Trichomycterus rosablanca: 134324574
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Entry
134324574 CDS
T09921
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134324574 (utp20)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134324574 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
134324574
NCBI-ProteinID:
XP_062862543
LinkDB
All DBs
Position
1:complement(74416634..74474684)
Genome browser
AA seq
2805 aa
AA seq
DB search
MKLKVKPLSHKSENTFRFLTFSERLANVNIDVIHRIDRTGSYAEEVDTYFYEGLTKWRDL
NLTDHFTAFLREVSNKCQSFHMLVFHQNAIVECLKTHLSVKSSLASQPLLDLVVQLARDL
QTDFYPHFTDFFIIITSVLETQDTEVLEWAFTCLSYLYKYLWRLMVKDMDKIYSLYSKLL
AHKKEHIRNFAAESFSFLMRKVPDFDSLFTMMFEDLDQHPQKSEGVGQLIFEMCKGVCNM
FHSCANTALPVVLRKLGPAKDGDVALTYDAVKEALDHMAESSASYVEKEHLLVLWDSLQA
CIKDVLLRLKGGSPDQASEHLERILFIYHTLVEHRKGAKITKPQCVCEMLLQLVQTPGLS
YSCCGLLLQVVSSFLLGEITSLPATVIQDLVKKVFISGMDRDLILSFAKEMFNMKQFEQL
FLPSLLQFVEQLFFSEDSVSRLLALELLVRLILVKAQPPNDGSMAFEKYPLVFTGQSVGL
NAVEKAQSVPVPQQIFTFIDVLDEQPLSDLSQIWAALVILPHLRPLEATRVIPSVTAVLN
RLLHEVLSEKLGKGGLFVARQALTTLLSFKETALVLSLLPNELVRHVIETFPTDLSALLL
ADLYYTRLSLSGCSDQLSHNSLMDLYQVLHVNLSSNISKIRLLTLRILSHFEAELPKPAE
GEESSSLQTVFAICLQAEQVPATVQDYREKLLHLRKLRHDLVQPCLPHGSFQQVPLRYLI
AMLFVNFRPLWDAVIDLLVSHARDMDNKEFWKVYYEHLEMIAGLAEKELQTDDGEEECDQ
DRSAGQIRGPGTDVIASGDVGILFLEQLDEVGSVSDRTDFTNFRGLLWRAMTKFPDRVEP
RSRELSPLLLRFIRTEFYPADLIVAPTQNLTKRSRLSSQSEADNEADGMKEDEEEQVEEE
TERKIPRRAAAKQLITHLKVFSKFTNPKALYLEPELHELYTQLLCHKDQQIQRAALDCLM
TYKDPNILPYKENLEKMLDDKHFKDEIVQFNISEEGSAVLAIHRSKLIPVLMRVLYGRMR
TKAGNKFQGKAAAASRSSIVLRFLAGCQSEELAMFIDLLLEPVCHYGQGTCLAAIEKAMA
DTDSSSVLPLGRQHGLLNVIEMILNKLGHLIDSYLPKLLQIILCATASVAWLLDCREQLK
PGCISPLKNLRRLGLLRIQDFFDKFESYQFTSDELDAVFHAVVWPQVCRLPSESTYAPTP
LLKLIHVWSKNARYFPLLAKQRPGHPEHDILLNVFALLSSKNVSTNTAAMVMDVCESLLN
TPDFVPSENETELNVSNCVIPEVASGSEIVEDSLSVGSRLLLPHIPAVLQYLSGAVLNSD
RIKKKRFRAQVSKELNILSKISRFVTDKEQSSTLISLLLPYLQKSKIAEETELDILGTVK
NLLKQCSEPTVFLRPLSRLFSIIQSKPCRKALCEVYQTLSDLNGELKYITDVAVQLNAFD
SRHLDEIHFDVRLTAFQKCIKHIKEMSTLDIRYLTAIMHNCFHSFEIGDMSLADSATLCL
SAIITQLAAVGTPEQEYKEIVQYIMLDAVRKGLKSKTESVRNDYTTILACLVKTFPSRPE
FRDLVQLTNYNDPESDFFEHMKHIQVHRRGRALRKLAKQLTEGTVVMSSRSMQNFIMPYA
MIALFDEKLLKHEAITSAAVEVIGAVCKCLTWSKYLYYLKHFIHVLQTGLAEQKLAVSLL
VTILEAFHFDHETLSKEIELAKNKKADGVSAVDAEVKDEVQAEAMDSDESDAEEAMETGD
ARADVDATESEAMDTGSSESAKPKEGPQVQVMKAPPVVSSGLPQSKEELEALITSIHQTV
TKSVLPRLHKCLTAKVKRDDEHKMVKSKEVRDEEVVRVPIAFAMVRLMQSLTQEVMEANL
PGVLIKVCVHLRSRFQEIRDVARNTLIKIIEALGHRYLQYLLTEMHGVLVKGYQIHVLTF
