Trichomycterus rosablanca: 134324672
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Entry
134324672 CDS
T09921
Symbol
dbr1
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134324672 (dbr1)
03009 Ribosome biogenesis [BR:
trn03009
]
134324672 (dbr1)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134324672 (dbr1)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
90S particles
RNase
134324672 (dbr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
134324672
NCBI-ProteinID:
XP_062862665
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All DBs
Position
12:complement(22767237..22778010)
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AA seq
571 aa
AA seq
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MKIAVEGCCHGELDKIYDTIGYLEQKEGMKVDLLLCCGDFQAVRNEGDLKCMAVPPKYRH
MQTFYKYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGYAGIVRYKGIRI
GGLSGIFKSHDYRKGHYEFPPYNQETLRSVYHIRNSDVFKLKQIQLPIDVFMTHDWPRGI
YHYGSTEQLLRKKQFLREEVESGTLGSPAAAELLNHLQPSYWFSAHLHVKFAAMMQHKGK
GNAAPKTTKFLSLDKCLPHRDFLQIVEIADRPGSSDKLEYDPEWLAILKATSHLQKPSPN
IWHPPENNGLYTRWDYSASKEDMLDVVSALNGDLVIPENFSLTVPAYDPSRPLPYTSPSY
CTNPQTTEMCATLGLTDIYALASQAANNTATAVEGASEEEDEDNQSSGSVDEPSEYPTDT
SILSSSYNPDEITIEDEWDEEEEKGKDEGNREQEGTDAVVPVVPVGAQDSDRDSSPHRTA
AGRLVLPAPKAAPESDEPSNLGFSVPPPSAFTPPSACFSQMSSEEEGTALPARVPKRSSG
ETKETLNPTDSTPRIKRRNQIIYTAVDDEDS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagctgtggaaggctgctgtcatggcgagctggacaagatatacgacaccatt
ggttacctggagcagaaggaaggcatgaaggtggatctgctgttgtgctgtggagacttt
caggctgtgcggaatgagggggacctaaagtgcatggcagtgccacctaagtacaggcac
atgcagacattttataagtactattctggggagaagaaagcacctgttttgaccatcttc
attggtggcaaccatgaagcttctaatcatttgcaagaacttccttatggaggctgggtg
gctccaaatatatactatctaggttatgctggcattgttcgctacaaaggtataagaatc
ggtggcctttcaggaatttttaaaagccatgattacagaaaagggcactatgagtttcca
ccatacaaccaagaaacattacgcagtgtctaccacattaggaacagtgatgtatttaaa
cttaaacagatccagttgccaattgatgtcttcatgacacatgactggccacggggaatt
taccactacggcagcacagagcagctgctaaggaaaaaacagttcttgcgtgaagaggtg
gagtcaggtacactaggcagtccagctgctgctgagctgcttaatcatctgcagcccagc
tattggttctctgcccatctgcacgtcaagtttgctgccatgatgcagcacaagggaaag
ggtaatgctgcaccaaagaccactaaattcctctctttagacaagtgtcttccccacaga
gactttcttcagatagttgagatagcagacagacctggttcttctgacaagttggagtat
gatccagagtggctggccatcctgaaagccacctctcatcttcagaagccctcgccaaac
atctggcatccacctgagaataatggcctttacaccaggtgggactacagtgcttcaaag
gaggacatgttagatgtggtgagcgctttaaatggtgacctagtcatccctgagaatttt
agtttgactgtgccagcctacgacccatctcgccctctgccttacacttccccgtcctac
tgcacaaacccccagaccacagagatgtgtgccactcttggcctgactgacatctatgct
ctggcaagccaggctgctaataacactgcaacagctgtggagggtgccagtgaagaggag
gatgaggacaaccagagctcaggtagtgtagacgagcccagcgagtaccccactgacacc
tcaattctttccagttcttacaaccctgatgagatcaccattgaggatgagtgggatgaa
gaagaggagaagggaaaagatgaagggaacagagagcaggagggcacagatgcagttgta
ccagtggttccagtaggagctcaggacagtgatagagacagtagccctcacagaacagca
gcaggtagactcgtcttaccagctcctaaagctgcaccagagtcagacgagccttcaaat
ctgggtttcagtgttccaccaccatctgcctttacaccgccctctgcctgtttttcccag
atgagctcagaagaagaaggaactgccttaccagctagagtacccaagcgctctagtgga
gagaccaaagaaactttaaatcccacagacagcacacccagaattaaacgccgcaaccag
ataatttacacagcggttgatgatgaggacagttag
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