Trichomycterus rosablanca: 134324041
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Entry
134324041 CDS
T09921
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
trn
Trichomycterus rosablanca
Pathway
trn04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134324041 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
trn04050
]
134324041 (edar)
Cytokine receptors [BR:
trn04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
134324041 (edar)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
SCIMP
TNFR_c6
Psg1
CytochromB561_N
DUF4010
Motif
Other DBs
NCBI-GeneID:
134324041
NCBI-ProteinID:
XP_062861762
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All DBs
Position
12:33372107..33390320
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AA seq
489 aa
AA seq
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MASPDKALESNEKLLVCFPLRRGVMVRTRHTFESCLVSLLLASSVYRLNAEYSSCGENEF
YNHSSSSCRPCPQCQPGKEPYMNCGYGVKDEDYNCVPCPPGKFSRGKYEICRRHKDCDAL
YRATVLISGTKESDAECGPCLPGYYILENRPRNIYGMVCHSCQNSPRNTKECMQTVSSKL
GSGVSSTSTTTFPHAEKDPTGQGHLATALIIAMSTIFIMAIAIVMIIMFYILKAKPNGQA
CCASQLVKTIEAPTNKQEEKKEVQENVAIFTEKDEFKPPPPPKTVKSENDASSENEQLLS
RSIDSDEEAAQEKQEVTDLCLLSLVIPRDTVCSNNHTNNNCTINNCTNNNNCTNSSKTVG
IHSRRKKILDLYTKACNVTEGQSPVELPFDCLERTSRMLSTTYSAEKALVRTWRHLAESF
GLKRDEIGGMTDGMQLFDRISTAGYSIPDLLARLVQIERLDVVEALCFDILGAPTSGQQL
IISSRCASV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcccgacaaagccctggagtctaatgaaaagcttcttgtgtgttttcctctc
aggaggggcgtgatggtccgaacaaggcacacgtttgaatcctgcctcgtctcgctgctg
ttggcctctagtgtttatcgtctaaacgctgaatactccagctgtggagaaaatgaattc
tacaaccacagcagcagcagctgtcggccatgcccacagtgccaaccaggaaaagaacca
tacatgaactgtggatatggtgttaaagatgaggactataactgtgtgccgtgcccacca
gggaaattctccaggggtaaatatgaaatttgccgtcgtcataaagactgtgatgctctg
tacagagcgacagtgctgatatcagggactaaagagagcgacgcagagtgtggaccctgt
ttacctgggtactacattttggaaaatcgtcccagaaacatctatggcatggtgtgtcat
tcctgtcagaactctccacgaaacaccaaagagtgtatgcaaacagtttcatcaaaactt
ggatctggagtatcgtccaccagcaccaccacgtttcctcatgcagagaaagatccaaca
ggacagggtcacctagcaacagcgctcatcattgctatgtcaaccatcttcatcatggcc
atcgctatagtaatgatcatcatgttctacattctaaaagccaagccaaatggtcaagca
tgctgtgcgagtcagcttgtaaaaaccatagaggctccaacaaacaagcaggaggagaag
aaagaggttcaagaaaatgttgctatatttacagagaaggatgagtttaaacctccacct
cctccaaaaactgtgaaaagtgaaaacgatgcatcatcagagaacgagcagctgttgagt
cgaagcatcgacagtgacgaggaagcagcacaggaaaaacaggaagtgactgatctgtgt
cttttatcactcgttatcccacgagatacagtctgctcaaacaaccacaccaacaacaac
tgcacaatcaacaactgcaccaacaacaacaactgcaccaacagcagcaaaacagtgggg
attcacagtcggcggaaaaaaatcctggatttgtacaccaaagcctgcaatgttacagag
ggtcagagtcccgtggagttgcccttcgactgcctggagcgaacaagccgcatgttgagc
accacctacagtgcagagaaggcgttagtcaggacgtggcgtcacctggctgagagtttc
ggactaaagcgtgatgaaatcggagggatgaccgatggcatgcaactgtttgaccgaatc
agcacagctggatacagcatcccggacctgctagcaagactcgtccagatcgagaggttg
gacgtggtggaagcgctatgcttcgatattcttggagcacccacttctggccaacagcta
atcatttcttcccgttgtgccagtgtttga
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