Trichomycterus rosablanca: 134324109
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Entry
134324109 CDS
T09921
Name
(RefSeq) TBC1 domain family member 8
KO
K19951
TBC1 domain family member 8/9
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134324109
Membrane trafficking [BR:
trn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134324109
Endosome - Golgi transport
Rab GTPases and associated proteins
134324109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_6
EF-hand_7
EF-hand_1
EF_EFCAB10_C
Motif
Other DBs
NCBI-GeneID:
134324109
NCBI-ProteinID:
XP_062861835
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All DBs
Position
12:complement(30577368..30602894)
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AA seq
1059 aa
AA seq
DB search
MWLNPAEVSLKTALNLWITEKSNDYFLLQRRRGHGDTGGKITGMLVGALDTVLDSTARVA
PFRILLQVPGSQVSWIIASGAMSEEVQKHWKWLDQNLLPYMSVFENKQDAAIFVKGKVKG
LIAEEVLVGQAAQEDDPTRFREAMVRFEQRFGLPSREKLVAHYSCCCWKGRVPRQGWLYL
STNHLAFYSFLLGKEVKLLIPWADVTSLERATFGLINDAIRVRTRQKQREFSMFLDADEV
MTVLTQLADMALRRLFDNAPKEPDASITKRALEQQALRQYVLSLFGLPRSEILQEVMRCS
AWTPHARCHTAGNLYVIENYIAFNSLHEGQCILLIPLAEVQSIEKAESTGALPNPVIISV
RSKRAFQLIEVTHRDQLVDSLNSRLRVLHWQSQQKKTLISPSPYYTFCYDTEDTLQPIVL
EEALITTFQTSQSESSEHRRLWDEHFEEFGRGVHMFRTEATRKLVAAGIPKSLRGEMWLT
FSDTYSSLNTHPHYYSNLLERRTNEHTSDEIERDLRRSLPEHAAFQSETGISALRRVLNA
YALRNPGIGYCQSMNILASVLLLYTREEEAFWLLVTVCERMLPDYFNLRVIGAQVDRSVF
EELIRERLPHLAERVPDLSSLSSLSLSWFLALFLSVVPFCSGLRILDCFFFHGVKVIFQL
GLAVLDANVDEICASTDDGQALMTLTSFLEQVRDDDEMCGCTEETGPAGHTHISTLINDA
YEKFGDLTVKQLEKMRSRHRIQVLQSHEDTNKENALRLLSANVSLSQEILSDLYDLFKTE
HFVNLYWGDEACSAPTVKYQVDRAQFKSLYQLLMPWQCGSHADTMAQRTFNLLDQDGQNR
ITFSQFAQWIDTLYCEDLNERIRLLYRLHIPPALTENEDNPSPVKSPILSTTRPLYVNLP
NGERKSYEEQLKQMLKDLAKEKDKGLEKPLPPMKQREFVQFCKTLCSMFYGHPGENELFQ
AIAMVTSLVLQIGEAGHKAAEQIKSDQATSGSSMENVSEAEGSWTVSFEQILASLLTEQV
LVNFLETSEDLSMKIASAKEKQYQQRSGLLMIQHEMSLG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaatccggccgaggtttctctgaaaacagcgcttaacctgtggatcacagag
aagtctaacgattattttctcctgcagcggaggagggggcatggagataccgggggcaaa
atcactggtatgttggtgggagcattggatactgtattggactcaactgctcgagttgct
cccttccgaatccttctgcaagtgccgggttcacaggtcagctggatcattgctagtgga
gccatgtctgaagaagttcagaaacactggaaatggctggatcagaacttgttgccatac
atgtctgtgttcgagaacaaacaggatgcagcgatctttgtgaagggcaaagtcaagggc
ctaattgcagaggaagtgctagttggccaggcggcacaggaagatgaccctacacgattc
cgtgaggcgatggtgcgattcgagcagcgatttggccttccatcaagagagaaattggtg
gctcattactcctgctgctgctggaaaggacgagtaccacgccagggctggctctacctt
tccactaatcacctggctttctactcattcctgcttggaaaagaggtgaaactactgatc
ccgtgggcagacgtcacgtctctggagcgtgcaacattcggcctcataaacgacgcgatc
cgggttcgaactcgccaaaaacagcgagaattctctatgtttcttgatgcagacgaagtg
