Trichomycterus rosablanca: 134324427
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Entry
134324427 CDS
T09921
Symbol
obsl1b
Name
(RefSeq) obscurin-like protein 1 isoform X1
KO
K19574
obscurin-like protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134324427 (obsl1b)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
134324427 (obsl1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_MYOM1
VEGFR1-3_N_Ig-like
Ig_5
Ig_4
C2-set_2
BiPBP_C
C2-set_3
fn3
Motif
Other DBs
NCBI-GeneID:
134324427
NCBI-ProteinID:
XP_062862338
LinkDB
All DBs
Position
12:complement(452614..498247)
Genome browser
AA seq
3223 aa
AA seq
DB search
MDVFGGAPRFLAYPRPVVVQSGTDAVLKCQIGGDPRPAVIWERNNEKIQQGGRYRVFEDG
NVYNLIIAAVTLEDSGQYICKAKNCIGETYAAATLKVEGEAQEMELREENRPRFLIKPLS
TRVGRGEDAVFSCKLWGKPRPEVVWEKDGKKLNEIFESTHFSVGYQDGGWFQLKIFKTRA
PDGGVYTCKARNEFGESLAGAVLLVDAGPGHEDEGGRNGYTNGHWKSHQAKQRSSKQVAT
RLKDYPLPNSVKVKMFAVTEGKHAKFRCYVTGKPKPEIIWRKDGKIILSGRRYLLYEDRE
GYFTLKVLYCKQQDNGVYVCAASNTAGQTLSAVHLFVKEPPVRFKQPLIDLEVWERDLAI
LECEVPEDSVPITWYLEDRRLQPGAKYGMEEWGTKRRLTIRDMGVDDDGIYLCEMPDGGR
SIAEVTVKGTIVRKLPRKVDVLEGENAAFCVEVEEEEMDIHWYKDGTELRETHQTILKSF
GRTHILVFVNTTPQDSGMVTFYVGRSKTSSQLRVKAVRHCPPSSPVGVQINTERANAALL
SWVPAQDCRKNPPSGYILERQEMGSQEWLQCLTTDSATSVEILGDSVPCEADYRFRICSV
NKYGRSGYVEFPRAVHLVPVAKIQTALQDALVPEGQDACFTIELSASVIGTWFWNGNQIQ
DDDRFSIRRSRTHQSLRIRGVRDSDNGAEITFIAYGIRDSAALYIQAPLVKFTPLSEMDR
NKFAEVGNPIVLYCELSDPEAPVRWYKNGVELHSAEGLHIQSEGTMRRIVIQSADFSHSG
VYSCDAIDDVIRFNVEVEAPPVRFTELPVAERNKSIEAGNPIVLQCELSDPTAQVFWYKD
GAKLLPQSGLSFQSDAAKRELEVQKAEFYHSGVYSCRTKGAAVQFNVEIKAPPIRFSALP
EFERRKSVEAGGVVVLRCEVSDPSAEVGWSKDGEEFLVQSGVDLVSEGCVRKLIIQRADA
SHAGVFRCTTDDDVLEYHVEVKAAQVRFSAVPEDDRNKSVEAGSSFQLRCEVSDPTAGVR
WYAGNAEIRPDTGWDMRAEGMLRMLVVRTSDPSHSGLYSCKTPDDSVHFSVDIKAPSARF
STLPEVVEKVLVDHPDHSTDPRREISEPPAEACWYEDGVDLLSKNLDHIKKESKRKLAVQ
AAQASESGWYDSLRKDDPLIRFNVGQKAPPSQAPDVPEPKRRKFTGGSEHVSSTERNNLS
DLLHDAADEKKTLHPPLTEPEPLMKSEVSIRSLIIKSSDKRDDANRPRTPDDHIQVNVDK
AGQSPSEAYRGERCDDQCALDMKAAKANVSACQGGQPTPAEADYPREPDEASCPKDPSEI
SERTLQTRGRQEPPLVGRRDRNVTSDALKKQTAQLPKTPPNEARAAETKDRSVTYQERVK
APSPKPVTFTPLPESARTKSIGRGMPLVLQCEVSDPYAPVRWFKDGIELRTENGLVIQSE
DCIRRLVVPTAEVCHTGAYDCEAMDDHVKFKVHVKAAQRTSPSPTLPETQRNQIPSNETD
ETGVPQSRLIPTDQLGRYARPEEVKAEERIKNSPSVGQSEDAVRTHDEKSDEPSDTGAYA
CQTEDTDTDKNTDMNADAPISVEPSAEPVTFLPVTEAQRKRTCVPGEPFDLECQVSDTAG
