Trichomycterus rosablanca: 134324594
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Entry
134324594 CDS
T09921
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134324594
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134324594
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134324594
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
134324594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
134324594
NCBI-ProteinID:
XP_062862558
LinkDB
All DBs
Position
12:complement(29762589..29777658)
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AA seq
943 aa
AA seq
DB search
MAPVAQEPEIVLAQRLASNEKPVRTNALKALRKYINLRSQHIEGGFTSEDLLKIWKGLFY
CLWMQDKPLLQEELSDRISGLTQSFHTTDSQLLYFESFLQTLKREWNGIDRLRMDKFFQL
VRFMFRQIFVLLKKNNWDLSVVNKFLEVFTVQLLQTTDHVPNGMMLHILDLYMTELASVG
ADELTAKQNLTFIDPFCKTMAKTKDRLLLISISKNIFRTIIDQAPFAIEDLIKELQQGKA
EDSDSGQASEDEEEIELQEEWKSKASKMSKGKKVNGISEVKEDIKEDSEDDLGLNDDDNL
EAEEIGPVLQFDYSEIAERLFELASRSNTRNFNRTKMYSLVKIYRNLKEGIFPQDQQQEE
DDLSDSSDDELFPENKKKKKKKKRKHLKKMNEEETSTKDTKDQNETLNDTTENIKKTKKS
KKKRAGHDQTAECTPELDSQTPTETSQDQKKKPDESTQLESLPEDDSELHQKCHNQLQTA
KRVNGAPVLQNNRADPQSQLEASCAGKKKRKSKKLELSLTEVESECPLVSDKDLGSKSDR
EVIKQDGAERVKAKASEEVVAASTTTKKQKKSKKLCSISEEIKKLVESECQDSCVDSLET
PADEPTSISVKKNKKKKKSKFLVDVEVTESSAGLKAAASSKPTVVDEADVGKSSEPKPVK
KAKKKKKSVSLIEPESELETEERTVLEAAPTTQTAMLEQPPCTPTPKKRKKTQKNQAMTF
AQSLVNGVCQPTEATESPVPKSKSTKKQKAAAEEQIAELPDKLCESTVDCSSLNHVKTAK
KKRKMQTEEAGTAQSDGQTKKKISKQKDVEVSILVTPKKKLKMDKEKAKSDLITFQGLVK
PPTPLFCKTKPKSSPSTPLTGIKKFQTPTSETKKVTFGLRNNKTAEFRKTDKSLSVSPVG
PSRVAFDPKKRPASGVLKSPMVSPAVKRNKTAPKRRATAADFF
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagtagcacaggagccagaaattgttctcgctcagagattggcttcgaatgag
aaaccggttcggactaacgcgttaaaggcactaagaaaatatattaatctccgatctcaa
cacatcgaaggtggttttaccagtgaagacttgctgaaaatatggaaggggcttttctac
tgcttatggatgcaggacaaaccacttttgcaggaggaactttcagacagaatctctgga
ctgacccaaagcttccacacaacagacagtcagctgctgtattttgaaagctttctccag
actctgaagagagaatggaatggcatcgacagacttcgcatggataaattttttcagctg
gttcgcttcatgttcagacagatcttcgtgcttctaaagaagaacaactgggacttaagt
gtggtcaataagtttttagaggtcttcacagtacagctcttgcagaccactgaccatgtg
ccaaacggaatgatgctgcacattctggatctttacatgaccgagttggcctctgttggc
gctgatgagctgacggcaaaacagaatctgaccttcatcgaccctttttgcaaaactatg
gccaaaaccaaagatcgcttgttgttaatctccatcagcaagaacatcttcaggaccatc
atagatcaggcaccctttgccattgaggacttgataaaagagcttcagcaggggaaagca
gaagattcagactctgggcaagcctctgaggatgaggaggaaattgaattgcaagaagag
tggaagagcaaagcatcaaagatgtctaagggaaagaaggttaatggcatctccgaggtg
aaggaagacatcaaggaggattctgaagatgacttgggcttaaacgacgacgataacttg
gaggctgaagaaattggtcccgtccttcagtttgattatagtgagatagctgagcgactt
tttgagttggccagccgctcaaatacaaggaacttcaatcgcacaaagatgtacagcttg
gtaaagatataccggaacctaaaggaaggtattttcccgcaggatcagcagcaggaggag
gatgacctgagtgacagctcggatgatgagttgtttcctgagaataagaaaaagaagaag
aagaagaagagaaaacatttgaaaaaaatgaatgaggaggaaacttcaaccaaggacacc
aaagatcagaatgaaacccttaatgataccaccgaaaatatcaagaaaacaaagaagagc
aagaagaaacgtgctggacatgaccaaactgcagaatgtactcctgaattagactctcaa
actcccacagaaacgtcacaggatcaaaagaaaaagcctgatgaaagcacacagctggaa
tcactaccagaggatgactcagaactccatcagaaatgtcacaaccaactgcagactgct
aaaagagttaatggtgcaccagtgcttcaaaataacagagcagacccacaaagccagttg
gaggccagttgtgctggcaaaaagaagagaaaaagcaaaaaattggagttaagcttaacg
gaagtagagtctgaatgtccacttgtatctgataaagacctgggcagtaaaagtgaccga
gaggtgattaagcaggatggtgcagaacgtgtcaaagcaaaagcaagcgaggaggttgta
gcagcaagtaccactacgaagaagcagaagaaaagcaagaagctgtgctctatctctgaa
gaaataaagaaactagtagaatccgaatgtcaggacagctgtgtggacagtctggagacc
cctgctgatgaaccaacttcaatatcggtaaagaaaaacaagaagaagaaaaaatcaaaa
ttcttggtagatgtagaggtcaccgagtcatctgccggcctgaaggctgctgccagtagt
aaacccacagttgtggatgaagcagatgtaggtaaatcctctgaacccaaaccagtaaag
aaagcaaaaaagaagaagaaatctgtttctttaatagagcctgaatccgagctcgaaact
gaggaacgaacagtgcttgaagctgctcctacaacccagacggccatgctcgaacagccg
ccttgtacccccaccccaaagaaaaggaagaaaacgcagaagaaccaagcaatgactttt
gcccagagtctggtgaatggagtgtgtcagcctacagaagctacagaatcacccgtcccg
aagagcaaaagcacaaagaagcagaaagctgcagctgaggagcaaattgctgaactacca
gacaagctctgcgagtccacggttgattgcagttccctcaatcatgtgaaaacagccaaa
aagaaacggaagatgcagacggaggaggcgggaacagctcagagtgatggacaaactaag
aagaagataagtaaacagaaggacgtcgaggtttccattcttgtaacacccaagaagaaa
ctgaagatggacaaagagaaggcaaaatcagacttgattacctttcagggtctggtgaag
cctcctacaccactcttctgtaaaactaaacctaaaagcagtcccagcacacctctgact
ggcatcaagaaattccaaactccaacatcagaaacaaagaaggtcacctttggactcagg
aacaataaaaccgctgaattcaggaagacagacaaaagcttgtcggtaagtcctgttgga
ccatcccgggtggcctttgatcctaaaaaaaggcctgcatcgggcgttctgaaatcaccc
atggtttcaccagccgtgaagagaaataaaactgcacccaagagaagagcgacggcagca
gatttcttttaa
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