TVYHLLSILRPSLKAGDLDPCIDILVEIFNNELFGALAAEKEIKGIVSKVMEARHSKSSD
SYEFLAQFSSQERVTQLIIPLKEILESTASLKVSRRVHSVLRRIVAGLLLNESMTPQSIL
LLSHGLVSQSLPLITSKSRQKAAPPPDPRLPPPSCLLLPPTPKRGGMRPALSRTTNMHIL
VDTGLSLLHCSLRNSKINSSVASVREMLDPFVSLLLDCLDSMHVKVITEALQVFIWILKF
PLPAVEQNADQLTKQLFVLLKDYAKAGAGHGENFHLVQNCFKAITVLVKCVAKHRITDTQ
LQVLLGYAEEDIYDNTRQATAFGLLRAILSRKLVVPEMEDVMKKVAKLSINGSNEQVRVR
CRQIYLKYLMDYPLGKKLKSHFDFIVAQLTYEYNTGRQSTLEMLEFIFQSFPQPLLLEHC
GLFFVPLSLAVVNDDSARCKKMASLAIKTLLGKLDVKHKNSMFTLVNSWLTGEKMALRRL
GAQVCGLFVEVEGEHFNSRLDSLLPLIEQEIHTDNFGDIEEEENEKAADRLLFCYLTLII
KLIKDCGFLELHKPSDTLSSIWAHIEAHLRYPHSWVWLTASQIFGLLFAAQKPEELLSMW
CSEKNASKNERSTASLFLSANLDKKMRELVLSCSHQLQSKFLDISAGEQVIKNLLFVAKV
IYLISPKSETVENGKEEPSEEQTVEETEDTVEETEEDKLEDEQQQQAVEDKDENKPPSLL
WVIRKFSLLAKREAADTPKIPLKRTCVFKFLGAIAVDLGKERLGPYLTTIISPLYRELDS
TYADQDPTLKNLAQELIEMLKKLVGLQKFSLAFAAVQKEASQRRATRKKHKALQAVANPD
IAARKKIKKHQKKTTAKKRKIEFLKPGHKAKKQKRTSLRDLAMVQ
NT seq
8418 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaaagtaaaacctctctcccacaaatcagagaacaccttccggtttctgacg
ttttctgagagacttgctaatgtaaacattgatgtcattcaccggattgatcggactggc
agttacgctgaggaggtggacacttacttttatgaaggtttaacaaaatggagagactta
aatttgacagatcacttcactgcctttctgagagaggtgtcgaacaagtgtcagtccttt
cacatgttggtgttccaccaaaatgccatagtggagtgtctgaagactcatctgtctgtg
aagagcagccttgcctctcaacctttgttagatcttgtggtccagcttgcacgtgacctc
cagacagatttttaccctcactttactgacttcttcatcatcattacatcagtgcttgag
acccaggatactgaggtgctggagtgggctttcacttgcctctcctacctgtacaagtat
ttatggagactgatggtgaaagacatggacaagatatacagtctctacagtaaacttctg
gcgcataagaaagaacacattcgcaactttgctgctgagagcttctcttttctgatgaga
aaggtaccagattttgacagtttgtttacaatgatgtttgaggatctggatcagcaccct
cagaaatcagagggagtggggcagctcatctttgaaatgtgtaaaggggtctgcaacatg
ttccactcctgcgccaatactgctttgccagtggttttgaggaagctcggccctgctaaa
gatggtgatgttgctcttacttatgatgctgttaaagaggccctggatcacatggcagag
tcttcagccagttatgtggagaaggagcatcttcttgtactttgggattcattgcaggct
tgtataaaagatgtgctgctgagactgaaaggtgggtctccagatcaggccagtgagcac
ctggagcggatcttgttcatttaccacacactggtcgagcaccgaaaaggagcaaaaatt
accaagccacagtgtgtctgtgagatgctacttcagctggttcagactcctggactatcc
tactcctgctgtggtttgctcctccaagtcgtctcatcttttctgttgggagagatcaca
tctctaccagccactgtgattcaagatctggtgaaaaaggtcttcatcagtgggatggat
cgagatctcattctatcttttgccaaggagatgttcaatatgaagcagtttgagcagctg
ttcctgcccagtttgctgcagtttgtggagcagctgtttttcagtgaggactcagtgagc
agactgctggctctggagctgctggtcagactgatcctggttaaagcgcagcctcctaat