RVRWYKDGRELTSEAGVLITSGDTIRKLSVSSSELSHSGEYSCTSGEDEVTFNVEIKAPS
LSFKPLTEVETSRAADVGPPIVVSCETPDSETHVCPYKDGIEVSVQSGENIQTATENENS
EPLCVESGELCDTGLYVCGSAGDTGSVRLDHQDVSVAPSVRFSTLPEVARNKFIEAGCPV
VLQCEISDPVAMVLWFKDGAPLLKQTGLEFQSDGALRALIIRSAEPRHSGVYRCEAGDDH
MEFKVDVAAPPVTFVYIPEDELHRNIVEHENLLLSCEVSRCDAVAQWYKDGVELAAGEKV
TVEAKDTLRSLTVQSVQISDAGTYTCRAGDSALIFKVNVREPPVMIIYPKEDVHLDRHVP
EEIVLSCELSRPNGKVTWFKDGQKLQESENMGFKTEGPYRRLKIFHSRVEDSGEYVCDTA
DDSKFFHLSITEPPVRIVSPSQSQMELCQQTSERMVLSCEISRPNATVRWYRDGLEVEEN
PNLILEVDGVYRRLIIPETTVDDSAEYVCDTADDSVTFFVNIAEPPVRFIRPRKMACKVE
KFVGDAVLLDCEVSRPNAEVSWKKNGEDMEESANVTITEDGCTRQLTIHSSTLEDSGQYV
CDAKDDVMDFSVKILDPPVTFLHKDETVTERNFVVSDAVVLKCELSRANGVVRWYKDDER
IMGNDHFIFEEEGAFRSLIILNAEMRDAGKYTCDANDDEIIFNVTVEEAPVSILGNSGNA
EHYSLVAGEQLILECEVSQDSGVVQWLCNGRVLHPDSRTHIESKGTTRRLVLSNLQVSDS
GEYICDAFDDKMTIMVTVQEPPFRFIKKEETNVTACEEDSVTLHAVVNRSNAPVQWLRNG
EPIRYHRFSATSDGCDHYLTANPLQRSDAGQYTCDVGTDKINFRINVKAMKVKFSKPLEN
LVGLKGSDVVLRCELYTPKGDVQWLKNNREITPNQHFRIRADGRERSLQILGVRDEDAGE
YACESKDERTSASLVIKTPRIVEFIAELHNITVMEGEDTTFKCVVSPEDVELVWCMNGRP
VTPNERFSISSNGLCHTLHIKNCQVSDGGKLTAETEGVASRANLQVQETQVVFTKKMESV
VAEEFGEATLEVEVSLECGEVQWMRQGVVIHPGPKFTLKQSGRKRSLRIHRLALSDRGTY
SCETLHDRSQAQLGVEPRKVKIRKGLSEIQTFERETASFEVELSHSNVDGVWQKDGKPLK
NNNHCRMTAKGRVHSLTICNLSLENMGTYTFSAENAKTSARLTIKETPVSILKKLEHSMF
PEGSGATLECEISRYNVNVKWTKNGAELKPGKNLRIYSMGRKCFLQIVRCELGDSGVYTC
DAGDANTSCTVEVYERELEVLQNLEDLDIQEDQNAVFMCEVSLDDVPGEWFKNREGIKPT
STVKIRQEGAKHFLLMCNVKAEDAGEIKFVARNVESTAYLTVEKLPNNIVKPLQDTTALE
MSRVVLDCTVSNPRCSIRWYQGASVILPSERFEICSEGCHRKLVIQQVALADEGTYSVQV
EKNTSSAKLTVEAQTVEVLQELQDVEVTAPDEARFTCEVSVPVSKSPVWTLNDEALKPGP
GVVMERTGDVHRLTLKHTSQDMSGSVGFVLGTAKSIANLHVKK
NT seq
9672 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtttggcggagcaccccggtttctggcctacccgcgccccgtggtggtgcag
agcggcacggacgccgtcctaaaatgccagatcggcggcgaccccagacccgccgtgatc
tgggagagaaacaacgagaagatccagcagggtggcaggtatcgggtgttcgaggatggg
aacgtttacaatctcatcatcgcggcggtgacgttagaggacagcgggcagtacatctgc
aaagctaagaactgcatcggggagacgtacgccgccgccacgctgaaggtggagggtgaa
gctcaggaaatggagctgagggaggagaacaggccgcggtttctcatcaaacctctgtcc
accagagtgggccggggggaggacgccgtgttctcctgtaagctgtgggggaagccgagg
ccggaggtggtctgggagaaggacggtaagaagctgaacgagatcttcgagagcacacac
ttcagtgtcggatatcaggatggaggatggttccagctgaagatctttaaaaccagggcg
cccgatggtggagtgtacacgtgcaaggccaggaacgagttcggtgagagtttggccgga
gccgtgctgctggtggacgcgggtcctggacacgaggacgaggggggcaggaacggttac
