ggtggagccaatgagttttttgacacaaagacgaaacacacctgggctgagaaggtgaat
tctcaggtgaggtgcatgtcatctccaggctgcagttcagtggcagtaaagtggcagcag
ttcaatttggcagctccgcctcctcttcaagctccctcacagctctgcgcactcttcagt
gaatgtcacactctggtttacggctttgtgccgcactgcactcaggctaccctgttcggc
gatctgagtgggcaggaaatccagacaatggtttctactacagaactgcagaagactaaa
ggaacgttccttcacaagctaacagcaagagcagtcatcagagactatgaggatggcagt
cttgcttctagtgaggcagaacatgaggaaaagaaagcagagctgaaatcctacattatt
gagctcagtaaggagttttccattctgtcccagttcaccagctttgttgccatcgaggaa
agggaccaggaccagcctgactctggtttcactgatgttcctaagatcattgccgaagag
gatgtggatattctgccgtacattggctggacagatgaggagaaggaagagcaaatactt
tgtgatgatctagaagaagaggaagaagaagaagaagaggaagatgagtttgattattgt
agtgctgatgcatatgatggtgaaatgttgtttggctcatgtggtttttcatacaaggaa
ctgactgaagaggttcctaaaatgtctctcaagatggacacatcaattgcattggaagca
tttggagcatcactttcttctgagcctgtgttccaacaagaggctctacaattatttgac
gaaacacctgaatctcagggcccctcttctattccaacattaccccatgctcctagctct
gtatttagaaaatcctatattggatcagtaaggtctaaggcttgtacaattgacctaaat
gggcccaagtatcatgatgattataataaaccaactggttttggagcatcatcttctgca
ttcggccgttctgcagctggttttgcttggaaaaagagagatgctccttctttggcgtct
gctgctcaatacaggtcttttgctgctccatgtcctcctcctccttccttttctaatctc
ttttctactgattctcaatacatttctactgctcttccatgtcctcctcctcctcctccc
tttttttctcttctttctcttaatactcagtgcatttctactgctcctccatgtcctcct
cctcctcctcctccattttcttctcctattcctcttgatttgtcctcacacggctatgct
cctctcatagctggtcctgctcctctcatagctggtcctgctcctcccatagctgctctt
gctcctctcaaaactggtcctgctcctctcatagctggtcctgaacatctcatagctcgt
ccttatcctctcatagctgatcttgctctcatggctggtcctccaggtctttcttctccc
actgtatacgagtcaaagaaacgtcacaaaaaatgcaggtctcaacctgaaatagacatg
ccacgctcatatcatacagataaagcatacctcagacagactgtaattcgtatggactgt
ctcaaagacatttcatatggaattctcaaagcagctcctcgggagtgcagcataatgcag
agcgacgaaaggccagaacaattcagaagacctgacgagatcaactgggaagagcttttt
gaccttcaacaacaggaaggttactgggaatgcagtggtgctctgagtagattcctgggc
ctggatgttgacttctttgccaatgtcttcctgaaagagaaaggcatctgttccttgggt
gcaaaggcccatactgacatcttgaggctggtggccacaatgctggtgctgcagctgata
cgggtgatgaagacagcagaaggggagctgttccagtctcttttccgccttgctgaatac
cccgaacccaggccgacatactgggatgcagtaaagagagcggtggactgggcgtgcacg
acagacagacagtacccgtgtgtgtgcagtagactggagcttggctggaactgggagtcc
tgcacacgccagctgctgggtttggactcacttcctacctgctcttctctgaatgctgtg
cttcagagaaacaaaggcctaacagtcatgtag

DBGET integrated database retrieval system