gatggatctatggctttcgaaaagtacccgctagtcttcaccggccagtctgtagggtta
aatgctgttgaaaaggcccagtcagtgccagtccctcagcagatcttcacatttatagat
gttctagatgagcaaccgctgtcagatctttctcagatctgggcggctctggtaattctg
cctcacctcaggcctttggaagcaactagggtgattccttctgtcaccgctgtgctgaac
agactactacatgaagtgctcagtgaaaaacttggcaaaggtggactgtttgtagcacga
caggctttaaccacactgctcagctttaaggaaacagcactggtgctttctctgctcccg
aatgaactcgtcagacacgtcatcgagacatttcccactgatctgtctgcactgctgctg
gctgatctgtactacaccagactgtccctcagtggctgctcggaccagctatcccataat
tccttaatggatctataccaagtgttgcatgtgaatttgtcctccaatatctccaagatt
cggcttctgacactgaggattttgtcccactttgaggcagaacttcctaaaccagcagag
ggtgaggagagctcgagtttgcagactgtgtttgctatctgcctgcaggctgagcaggtt
cctgctacagtgcaggattacagagagaaactgctgcacttgcgcaaactgcgccatgac
ctggtccaaccctgtcttcctcatggatccttccaacaggttccactgcggtatcttatt
gcaatgctgtttgttaatttcagacctttgtgggatgctgtcattgatctgcttgtgagc
catgccagagacatggacaacaaggaattctggaaggtttactatgaacatttggagatg
attgctggtctggcagagaaagagctgcagacggatgacggtgaagaggaatgtgatcag
gatagaagtgctggtcagattcgaggtccggggacggacgtgattgccagtggggatgtc
ggcattttgtttctggagcagctcgatgaggtgggcagtgtcagcgatcgcacagacttc
accaacttccgtggcctgctgtggagagccatgacaaagttcccagaccgagtggaacca
cggagccgagagcttagtccactgcttctgcgcttcatcaggactgagttttatccagct
gatctgatagtggctccgactcagaacttgacaaaaagaagccgtttatcatcacagtct
gaggctgataacgaggctgacggcatgaaggaggacgaggaggaacaggtggaggaggaa
actgagagaaaaataccaaggagagccgctgccaagcagctcatcacacatctgaaggtc
ttctccaaattcaccaaccccaaagctttatacctggaacctgaattacacgagctgtac
acacagctattgtgccacaaagaccagcaaatacaaagagcagctctggattgtctgatg
acctacaaggacccaaacatccttccttacaaagagaatctggagaaaatgttggacgac
aaacatttcaaagatgaaattgttcagtttaacatctctgaggaaggctcggcggtgctg
gccatacaccgctccaaactcatccctgtgctcatgagggtcctgtatggacgcatgcgc
actaaagctgggaataagttccagggtaaagctgcagccgcctcacgttcttccattgtg
cttcgcttcctggcaggatgccaatcagaggagctggccatgttcatcgacctgctgctg
gaaccagtgtgccattacggccaaggaacatgtctagctgcaatagagaaggccatggct
gacactgattcctcttccgtgctccctctgggacgtcagcatggtctgcttaatgtcatt
gaaatgattctgaacaaacttggtcatcttatagacagctacctgcccaaacttctgcag
atcatactgtgtgctactgcctctgtggcctggctgctggattgcagagaacagctaaag
cctggatgtattagtcctctgaaaaacctgagaagactggggcttctgcgcatccaggac
ttctttgataagtttgagtcataccagtttacgtcagacgaactggacgctgtgtttcat
gctgttgtctggcctcaggtttgccgtttgccctcggagagtacgtatgctcccactcct
cttcttaaactcatccatgtttggagcaagaatgcaagatatttccctttgctggctaag
cagagaccaggccaccctgagcatgacatcttacttaatgtctttgcattactgtcctca
aagaacgtatctaccaacacggcagccatggtaatggacgtctgtgagtctttactcaac