accaacggtcactggaaatcccaccaggccaagcagaggagcagcaagcaggtggcgacc
aggctgaaggactacccgcttccaaactccgtcaaggtgaaaatgttcgccgtgacggag
gggaaacacgcaaagttccgctgttacgtgacggggaaacccaaaccagagatcatctgg
aggaaggacggtaagatcatcctgtcggggaggagatacctgctgtacgaggaccgtgag
ggatacttcactctgaaggttctgtactgtaaacagcaggataacggagtttacgtatgt
gcagcgtccaacacggcaggacagacgctgagcgccgtgcatctcttcgttaaagaaccg
cccgtgagatttaagcagccactcattgacctggaggtctgggagcgggacctggccatc
ctggaatgcgaagtgcccgaggactcggtgcccattacgtggtatctagaggaccggagg
ctacagccgggggccaaatacgggatggaggagtgggggacgaagcgcaggctcacgatt
cgagacatgggagtggatgacgatgggatctacctgtgcgagatgccagacggagggcgg
agcattgctgaggtaactgtcaaaggtaccatagtgaggaagctgcccaggaaggtggac
gttctggagggtgagaatgcagcgttttgtgtggaggtagaggaggaggagatggacatt
cactggtacaaagatggaacagagctcagagagactcatcagaccatcctcaaatccttt
ggcaggactcatattctagtttttgttaatacgacaccccaggattctggcatggtcacc
ttttacgtgggaagatcaaagacgtcgtctcaactaagagtcaaagcggtcagacactgc
ccacctagctctcccgtgggggttcagatcaacacggagcgagcgaacgcagccctcctg
tcctgggttccagcgcaggactgccgaaagaacccaccctcgggttacatcctagagaga
caggaaatgggctctcaggagtggctgcagtgcctgaccacagactcggccacgtccgtg
gagatcctgggcgacagcgtgccgtgcgaggccgactacaggttccgaatctgcagcgtc
aacaagtacgggaggagcggatacgtggagttcccgcgagcagttcatctggtaccagtg
gccaaaatacaaactgctctacaggacgctctggtgccggagggtcaggacgcctgtttt
accatcgagctgtccgcctcggtcataggcacctggttttggaacggcaaccagattcag
gatgacgatcgcttctcgataagacgctcacgtacacaccaatcgctccggatccgaggg
gttcgagacagcgacaacggagcagagatcacattcatcgcttatggaatacgcgactct
gctgctctgtatatacaagcaccgttagttaaattcactccactgtccgagatggaccga
aacaagtttgccgaagtcggcaaccccatcgttctgtactgcgagctgtcggatccggag
gctcccgtccgctggtataagaacggcgtagagctgcactcggcggagggtcttcacatc
caatcagaaggaaccatgaggaggatcgtcatccaatcggctgatttttcgcattcgggc
gtttacagctgcgacgccatcgatgacgttatcaggtttaacgtggaggtcgaagctccg
ccggtgaggttcacagaacttccagtggctgagaggaacaagtcaatcgaagccggaaat
cccatcgtactgcagtgtgagctctccgatcccaccgcccaagtcttctggtacaaagac
ggagccaaacttctaccacagagcggactgagctttcaatccgacgccgcaaagagggaa
ctcgaggtccagaaggctgagttttaccattctggggtgtacagctgcaggacgaagggc
gccgccgtgcagttcaacgtggaaattaaagctccacctataaggttctcagctctcccg
gaattcgagaggagaaagagcgtggaggcgggcggcgtggtcgtcctgcggtgcgaggta
tcggacccctcggcagaggtcggctggtcaaaggacggggaggaatttctcgttcagtct
ggagtagacctcgtgtctgagggctgcgttcggaaattaatcatccagagagccgacgcg