atgaccgtgttgactcagctagccgatatggccttacgaaggctgtttgataacgcccct
aaagaaccagatgccagtattaccaaaagagcactggagcagcaggctctgcgccagtat
gtgctctctctctttggcctgccacgttcagagatactgcaggaagtgatgcgatgctca
gcatggacgcctcacgcccggtgtcacacagcaggaaatctctatgttattgaaaactac
atagcattcaacagccttcatgagggacagtgcatccttcttataccacttgcagaggtg
cagtccattgagaaagcagaaagcacaggcgcactcccaaacccagtcatcatcagcgtg
cgctcaaaacgagcgttccagctgattgaagtgacacatcgcgatcagcttgtggacagt
ctgaattcccgcctacgtgtcctgcactggcaaagtcagcagaaaaaaaccctgatttcc
ccctctccatattacaccttctgctatgatacagaggacacactccagcccatagttctc
gaggaagcgctgatcaccacattccagaccagccaatcagaatcttctgagcacaggcgc
ctgtgggatgagcactttgaagagtttggtcgtggtgtacatatgttccgcactgaggca
actagaaagctggtggctgctggaatcccaaaatctttacgtggagagatgtggcttacc
ttttcagacacttactcatctttgaacactcaccctcattattactccaatctgctggaa
agaagaacaaacgagcacacaagtgatgagatcgagagggaccttcggcgctcgctaccc
gaacatgcggcattccagagcgaaacgggtatttctgcactgcggcgtgtcctgaatgcc
tacgccctccgcaacccgggtattggctactgccagtctatgaacatcctagcatcagtg
ttgctgctctacactcgagaagaagaagctttttggttgctggtaacagtgtgtgaaaga
atgctgcctgattatttcaacctcagagtcattggtgctcaggtggaccgctctgtgttt
gaggagctaattcgtgagcgattgccacacctagccgaacgtgttccagatctttcgtcc
ctctcctcgctctcgctctcctggttcctggctctgttcctcagtgtggtaccattctgt
agcggcctgcgcatcctcgattgtttcttcttccacggtgttaaagtcatttttcagctc
ggacttgctgtgcttgatgctaacgttgatgaaatttgcgccagcactgatgatggtcaa
gctttgatgactcttactagtttccttgagcaggtcagagacgatgatgaaatgtgtggt
tgtactgaggagacggggcctgcgggacacactcacatcagcactttaattaacgatgca
tatgagaaatttggagatctgacagtgaagcagctggagaagatgagatccaggcacaga
attcaagttcttcagtcccatgaggacaccaacaaagaaaacgctcttcggctcttatca
gccaacgtttctctctcccaggagattctgtcagatctttatgacctttttaagacagag
catttcgttaacctgtactggggagatgaagcgtgttctgcccccactgtaaaataccaa
gtggatcgagcccagtttaagagtctgtaccagttgttaatgccctggcagtgtggatca
catgcagatacaatggcacaaagaacgttcaacctgctggaccaagacgggcaaaaccgc
atcacatttagccagtttgcccagtggatcgacacgctgtactgtgaagatttgaacgaa
aggatcagactgctttatcgtcttcacattccacctgcactgactgagaatgaagataat
ccctctcctgtgaaaagccccatcctttctactaccagacctctttatgtgaacctgcca
aatggggagagaaaaagctatgaggagcagctgaaacagatgcttaaggatttagccaaa
gagaaagacaaaggtctggagaaaccccttcctccaatgaaacagcgggagtttgtccag
ttttgcaagacactgtgcagcatgttttacggccaccctggtgaaaacgaactcttccag
gccatcgcaatggtcaccagtctagtgctgcagatcggtgaggctgggcacaaggcagca
gagcaaataaaatctgaccaggcaacctctggttcatctatggaaaatgtctcagaggct
gaaggttcttggacggtgagttttgagcagatactggcctcactgctaactgagcaagtg
ctggttaacttcctcgagacatcagaggatctcagcatgaagattgcatctgcaaaagag
aagcagtaccagcaacgctcaggtctgctgatgatccagcatgagatgagcttagggtag
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integrated database retrieval system
