Trichomycterus rosablanca: 134324301
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Entry
134324301 CDS
T09921
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134324301 (aff3)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134324301 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
134324301
NCBI-ProteinID:
XP_062862127
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All DBs
Position
12:complement(13282890..13313341)
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AA seq
1169 aa
AA seq
DB search
MTHSWPSQQPPGGGGPERFLYSDSKEAKRHSSQHKNVQNDTSISKPRVAPHKSMLADDLK
LSSDEDDGDKGPQQNASWAENHNRPGQRAHTHGGRARHSSSGSSGSDSTSESESSSQRSR
SPSPEIPIQTEIVSQPQPSTYIKETQDSSLTHWQLDKWLERVRKNRHSVDDDARGSKSSG
AALDSDRGPSPGGYWERDSGFGTRQSYSPGQSPVPSPKFDYSPRHSRRSSLEYSPCPSPG
SSPVPSPVPSVCPSPGASLRISRSPSPLPLHPPKSPSPSLNSAPASPRHTFYSQDSKTFQ
ESSRFPAQPRLSSSPVCQPKVKSWVLQDQSTDLIINFKPKDSRPTAPPHNTSKHSSTHKE
TPHRPKSTEYRSKSTDCPVPHHSHSSSRSALKIKARHLSFTDHSTEHSRRPGEPNKFNQS
FNSKPKHSPTTKSKDHIESNTHLIHNPSSRPSNRPAPEVPGRSVSKPSSRRSPSPKPKAR
LKEVPVSSGRPSQKERKPKNQEQDVHSRSKVQGEALVQATESQRHGRLAEEQLIRHRWAR
SSEEEEHKRRKEQVERERKRRRKEHNAEWQAVQPKQRPHTNSQHQTQTEHSVPERGEQHR
KKRRSSEDQSSHNEVIDNPSPPLSPPSPSSIVRPTHRPSTSSSSSSSSSSSSSSSDSDSE
PSHPPNVAKVPADSTSSQRPAPKRRHQEQCRPAELRTNAISTDEGQQHRGKHKLYTLVPF
GRTEKSTAVSHRGLRNLVVKIDLSLLTRVPSTSEDSQRGSSSSSSSQASAKEKTSMRHQY
HHEESGDAKSKRKAENREAQRESKKSHLHTEKPSAPKYSAEGENQESRFNSKQNGHLGEY
IYTNRPLSPLSPSTGVKVQNEDQKHIHTPKDESGVKKTQMQKARPKIEAEFLGVLGNTQP
PPGSWAPSATQPTYFRRTVPYTDVSHHAEYYMHEAKRLKHRADAMVDKLGKAVNYIDAAL
SFMECGKAMEEGPLEAKSPHTMYAETVELIRYAMRLKSHTSPGARQEDKQLAVLCFRCLA
LLYWQMFRLKKDHALKYSKALTDYFKSSPKVPHTASSWNDATKGSIVPPSYISPVGLIGT
QNGSSPSSPFINIPQRIHQMAANHLNITNSVLYSYEYWEVADNLAKENKEFFNYLNTLTG
PLTLHSSMAHIVQYARQGLQWIRISANLS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgacccactcctggccttcccagcagcccccagggggtggggggcctgaacgattccta
tattcagattctaaggaggcgaaacgacatagctcacaacataaaaatgtgcaaaatgac
acttctattagcaagccccgtgtggcccctcacaaatccatgcttgccgatgacctgaag
cttagcagtgatgaggatgacggtgacaagggacctcagcaaaatgcttcctgggctgaa
aaccacaatcggccggggcagcgcgcacacacacatggcgggagggcgagacattccagc
tcaggctcctcaggatctgattccaccagtgagtcggagagcagtagccagcggtcacgc
agcccaagcccagaaataccaattcagactgagatagtcagccaaccccagccttctacc
tacatcaaggaaacacaggactcatctttgacgcactggcagctggacaagtggcttgag
agagttcgtaaaaacagacactcggtggatgacgacgcaagaggaagtaaaagctctggt
gctgctctggattctgatcgaggaccatctccaggaggatactgggaaagagattctggt
tttgggacaagacaaagctacagcccaggtcaaagccctgtgcctagccctaagtttgac
tacagccctaggcacagtcgtcgatctagtctggaatatagcccttgcccaagtcctgga
agtagtccggtgccaagtccagtgcccagtgtttgccctagcccaggtgccagcttaagg
attagccgaagtcccagtcctttaccccttcatccacccaaaagccccagtcccagcctg
aactctgctcctgcctctccaagacacactttttattctcaggattcaaaaactttccag
