Trichomycterus rosablanca: 134324332
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Entry
134324332 CDS
T09921
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
trn
Trichomycterus rosablanca
Pathway
trn04060
Cytokine-cytokine receptor interaction
trn04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134324332 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
134324332 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
trn04052
]
134324332 (tnfsf13b)
04090 CD molecules [BR:
trn04090
]
134324332 (tnfsf13b)
Cytokines and neuropeptides [BR:
trn04052
]
Cytokines
Tumor necrosis fators
134324332 (tnfsf13b)
CD molecules [BR:
trn04090
]
Proteins
134324332 (tnfsf13b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
134324332
NCBI-ProteinID:
XP_062862205
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All DBs
Position
12:complement(14152442..14169486)
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AA seq
276 aa
AA seq
DB search
MPGISAAPDRIESRRISWAVVVMILVAITSSSLSALSLYHVLALQAEVEGLRSEVTRRRD
ECRDTPEENVKGPQQQHEDHRSKGQILPESSSEAPQKLDTEASGRQQEQFSLKKRSVELF
QPCLQMIGDKKRKVFQKDFELQQHTGIPWQMGLMRGSALEQYEDSIVVKEEGYYFIYSQV
EHYDPPVTKVYYKDPTYAMGHIVIRIKKNVVGDESQQVVLFRCIKSMITSVPFNTCYTAG
IAKLEEGDRVELLIPRQSANISLDGDCTFLGAVKLN
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggatcagtgctgctccggatcggatagaaagtcggaggatctcgtgggcagtc
gtggtcatgattttggtggccatcacttcatcttccttgtcagctctgtccctgtaccat
gtgctggctctgcaggctgaggtggaagggctgaggagcgaggtgacccggaggagagat
gaatgcagggacacgccggaggaaaatgttaaaggacctcagcagcaacatgaggaccac
agaagcaaaggccagatcttgccggagagcagcagtgaagctcctcagaaactggacaca
gaagcttctgggaggcaacaggagcagttcagtttgaaaaagagaagcgtggaattattt
cagccatgcttgcagatgattggagacaaaaagaggaaagtcttccagaaagattttgaa
ctacagcagcacactggcattccgtggcagatgggtctaatgcggggatcagctctcgag
cagtatgaggattccatagtggtcaaagaggaaggctactacttcatctacagtcaggta
gagcattatgacccaccagtcacaaaggtctattacaaagatcccacctatgcgatgggc
cacattgtgatccgtatcaaaaagaacgtggtcggggatgagagccagcaagttgttctg
ttccgttgcatcaaaagcatgattacgagtgttccctttaacacttgctacacagccggt
atagcaaagctggaggaaggcgaccgtgtggagctgctcatacctcgtcaatcagctaac
atatctttggatggagactgtaccttcctaggggctgttaaactgaactga
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