Trichomycterus rosablanca: 134324673
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Entry
134324673 CDS
T09921
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B isoform X1
KO
K07888
Ras-related protein Rab-5B
Organism
trn
Trichomycterus rosablanca
Pathway
trn04137
Mitophagy - animal
trn04144
Endocytosis
trn04145
Phagosome
trn04148
Efferocytosis
trn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134324673 (rab5b)
04145 Phagosome
134324673 (rab5b)
04137 Mitophagy - animal
134324673 (rab5b)
04148 Efferocytosis
134324673 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134324673 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134324673 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134324673 (rab5b)
04031 GTP-binding proteins [BR:
trn04031
]
134324673 (rab5b)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
134324673 (rab5b)
Endosome - Lysosome transport
134324673 (rab5b)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134324673 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
134324673 (rab5b)
Exosomal proteins of colorectal cancer cells
134324673 (rab5b)
Exosomal proteins of melanoma cells
134324673 (rab5b)
GTP-binding proteins [BR:
trn04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
134324673 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
134324673
NCBI-ProteinID:
XP_062862667
LinkDB
All DBs
Position
12:22754765..22767161
Genome browser
AA seq
214 aa
AA seq
DB search
MSTRGNARTNGNLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLSDKRLVEYEEAQTYAEDTGLLFMETSAKTAMNVNEIFLAIAKK
MPKMDTQNPTHAARHRGVNLQDPDAQSSRSCCGN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccgtgggaatgccaggaccaatggaaacctacctcagactaagatctgccag
ttcaagttggtgctgctgggagacatggcagtgggcaagtccagcctggtccttcgcttt
gtcaagggtcagtttgatgagttccaggaaactacaattggagctgccttcttggcccag
tcagtttgtctggatgacactacagtcaagtttgagatttgggacacagctgggcaggaa
cgctatcacagcctggcacccatgtactatcgtggagcccaggcagccattgtagtattt
gacataacgaagccggaaacatttgagcgagcaaaggcctgggtaaaggagcttcagagg
caggctagtccaaatatagtcattgcactagctggaaacaaggctgacctttcagacaag
agactggtggaatatgaggaagctcagacgtatgctgaggacacaggcttgcttttcatg
gagacttctgcaaagaccgctatgaatgtcaatgagatattcctggctattgcaaagaag
atgccaaagatggatacacaaaatccgacacatgccgcccgacacaggggagtcaaccta
caggacccagatgcccagtccagccggagctgctgtggaaactaa
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