acgccggactttgtgccctctgaaaacgagacagagctaaacgtcagcaactgtgtgatt
cctgaagtagcctcaggttctgaaatcgtcgaagactctttgtctgtaggctcaaggctg
ctgttgcctcacattcctgcagtgcttcagtacctcagtggagctgtgctcaactctgat
cgtataaagaagaagagattccgagctcaagtcagcaaagagcttaacatcttgtccaag
atcagcagatttgtcacagacaaggaacagagctcaacacttatcagcctactactacca
tacctgcaaaagtcaaagattgcagaggaaacagagctggatattcttggcacagtgaag
aacctgttgaaacaatgttcagagcccacagttttcttgaggcctctcagtaggcttttc
tcgatcatacagagcaagccatgccgaaaagctctgtgtgaagtataccagactctatca
gacctgaacggagaactgaagtacataactgatgttgcagtgcagctgaatgcctttgac
agtcggcacctggacgagattcactttgacgtgcgattgacggctttccagaagtgcata
aaacacatcaaagagatgagcacgctggacattagatacctcacagctatcatgcacaac
tgcttccactcttttgaaataggggacatgtctttggcggacagtgccactctgtgtctc
tcagcgatcattacacagctggctgcagtgggcacccctgagcaggagtataaagagatc
gttcagtacatcatgctggatgcagtgaggaagggactgaagagcaaaactgagagtgtg
aggaacgactacacaacgattctggcctgtctggtaaaaaccttccccagccgacctgag
ttccgggacctggtacagctgaccaactacaatgatcctgagtcagacttcttcgagcac
atgaagcacattcaggttcaccgtagggggcgagctctaaggaaattagcaaagcagctg
acagaaggcacagtggtgatgtcgtcccgctccatgcagaatttcatcatgccatacgcc
atgattgctctgtttgatgagaaactgctgaagcatgaggctataacgtctgcagcagtt
gaagttattggagcagtgtgcaagtgcctcacctggtccaaatacctctactacctcaaa
cacttcattcatgtgctacagacgggactggctgaacagaaactagcagtgagtttgctg
gttactattttggaagcatttcactttgaccacgagactctaagcaaagaaatcgaacta
gccaaaaacaaaaaagctgacggtgtgagtgccgtggatgcagaagtgaaagatgaggtg
caggctgaagccatggactcggatgaaagtgatgccgaggaagccatggagaccggcgat
gctagagctgatgtggatgctacagagagtgaggccatggacacaggttcgagtgagtca
gccaagccgaaggaaggcccgcaggttcaggtgatgaaagcgccccctgttgtaagcagc
ggccttccacagagtaaagaggagctggaggctctcatcacgtctattcatcaaacagtc
acaaagagtgtcctgcccagactgcataaatgcctcacagccaaggttaaaagagatgat
gagcacaagatggtaaaatcgaaggaagtaagggatgaagaggtggtgagggtgcccatt
gcctttgcaatggttcgacttatgcagtctctgacacaggaagtcatggaggccaattta
cctggagtgctcataaaagtgtgtgtccacctgaggagccgttttcaggagatccgtgac
gttgctcgtaacaccctgatcaagatcatcgaggctttagggcatcgctacctgcagtat
ctcctcacagaaatgcatggcgtcctggtgaaaggctatcagatccatgtactgaccttc
accgtttaccatctgctctcaatcctgagaccatcattgaaagctggagatcttgatcct
tgtatagacattttagtagagatcttcaacaacgagctttttggggctcttgcagcggag
aaagagattaaaggcatagtttctaaagtgatggaggctcgtcacagcaagagctcagat
tcgtatgagtttttggcacagttttccagccaggaacgggtcactcagctgatcataccg
cttaaagagatcctggagagcacagccagtttaaaggtgtctcgtcgagtgcacagtgtt
ttaagaagaatagtagcaggacttctgttaaatgagagcatgacccctcaatccattctg