tcgcacgccggggtgtttaggtgcacgaccgacgacgacgttctggagtaccacgtggag
gtcaaagctgcacaagtgcgcttctcagccgtccccgaagacgaccggaacaaaagcgtg
gaggctggcagcagttttcagctccgctgcgaggtgtcggatccgaccgccggcgtgcgc
tggtacgcgggcaacgcggagatccgaccggataccggctgggatatgagagcggaggga
atgctcaggatgctggtagtccggacttccgatcccagtcactctggactgtacagctgc
aagacgcccgacgactcggtgcacttcagcgtggatattaaagctccgtcagcgaggttc
tcaaccttgccagaggttgtggagaaagtgctggttgaccacccggaccactcgaccgac
ccacgccgtgaaatctcagagccgccggccgaggcgtgttggtacgaggacggagtagat
ctcctctctaaaaatctagatcatattaaaaaggaaagcaagaggaagctcgctgtccaa
gcggcgcaagcctccgagtccggatggtacgactctttgagaaaggatgatccactcatc
cggtttaatgttggacagaaagcgccgccttcacaagctccggacgtccccgaacctaag
aggagaaagtttaccgggggaagcgaacacgtctcgagtaccgaacggaataacctctcg
gacttgctgcatgatgctgcagatgagaaaaagacgttacatccacccctcactgagccc
gaacctttaatgaagtcagaagtgtccatcaggagtttaatcatcaagtcatccgataaa
cgagacgacgccaacagacctcggacccccgacgatcacatccaggttaacgtggataaa
gccggacagtctccctctgaagcgtacaggggggagcgctgtgatgaccagtgcgctttg
gatatgaaagctgcaaaggcgaatgtctcagcgtgccagggagggcagccgacgcccgcc
gaagcggattacccccgggagcccgatgaagcatcctgccccaaagatccgagcgagatc
tctgaacgtacgctccaaacccgtgggcgtcaggaaccgcccctagtcgggcgacgtgac
agaaacgtgacgtccgacgccctaaaaaaacaaaccgcccaattgccaaagacgccgccc
aacgaggcgcgggcggccgagactaaggatcgatcggtgacctatcaggagcgagtaaaa
gcaccttcacctaaacctgtaacattcacaccactacccgagagcgccaggaccaagagc
atcgggcgcggcatgccgctcgtactccagtgtgaggtctcagacccgtacgctccggta
cgttggtttaaggatggaattgagctcagaactgaaaacgggttagtgatccagtctgag
gattgtatacggaggctggtcgtacccacggcggaagtctgtcacaccggagcgtacgac
tgcgaggcaatggatgaccatgtaaaatttaaggtgcatgtcaaagctgcacagaggacg
agtccaagtccgacgctcccagagactcagaggaatcaaattccttcaaacgaaacggac
gagaccggcgttccacagagccggctgatccctacagatcagctcggccgctacgcacga
ccagaagaagtaaaagcagaagaacgaattaaaaacagtccgagcgtcggccaatccgag
gatgctgtcagaactcatgatgagaaatcagacgagccgtccgatactggagcgtacgct
tgtcagacggaggacacggacacggacaagaacacggacatgaacgcagacgccccgata
tctgtggaaccatcagccgaacccgtgaccttcctgcccgtcacagaagctcagagaaag
cgaacctgcgtacctggggaacccttcgacctggaatgccaggtctcggacaccgccggg
cgcgtccgctggtacaaagacgggcgagagttaacgtctgaggccggagttttgattacg
tccggagatacaatccgaaaactgtctgtgagctcgtcggaattgtctcacagcggggag
tatagctgcacgagcggcgaggacgaagttacgttcaacgtggagattaaagctccatca
ctaagtttcaaaccccttacagaggtggagacgagcagggccgctgatgtaggtccaccc
attgttgttagctgtgagacgccagactctgagactcacgtttgcccgtataaagatggc