gaaagctccaggtttcctgcacagcctaggttgtcctccagtcctgtatgtcagccaaaa
gtcaagtcatgggtactacaagatcaaagcactgaccttattattaactttaaacccaaa
gattccagaccaactgcccctccacacaatacttccaaacacagctcaactcacaaagag
actccacacagacctaaaagcactgaatacagatctaagtccactgattgtcctgttcca
catcactctcattctagttccaggtcggcccttaaaataaaagctagacacttgtctttt
actgaccacagcactgagcatagccgtagacctggtgaacccaacaaattcaaccagagt
ttcaactcaaaaccaaagcacagtcctacaacaaaatcaaaagaccacattgagtcgaac
acccacttaatccacaatcccagttctaggccttcaaatcggcctgcaccagaggttcca
ggtaggtcagtctcaaaacctagctctaggcgtagcccaagtccaaaaccaaaagcaaga
ttaaaggaggtccctgtgtccagtggcaggccctctcagaaagaacgaaagccaaagaac
caagagcaggacgttcacagtcgtagtaaggtccagggagaagccctggtccaagctaca
gaatctcaaagacacgggagactggcggaggagcagctaataaggcatcgctgggctcga
agttctgaagaagaggaacacaagaggagaaaagagcaagtagagagagagaggaagagg
aggaggaaagagcataatgctgaatggcaggcggtacagcccaagcagagaccacacaca
aacagtcagcatcagacccaaactgaacacagtgtacctgaacgaggggagcaacacagg
aaaaagaggagaagcagtgaagaccagtcctctcataatgaagtcatagacaatccatct
cccccgctgtctccaccctccccttcttccattgtccgccccacacatcgaccttctacc
tcttcttcctcttcttcctcctcgtcttcctcctcatcttcctcagattcagactctgag
cccagtcaccctccaaatgttgctaaagttcctgcagattcaacttctagtcagcgacct
gcaccaaagcgaaggcatcaagagcagtgtagacctgcagagttaaggacaaatgccatt
tccacagatgaagggcagcaacatcgaggcaaacacaaactgtacacacttgtgccgttc
ggccgtactgagaagtccactgctgtctctcatcgaggactgagaaatctggttgtaaag
atagacctttcccttctgaccagagtcccaagtacaagtgaggactcacagagagggtca
tcgtcatcttcatcctcacaggcatcagctaaagaaaagacctccatgaggcaccagtac
catcacgaggaatctggtgatgccaagagtaaacgaaaggctgagaatagagaggctcaa
agagaaagtaagaaaagccatcttcacacagaaaagccttcagctcccaaatactcagct
gagggtgaaaatcaggaaagtcgcttcaacagcaaacagaatgggcatcttggggagtat
atatacaccaataggccgctgtccccactctctccttcaactggtgtaaaggtgcagaat
gaagaccagaaacacatacacaccccaaaagacgaatctggagtgaaaaaaacacagatg
cagaaagcacggcccaagatcgaagcagagtttctgggtgtcttaggaaacacacagccg
ccacctgggtcctgggccccttctgcgacccagccaacatacttcagaagaactgtgcct
tacactgatgtttcacaccatgctgagtactacatgcacgaggccaaaagactgaaacat
cgagcagatgctatggtggataaactcgggaaagctgtaaattacatagatgctgctttg
tcctttatggagtgtggtaaagccatggaggaagggcctctggaggccaaatctcctcat
accatgtatgcagaaactgtggagctaataagatatgcaatgaggctgaagagccacaca
agccctggagccaggcaggaggacaaacagctggctgtgctttgttttcgttgtcttgct
cttctgtactggcaaatgttccggctgaaaaaagaccatgctctgaaatattctaaagcc
ctgacagactacttcaagagctctccaaaagtgcctcacacagcatcctcctggaacgac
gccacaaagggaagtattgtgcctccgtcatacatatcccctgttggtttaattggaacc
cagaatggcagctccccctcctcccctttcatcaacattccccaacgtatccaccagatg
gcagcaaaccaccttaatatcaccaacagtgtgctttatagttatgagtactgggaggtt
gctgataacttagcaaaggaaaacaaagagttctttaactacctgaacactttgactgga
cccctaactctgcacagcagcatggctcatatagtccagtacgccagacagggactgcag
tggatacggatcagtgccaatctatcttaa
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