Trichomycterus rosablanca: 134324429
Help
Entry
134324429 CDS
T09921
Symbol
tspearb
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134324429 (tspearb)
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134324429 (tspearb)
Cilium and associated proteins [BR:
trn03037
]
Other cilia and associated proteins
Stereociliary proteins
134324429 (tspearb)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
134324429 (tspearb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
134324429
NCBI-ProteinID:
XP_062862344
LinkDB
All DBs
Position
12:211216..226796
Genome browser
AA seq
672 aa
AA seq
DB search
MKAALMLQTSVILLCFITSSWSGPWRPCTDLLPLDLLHRVVPGDAADQSRIRMVQSQGSR
GLKFSGPPQALSFPSSQIFTNCNFFPAEFSIVVTIKIPKLISNKDEYIFTLLDEDTDELL
VGLRLRHDKLHFLYQLDGRMRRETFRQVNVADGRWHTMVLALSGRYAVLTVDCSIPVELQ
LEETFPEDLDVEGSRFLVGSRRRWSGLFSGLMRQLVLVPGSDASSRVCPSSDPKLSILSV
PQILLHLPITSPANQLPLYPYEAELRVTQRGAPPLCVRATVGQLWFNTDERALFLCNGTN
WITMMHEQEKLDYVEDHQNLFTNSETFDIEVFQLPSLGLFIATANRDSGSGSSIYRWTDG
RFQRYQNIDTYDAQAWKFFTVDKKRFLVVANSRRSSASECEFSVIYKWSSRKQNFVVYQK
INTYSARDWEAFRIHDDDFLAVANHRQGEMNHNIESVIYRWNRHTRMFEVNQTISTSGAY
DWEFFTIGPYHFLVVANTFNGKSTAISSSIYIWLEGKFQLFQDIMTYGAIDWEMFQIGNR
FFLAVANSQKFSETGSVLYSINSTIYELNNTTQTFVKFQDIITSSALDWEFFTVGDDKFL
VVANSYDGASYSINSVIYRWQGYEGFVPVHRLNTHGCKDWEFFTSSDGSYLISSSARAPY
SKVLKLKTYYQR
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagccctgatgctgcagacgtcggtcattcttctctgcttcatcaccagcagc
tggtcagggccgtggagaccatgcacagatctgctcccgctggaccttctgcaccgcgtc
gtccccggtgacgctgctgatcagagtcggatcaggatggttcagtctcagggttccaga
ggactgaagttttctggacctccacaagctctgagcttcccatcgtcacagatcttcacc
aactgcaacttcttccctgctgagttctccatcgtggtcaccatcaagatccccaaactt
atttctaataaggacgagtacatctttactctcctggatgaagatacagacgagctgctg
gtcggtctccgtctccgtcatgataaacttcacttcctgtatcagttagatggacggatg
aggcgtgagaccttcaggcaggtgaacgttgctgatggacgatggcacacgatggttcta
gcgctcagtggccgttacgccgtcctgaccgtggactgcagcatcccagtagagctgcag
ttggaggaaacttttcctgaagatctggatgtagaaggttctcggttcttggttggcagc
aggaggagatggagtggactcttctctggtttgatgaggcagctcgtcctcgtaccagga
tcagacgcctcctctcgggtttgtccctcttcagaccccaaactctccatcttatcagtt
cctcagattctcctacacctgccaatcacatctccagccaatcagctcccactttacccc
tacgaggcggagctccgggtgacgcagcgcggggcccctccactgtgtgtgagggccacg
gtggggcagctgtggttcaacactgacgagagggcgctgttcctgtgtaacggtaccaac
tggatcaccatgatgcatgaacaggagaagctggattatgttgaagatcatcagaatctc
ttcacaaactcagagacgtttgatatcgaggttttccagctcccgtctctcggattattt
atcgccacagcgaaccgcgactccggttctggctccagtatttacagatggaccgacgga
aggttccagagataccagaacatcgacacgtacgacgcccaggcctggaaattcttcact
gtggataaaaagaggttcctggtggttgctaactccagacgtagcagtgctagtgagtgt
gagttctctgtgatctataaatggagctcgaggaagcagaactttgtcgtttatcagaag
ataaacacgtacagcgcccgggactgggaggccttccgtatccatgacgatgacttctta
gctgtagccaatcatagacaaggtgaaatgaaccacaacatcgagagcgtcatctacagg
tggaaccgccacaccaggatgtttgaggtgaatcagaccatctccacgtctggagcatac
gactgggagttcttcaccatcggaccgtaccattttctggtggtggccaacaccttcaac
ggcaaatccaccgccatcagctccagcatctacatctggctggaggggaagttccagctg
ttccaggacatcatgacgtatggagctatagactgggagatgttccagattggtaacagg
ttctttttggctgtagcaaactctcagaaattcagtgagacgggttcagttctctacagc
atcaactccaccatctacgagctgaacaacaccacacagaccttcgtcaagttccaggac
atcatcaccagcagtgcgttagattgggagtttttcacggtgggtgacgataaattcttg
gtggtggcgaactcgtacgatggagcttcttactcaataaacagtgttatatacaggtgg
cagggttatgaaggatttgttcctgtgcacagattaaacacacacggatgcaaagactgg
gaattcttcacttcctctgacggctcttacctcatttcctccagcgccagagctccctac
tccaaagtgctcaagctaaagacgtactaccagcgttaa
DBGET
integrated database retrieval system