atcgaggtctctgtgcaaagtggagaaaacatccaaacagccacagagaatgaaaattcc
gagccattatgtgtagaatcaggagagctttgtgacactggactgtacgtctgtggaagc
gctggtgatactggctcagtcagactggaccatcaagacgtctccgtagctccgagcgtg
aggttctccacccttccagaagtcgccagaaacaagtttatcgaagccggatgtcccgtg
gtacttcagtgtgagatctccgatcccgttgccatggtcctctggttcaaagacggagcg
ccgctcctgaaacagaccggcctcgagttccagtccgacggcgctctgagggcgctgatc
atccggtcggccgagcccagacactcgggagtgtatcgctgtgaggccggcgacgatcac
atggaattcaaggtggacgtcgcagctcctcccgtgacattcgtttacatcccagaagat
gaactccacaggaatatcgtggaacatgagaatcttctcctgagctgcgaggtgtccaga
tgtgacgccgtcgctcagtggtacaaggacggtgtcgagctggcagccggtgagaaagtg
acggtggaggctaaagacaccctccgcagcctgaccgtccagtccgtccagatctcagac
gctgggacgtatacgtgccgcgcaggggacagcgcattgatatttaaggttaacgtacga
gagcctccggtaatgatcatctatccgaaggaggacgtccacctcgaccggcacgttcct
gaggagatcgtcctgagctgtgaactctcacgtccgaatggaaaagtcacctggtttaag
gacggacagaaactccaagaaagtgaaaatatggggtttaaaactgaaggtccttacaga
aggttaaagatcttccacagcagggtggaggactcgggcgagtacgtctgcgacacggcc
gacgactcaaaattctttcatctgagcataacggaacctccggtgcgcatcgtttccccc
agtcagtcccagatggaactgtgccagcagacgtcggagaggatggtgctgagctgtgag
atctccagacccaacgccaccgtgcgctggtaccgggacggactcgaggtggaggagaac
cccaacctcatcctggaggtcgacggcgtttacaggagactcatcataccggagacgacc
gttgacgattctgcagaatacgtctgtgataccgccgatgactccgtaacgttcttcgtc
aacatcgcagagccgccggtgcgattcatccggccgaggaagatggcctgcaaagtagaa
aagtttgtaggagacgcggtgctgcttgactgtgaggtttcccgaccgaacgcagaggtg
agctggaagaagaacggcgaggacatggaggagagcgccaacgtgaccataaccgaggat
ggctgcacccgacagttaaccattcactcgtccacgctggaagactcgggtcagtacgtc
tgcgatgccaaggacgacgtgatggacttcagtgtgaagatactggatcctccagtaacg
ttcctacataaagatgaaacggtaacagagcggaactttgtggtgtcggacgccgtcgtg
ctgaagtgtgagctctcccgagccaacggtgtcgtccgctggtataaagacgacgagaga
attatgggtaacgatcacttcatcttcgaggaagaaggagcgtttagatccctgatcatc
ctcaacgctgagatgagggacgctgggaagtacacgtgtgatgcaaacgatgacgagatc
atcttcaacgtgacagtggaagaggcgccggtgtccatcctaggaaactcggggaacgcg
gaacactactcgctggtcgcaggggaacagctgatcctggagtgtgaggtgtctcaggac
agcggcgtggttcagtggctctgtaacggacgggtcctgcacccggactcacgaacccac
atcgagagtaaaggtacgaccagaagactcgttctctcaaaccttcaggtgtcagactca
ggggagtatatctgcgacgccttcgatgacaagatgaccatcatggtgacggtacaagaa
cctccgttcaggttcattaagaaggaggagacgaacgttacagcctgtgaggaggacagc
gtcactctgcatgccgtggtgaacaggagtaacgccccggtgcagtggctcagaaacggt
gaaccaatcagataccatcgttttagcgccacaagtgacgggtgtgatcattacctcacc
