Trichomycterus rosablanca: 134324001
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Entry
134324001 CDS
T09921
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trn03016
]
134324001 (lcmt2)
Enzymes [BR:
trn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
134324001 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
134324001 (lcmt2)
Transfer RNA biogenesis [BR:
trn03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
134324001 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_3
Kelch_1
RAG2
Motif
Other DBs
NCBI-GeneID:
134324001
NCBI-ProteinID:
XP_062861712
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Position
12:22682794..22706023
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AA seq
680 aa
AA seq
DB search
MPVTKNKNPGKDTAVQGTNDSSVVSKVSAAAQGYFKDELLQHFVSKVSRRTALINRGYYV
RWKAVDHCVKQFLCATNTCARRQILSLGAGFDSLYFRLHAEEALQNVIIFEVDFPDVARR
KAALINGSNLLKATISDWDHLAQTGPAYVSSVHYKLLGVDLRKEKELEDVLHRAGLHWNC
PTLVLSEVVLTYMETQWSDAVIGWAARNLPQAMFVMYEQIRPNDPFGIVMQNHFLKLNSK
IHALCQYPNTFAQTQRFLQKDWEECVCMDMNQFFFSLLTDDERERVEKLEPFDEFEEWHQ
KCSHYFILTASNGSLTRQALLTLPSETPIPLIKLTLDQYSMSVQLMTESQCVEAVGMASS
MLEPRLLLLTGGCGRQGRNSTAMLLMREHAGWRHAVIEPEGQKCVRLYHTMTSVPGGGAV
ILGGRTSPLNPIDSILKVTCSLRDKHNPKVLVSINEMVCTGPAPIPRWRHTATLLIFEDR
NYLFVFGGRTERELVLGDSHFLSLEDQHWVNIPLEGCFPKPRHSHSACPYKGGLVMFGGL
GKGGVPLGDIFLLKPTCIGFCWERLHVHPALVPRYSHTAHVIGENLVVVGGVWLQSAGVP
GVAIINLISRNSVEISIDTSSVPWPLMLHSFCSELLDSEGTEVVLIGGGGSCFSFGTHFN
AQPVTLDLSPMLCNKAPLDS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcaccaaaaacaagaacccgggaaaagacacagcagtacagggcacaaatgac
agcagtgtggtaagcaaagtgtccgctgcagctcaaggctactttaaagatgaacttctt
caacattttgtgtctaaggtgtcacgaagaactgctcttattaacaggggctattatgtt
cgctggaaagctgtagaccactgtgtgaaacagtttctgtgtgctactaacacctgtgct
agaagacagatcctgtcactgggtgctggcttcgattccctctattttcgactgcatgca
gaggaagctctgcagaatgttatcatatttgaggtggacttccctgatgtcgccagacgc
aaggctgcattaattaatggcagcaatcttctgaaagcaactatatcagattgggaccac
ttagcacagactggcccagcatacgtgagcagtgttcattataagctactaggtgtggat
cttagaaaggaaaaagagcttgaagatgttctacatagagctggactacactggaactgt
cctactcttgttctttccgaggtggtgctcacctatatggaaacacagtggtcagatgct
gtaattgggtgggcagcaaggaacctcccacaggctatgtttgtgatgtatgagcagatc
cgcccaaatgatccctttggaatcgttatgcagaaccacttcctgaaactcaactccaaa
atacatgcgctctgccaatacccaaacaccttcgcacagacccagagatttctgcaaaag
gactgggaggaatgtgtgtgcatggatatgaaccagttctttttcagtcttttaacggat
gatgagagagaaagagtagagaagttggaaccttttgatgaatttgaggaatggcatcag
aagtgctcacactattttattctcaccgcctccaatggctctctgaccagacaagcactt
ctcactcttccatcagagacccccattcctctgataaaacttactctggaccagtactcc
atgtctgtgcagctcatgactgaaagtcaatgtgtggaggctgtaggaatggcctcttca
atgctggaacccaggttgctgctcctcacaggtggttgtgggagacaaggtcgaaactct
acagctatgcttctgatgagagagcatgcgggctggagacatgctgttatagaacctgag
ggacagaaatgtgtacgactatatcacacaatgacctctgtccctggaggtggtgctgtc
attctgggtggtagaacctctccacttaaccccattgatagcatactaaaagtcacatgt
agcctgagagacaagcataacccaaaagtgttggtgtccataaatgagatggtttgtacc
ggccctgccccaataccaagatggaggcatacagctaccttgctgatttttgaggacagg
aactatttatttgtgtttggaggtcgtactgaaagagagcttgttctaggtgattcacac
tttctcagtttagaagaccagcactgggtgaatattccacttgaaggctgtttcccaaag
ccacgtcactctcactcagcatgtccttataaaggaggactggtaatgtttggaggtctg
ggcaaaggaggtgtcccactaggagacattttcttgctgaagcccacatgcataggcttc
tgctgggaaagactacatgtacatcctgccctggtaccaaggtattctcacacagcccat
gtgattggtgagaatcttgtggtagttggtggagtctggctacagtcagctggtgtacca
ggagttgctataataaacctgattagcagaaactctgttgaaatcagtattgatacgtct
tctgtcccctggcccctcatgctgcattctttctgctcagagctgctggattctgagggg
actgaggtggttctcattggtggtgggggatcctgcttctccttcggcacccactttaac
gctcagcctgttactctggacctgagccccatgctttgtaacaaagcacctttggattcg
tag
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