Trichomycterus rosablanca: 134324397
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Entry
134324397 CDS
T09921
Symbol
rint1
Name
(RefSeq) RAD50-interacting protein 1
KO
K20474
RAD50-interacting protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134324397 (rint1)
Membrane trafficking [BR:
trn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
134324397 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Rab5-bind
Motif
Other DBs
NCBI-GeneID:
134324397
NCBI-ProteinID:
XP_062862306
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All DBs
Position
1:complement(71585091..71599487)
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AA seq
746 aa
AA seq
DB search
MDYVAELVEREIGGDVKSLKKVHTLLEKLTAENKVLEKQVVTVSSSVPLRVSAALATAEE
SRAKLETLHQRERLLSNTLQQHLQGAQTWADSLGRTLGELDILERHMKYLQCLSRIEELS
DNIQQFLMTNCIWEAIGAVGHMTTLDKGLQESGCAHLQAFLRETLHFWHKILKDKLASDF
EEVLTQLHWPIVSPPTQSLSQPANAQELNSQLELLVSQLISLQTSDDLISENKEVPTHTG
LPQTPPLSLPVQIMLQPLSKRFRYHFTGNRQTNSLSKPEWFLTQVLMWMGHNSTFMEEKI
QPILDRAGANVNAKVELCRGLLTLAQEKLTHDAPRLLYDDGLFCHLVDEVLQFEKELRST
HAYPSDHPGALHILLEESVFQKWLSVERKMALEKMDAMLSVEGAWSSQYKDITDMDELKA
PDCAETFMTLLLVITDRYRSLPCPRAQLSFLALQRELVDDFRIRLTQVMKEESRQPLGSR
YCAILNAANYISTVLSDWSDNVFFLQLQQAAVSVGDEVLGPLGATETGRLASLEGSLFEE
LQALLERLRGDMLGRLLDAVMRDVKEKAQLYIRDRWISLPSQSDQATMSLSSSACPMLLC
LRNHLLQLQQLLCLPLFQMFWQGLAERLDLFLYQDVILYNHFNEGGAAQLQFDMSRNLFP
LFGHYCKRPENFFKHVKEACVILNLKVGPALLLSDVLKQDEPEEGEVSLRPEQPTPESAL
NELGVYKLSPADVQILLNLRSAWLNH
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggattatgtggctgaactggtggagagagagattggtggagatgttaaatctctaaag
aaagttcatacgctgctggaaaaactcacagcagagaataaagtgttagagaagcaggtg
gtgaccgtatccagctcagtacctttgcgtgtatcagctgctcttgctactgcggaggaa
tcccgggccaaactggagacattacatcagagagaaagactcctctcgaacaccctgcag
caacatctccagggtgcacagacctgggcagacagcctcgggagaactctgggagagctg
gacatactggagagacacatgaagtaccttcagtgtttgtctcggattgaggagctcagt
gacaacattcagcagtttctgatgactaactgtatatgggaggcgatcggtgcagtaggc
cacatgacgactctggacaagggtcttcaagagtcaggctgtgcccacctgcaagccttc
cttagagagacgctgcacttctggcacaagatcctaaaagacaagcttgctagtgatttt
gaggaggtgctgactcagctgcactggcccatagtttctcccccgacacagtctctctcc
caaccagctaacgctcaggaacttaacagccagctggaactgctggtctcacagctcatc
tccctgcagacctctgatgacctcatatctgagaacaaagaggtgcccacacacaccggc
ctgcctcagactcctccactctcacttcctgttcagatcatgctgcagcccctcagtaag
aggttcaggtaccactttactgggaaccggcagaccaactcactaagtaagccagagtgg
tttctaacccaggtcctcatgtggatgggacataattcgaccttcatggaggagaagatt
cagcccattctcgatcgtgctggggctaatgtcaatgccaaggtggagctttgcagaggt
cttctcacactggcccaggaaaagcttacccatgatgcccctcggctgctttacgatgac
ggactcttctgccacctggtggatgaggtgctgcagtttgagaaggagctgcgcagtaca
catgcttaccctagcgaccaccccggagcactgcacatcctgctggaggagagcgtcttc
cagaagtggctgagtgtagaaaggaaaatggcactggagaagatggatgccatgctgtct
gtagagggagcctggagctctcagtacaaagacatcactgatatggatgaactgaaagca
ccagactgtgctgagacttttatgacgttactgctggtcatcacagatcggtaccgttct
ttgccttgtcctcgagctcagctcagcttcctggctctacagagagaactggtggatgat
ttccgtatccgcctcacccaagtgatgaaggaagaatcccgacagcctttgggttcccgc
tactgtgccatcctgaatgctgccaactacatatccaccgttctaagcgactggagtgac
aatgtgtttttcctgcagttgcaacaggccgctgtgtcagtgggtgatgaagtgctgggg
cccctgggtgccacagagactgggcgactggcctctcttgagggctccctgtttgaggag
ctgcaggctttgctcgagagactaagaggtgacatgctgggccgcctgctggatgcagtt
atgagagatgtgaaggagaaagcacaactgtatattagagacaggtggatctcattgcca
tcgcagagtgaccaggccaccatgtctctgtccagctctgcatgtcccatgctgctgtgc
ctgagaaatcatctgcttcaactgcagcagctactctgcctgcctctcttccagatgttc
tggcaaggcctggcagagagacttgatctcttcctctatcaagacgtaattctgtataat
cactttaatgagggtggtgctgcacagcttcagtttgacatgtccagaaatctctttccc
ttgttcggacactactgcaagagacccgagaacttcttcaaacacgtaaaggaagcctgc
gtcattttgaatctgaaggtcggcccagctttattgctgagcgatgtgctgaagcaggat
gaaccagaggagggagaggtgtctctcagaccagagcagcccacacctgagtcagctctg
aatgaactgggggtttataaactgtccccggctgatgtgcagatcctcctgaacctgcgt
tctgcctggcttaaccactga
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integrated database retrieval system