gcaaaccctctccaaagatccgacgccgggcagtatacgtgtgacgtgggcacggacaaa
atcaacttcaggatcaacgtcaaggccatgaaggtgaaattctctaagccgctggagaac
ctggtggggctgaaaggcagcgacgtcgtcctgaggtgcgagctatacacgcccaaagga
gacgtccagtggctgaagaacaaccgagaaatcacccccaaccaacacttcaggatccgg
gcggacgggcgagagaggagcctgcagatactcggggtgagggatgaggacgcgggggaa
tacgcctgcgagtctaaagacgagagaacgtctgcaagcttagtcattaagactcctcgc
attgtggagtttattgccgagctgcacaacatcaccgtcatggaaggagaagacaccacg
tttaagtgtgtggtttctccagaagatgtcgagctggtgtggtgcatgaacggacgccca
gttacaccgaacgagaggtttagcatctccagtaacggactgtgtcacacgctgcacatc
aaaaactgtcaagtatcagacggcggcaaactcacggccgagaccgagggcgtggcgtcc
agagctaatctacaggttcaagagacgcaggtcgtgttcaccaagaaaatggagtcggtg
gtggcggaggagtttggggaggcgaccctggaggtggaggtgagcctggagtgtggggag
gtacagtggatgaggcagggcgtggtcatacacccgggcccgaagttcaccctgaagcag
agcggccgaaagcgttctctgaggatccacagactcgccctgtccgaccgcgggacctac
agctgcgagacgctccacgaccggtcgcaggcccagctgggcgtggaaccacggaaggtg
aagatacgaaaaggtctgagcgagatccaaaccttcgagcgtgaaaccgcctccttcgag
gtggaactctctcacagtaacgtggacggcgtgtggcagaaggacggaaaacctctgaag
aacaacaatcactgccgcatgacggctaaaggtcgcgtgcacagcctgaccatatgcaac
ctgtcgctggagaacatgggcacctacacgttcagcgccgaaaacgcaaagacgtcggcc
agactcaccatcaaagagacacccgtgtccatcctgaagaaactggagcacagcatgttc
cccgagggttcaggagccaccctggagtgtgagatctccagatacaacgtcaatgtgaaa
tggaccaagaacggagcagaactgaagcctggtaagaaccttcgtatctactccatgggg
aggaagtgcttcctgcagattgtgaggtgtgagctgggagattcgggcgtgtacacgtgt
gatgctggagacgcaaacacgtcctgcaccgtggaggtttacgagcgagagctggaggtg
ctgcagaacctggaagacttggatattcaggaggaccagaacgccgtgttcatgtgtgag
gtgtctctggatgacgtaccgggagagtggttcaagaacagagagggaatcaaacccacg
agcaccgtcaagatccggcaggaaggagccaagcacttcctccttatgtgcaacgttaag
gcggaggacgcaggagagatcaagtttgtcgccagaaatgttgagtctacagcttacctt
acagtggagaagctcccgaacaacatcgtgaagcccctgcaggacaccacagccctggag
atgagccgagtggtgctggactgcacggtgtcgaacccgcgctgcagcatccgctggtac
cagggcgccagcgtcatcctgccctccgagcgcttcgagatctgcagcgagggctgccac
cgcaaactggtcattcagcaggtggcgctggctgacgagggcacgtacagcgtgcaggtg
gagaagaacacgtcctcggccaagctcaccgtggaagcccagacggtggaggtgctgcag
gagctgcaggacgtggaggtcacggccccggacgaggctcggtttacctgtgaggtgtct
gtacccgtctctaaatcacccgtatggactctgaacgacgaggcgctgaaacccggacca
ggggtcgtcatggagagaacgggggacgtacacaggcttactctcaaacacacgtcccag
gacatgagcggcagcgtggggttcgttttaggaacggccaagagcatcgccaacctgcac
gtcaagaaatga
DBGET
integrated database retrieval system
