Trichomycterus rosablanca: 134324178
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Entry
134324178 CDS
T09921
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134324178 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134324178 (hspd1)
03110 Chaperones and folding catalysts [BR:
trn03110
]
134324178 (hspd1)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134324178 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134324178 (hspd1)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
134324178 (hspd1)
Messenger RNA biogenesis [BR:
trn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
134324178 (hspd1)
Chaperones and folding catalysts [BR:
trn03110
]
Heat shock proteins
HSP60 / Chaperonin
134324178 (hspd1)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
134324178 (hspd1)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134324178 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
134324178 (hspd1)
Exosomal proteins of breast cancer cells
134324178 (hspd1)
Exosomal proteins of colorectal cancer cells
134324178 (hspd1)
Exosomal proteins of bladder cancer cells
134324178 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
134324178
NCBI-ProteinID:
XP_062861942
LinkDB
All DBs
Position
12:complement(32012116..32019840)
Genome browser
AA seq
574 aa
AA seq
DB search
MLRLPSMMKQMRPVCRALAPHLTRAYAKDVKFGAEARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDKIIKGANPVEIRRGVMLAVETVINELKKLSKPVTTPEEIAQVATLSANGDN
EVGTIISDAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTTKGQKCEFQ
DAYLLLSEKKISSVQSIVPALELANQHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLLDMAIATGGTVFGDEAMGLAIEDIQVHDFGRVGEVVVTKDDTMLLKG
RGDPAAVEKRAAEIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDTIKPANEDQKVGIDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQNAPEIGYDALNDEYVNMVERGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTELPKEEKEMPGGMGGMGGMGGMGGMGF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcttgcccagtatgatgaaacagatgaggccagtgtgcagggcactggctcca
caccttactcgtgcctacgccaaggatgtaaagttcggagcagaagcccgggcgctgatg
cttcagggtgtggatctgctggcagatgcagtggctgtcacaatgggaccaaagggtcgg
acagtcattattgagcagagctggggcagcccaaaggtcaccaaagatggtgttacagta
gccaaaagcattgacctgaaggacaagtacaagaacattggagcaaagctggtgcaggat
gtggccaacaacactaacgaggaggcgggtgatggcaccaccaccgccaccgtcctggcc
cgtgccatcgccaaggagggctttgacaaaattatcaagggtgctaacccggtggagatt
cgcagaggagtcatgcttgctgtggaaaccgtcatcaacgagcttaagaaactgtccaag
ccagtcaccacacctgaagaaattgcccaggtggccactctttctgccaacggagacaat
gaagttggcaccatcatctcagatgctatgaagaaagtgggccgtaaaggagtcatcaca
gtaaaggatggcaaaactcttcatgatgagctggagattattgaaggcatgaagtttgac
cgtggctacatctcgccctactttatcaacacaaccaaaggtcaaaagtgtgagttccag
gatgcttatctgcttctgagtgagaagaaaatttccagcgtccagagcattgtgccagct
ctggaactggccaaccagcaccgtaaacccctggtcatcatagctgaggatgttgacgga
gaagccctcagcactcttgtccttaacaggttaaaggttggcctgcaggttgtagcagta
aaggctccaggctttggagacaacaggaaaaaccagctgctagatatggcaatcgctaca
ggaggcacagtgtttggagatgaggctatgggactagccatcgaggacatccaggttcac
gattttggccgtgttggtgaggtggttgtaaccaaggatgacaccatgttgctgaagggt
cgtggtgatccagctgctgtcgagaagcgtgctgctgagattgcagagcagttggagaac
accaccagcgactacgagaaggagaaactgaacgagcgtcttgccaagctgtcggacgga
gtggctgtgctgaaggttggcgggacaagcgatgtggaggtgaacgagaagaaagacaga
gttacagatgctcttaacgctaccagagccgctgtagaggagggcatcgttcttggaggc
ggctgtgctcttctccgctgcattcctgctttggataccatcaaacctgccaacgaggac
cagaaagttggtattgacatcatccgcagagccctgcgcatccctgccatgaccattgcc
aagaacgcaggagtggaaggctctctggtggtggagaagatcctacagaatgccccagaa
attggctatgatgcactgaacgatgaatacgtaaacatggtggaaagaggcatcatcgac
cccactaaggtggtgaggacggcgctcctggacgctgctggtgtcgcttccctgctttcg
acagccgaggctgtggtcactgagctgcccaaagaagagaaggagatgccagggggcatg
ggtggcatgggcggtatgggtggcatgggcggtatgggattctaa
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