ctgctgagtcatggcctggtcagtcagagccttcctcttatcaccagcaagagcagacag
aaggctgctcctcctcctgaccctcggctgccaccccctagctgcctgctgctgcctcct
actccgaagagaggaggcatgaggcctgctctcagccgcacaaccaacatgcacatacta
gtggataccggacttagtctgctccactgtagtttaagaaattctaagatcaactcatcg
gtggcgtccgtacgggagatgttggatccatttgtctctctgctgctggactgtctcgat
tctatgcatgtcaaggtgataaccgaggctcttcaggtctttatttggattttgaagttt
cctctgcctgctgtggagcagaacgctgaccagctcaccaagcagctctttgttctgctg
aaggattatgccaaagctggtgctgggcatggagaaaatttccatcttgtccagaattgc
tttaaggctattactgttttagtgaagtgtgtggctaaacatcgcatcactgatacacag
ctgcaagtacttctgggatatgctgaagaggacatctatgataacactcgtcaagccacg
gcttttggcctgttaagggcgatcctgtccaggaagctggtggttccagagatggaggat
gtaatgaaaaaagttgccaaattgtctattaatggatcaaatgagcaggttcgcgttcgc
tgcagacagatttacctgaagtatctgatggattatccccttggaaagaagcttaaaagc
cattttgatttcattgttgcacagcttacatatgagtataacactgggagacagtcgact
cttgagatgctggaattcatttttcaatcattcccgcagcctcttctcctggagcactgt
ggtctcttctttgttcctttgtctctggctgtggttaacgatgactcggcacgttgtaag
aaaatggcctccctcgccatcaagacgttgttgggtaaactcgatgtgaagcacaagaac
tccatgtttactctggtcaatagctggctgaccggagaaaagatggctctgcggaggctg
ggtgctcaggtgtgtggactctttgtggaagtggaaggagaacattttaatagcagactg
gattctctgctacctcttatagagcaagaaatccacacagacaactttggtgatattgag
gaggaggagaacgagaaagctgcagacaggttgctcttctgttatctcactctaatcatc
aaactgatcaaagactgtggcttcttggagctccacaaaccttctgatacactctcaagc
atctgggctcatattgaggctcacctgcgttatcctcattcctgggtttggttgactgcc
tctcagatctttggtctgctttttgctgctcaaaaaccagaggagctgctttctatgtgg
tgctctgagaaaaacgcctccaaaaacgagcgttctacggcatctttattcctctcagct
aacctggataagaagatgagagagctcgtcttatcatgcagtcaccagctgcagtcgaaa
tttctggacatttctgctggcgagcaggtaataaagaacttgctgttcgtggccaaagta
atctacctcatctcccccaaatctgagactgtagagaatggaaaagaagaaccatcagag
gaacaaactgtggaggaaaccgaagacactgtggaagaaacagaagaggataaattggag
gatgagcaacagcagcaagctgtggaagataaggatgagaataagccaccgtctttactc
tgggtgatacggaaattctcactgttggctaaaagagaggcagctgatacccctaaaatt
ccactcaagagaacatgtgtttttaagtttttgggagctatagctgttgatcttggcaaa
gagcgtctaggcccctacctcaccaccatcatctctccattgtacagagaactggacagt
acatatgccgaccaagaccccacactgaagaacctggcacaggagctgatcgagatgctg
aagaagctggtgggattgcagaagttctcactcgcctttgctgctgtacagaaagaggct
tcacagagacgagctacacgcaagaaacacaaagccctgcaggctgtggctaatccagac
attgctgctaggaaaaagatcaagaagcaccagaagaaaactacggctaaaaagaggaaa
atagagtttttgaagccaggacacaaagcgaagaaacagaaacgtacatcactgagggat
ctggctatggttcagtaa
DBGET
integrated database retrieval system
