Trichomycterus rosablanca: 134324222
Help
Entry
134324222 CDS
T09921
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
trn
Trichomycterus rosablanca
Pathway
trn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134324222 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134324222 (gtf2e1)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
134324222 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
134324222 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
DUF8512
Cas12f1-like_TNB
YmcF-like
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
134324222
NCBI-ProteinID:
XP_062862006
LinkDB
All DBs
Position
12:complement(22656905..22682101)
Genome browser
AA seq
443 aa
AA seq
DB search
MTEPEIQTEVPKALKILAKQVVRGFYGIEHALALDVLIRHPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFVKCRMRVETAPDGKTSRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCHSTFTDLEANQLFDPMTGTFHCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRDTEDINLSHELLEPEPTEIPALKQSRERTALAGGPAGAGAPGRGVWKT
GPSYEDLYTQNVVISMEEQETQQGQAVEGKVPKERPVWLTQSTVQGADSETGSLKTTVED
SMVTHEGKAGHDQAQDENEEVMRALLIHEKKSGVPSVGGAAHRPIILQSNASDSESDTSE
SDEDFPSEAAVALPKRARLDDDDEEEEDEDFEVVGDDAVVMVGGRSFSYREVSQKPELVE
QMTAQEKEAYIEMGQKLFQDMYY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaccagagatccaaacagaggtgccaaaggccctgaagatcctggccaagcaa
gtggtaaggggcttctatggcatcgagcatgcactggcgctggatgttctgatccgtcat
ccatgtgtacgtgaggaggacatgcttgagcttctgaagtttgaccgcaagcagctgcga
tcagtgctcaacacgctgaagggggacaagtttgtcaagtgtcgcatgcgtgtggaaaca
gcaccagatggcaagacctcacgccacaactactacttcattaactaccggttgctggtc
aatgtggtcaaatacaaactggaccacatgcgccgccgcatcgagacagatgagcgagac
tcaaccaacagggcatctttccgctgcccctgctgccacagcacttttactgacctggag
gcaaatcagctatttgatcccatgacaggaacattccattgtactttctgccaaactgaa
gtggaagaagatgagtccgctgtaccaaagaaagatgctcgaacactggttgcccgattt
aatgagcagattgaacctatttatgtgttgctgcgagacacagaagatataaatctgtca
catgaactgctagagcccgaacctacagaaatcccagccttaaaacagagtcgggagcgt
acagctttagccggaggtccagcaggtgccggcgcaccaggtcggggggtctggaaaact
ggtccgtcatatgaggatctgtacacgcagaatgtggtgatcagcatggaggagcaggag
acccagcaaggccaggcagtagagggcaaagtccccaaagaaagaccagtgtggcttact
cagagcaccgtgcagggtgctgacagcgagaccgggtccctaaagaccactgttgaagac
tcaatggtaacacatgaaggtaaggctggccatgaccaagcacaggatgagaacgaagaa
gtgatgcgcgcactccttatccatgagaagaaaagcggggtgccatcagtgggcggagct
gcccaccggcccatcattttgcagtcaaatgctagcgactcggaaagcgacaccagtgaa
tcagacgaggactttccttccgaggcagcagtagccctacccaagcgggctcgactggat
gatgatgatgaggaggaggaggatgaagactttgaggtggtgggagatgatgctgtggtg
atggtaggaggaagatcgttctcctacagggaggttagccagaagccagagctggtagag
cagatgaccgcacaggagaaggaggcttacattgagatgggccaaaaacttttccaggac
atgtactactaa
DBGET
integrated database retrieval system
