Trichomycterus rosablanca: 134324723
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Entry
134324723 CDS
T09921
Symbol
fer1l6
Name
(RefSeq) fer-1-like protein 6
KO
K22127
fer-1-like protein 6
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134324723 (fer1l6)
Membrane trafficking [BR:
trn04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134324723 (fer1l6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
134324723
NCBI-ProteinID:
XP_062862723
LinkDB
All DBs
Position
12:4619491..4644004
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AA seq
1835 aa
AA seq
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MDKDKTDSGLPSKGVFGLKVKKKKKKGSKSLVFANSAAQEEPETKAPDEEPLVKDPLNVP
AETAECASNLVPSQYLSFREHVNTKRSKTVAKVLETESRPQTFQISINITEARQLVGENI
DPSVVIEIGDEKKQTSVKESTNAPFYNEYFVFDFFAHQEIFFDKVIKLSVMHSKIMKSYC
IGAFRIDVGTVYNQPGHQFTNKWAALFDPLDVRTGVKGHLKCDICVTAKGDVLPRSQKFS
DAEEQIEKNPLLPEGFPSMRPWASYSVKVYRAEGLPRMNSGLMANVTKAFVSDNTALIDP
YVEVSFFGQTGRTSTQKSTADPVWNEQVVFKEMFPPLCQRLKIQILDEGSMNDVAIGTHY
IDLRRISSDQDGDNGFLPTFGPAWVNIYGSSRNSTLVDDSHDMNEGIGEGVSFRGRIYIQ
LTVEILTGGAESKSLLSLKTPKDAKGGKGAAKDPKAGAGGAGGEEEKTKVTGSIVLPVDP
PEMISDEDKENFLLFGAVFEATMIDRRIGDKQISLEFTIGNFGNFIDGTAQTASKKKVEN
PSSQEADTTSLLENQTPPMTCKSTTPPEKPLIGHNNRTYFYLPFLNNKPCVHIWSAWENW
TYRLHQSNMLDRIAKMFEQGVAKVAELEKLVNPNAEPLMRAVLQEFCKDAREFIGFAENK
VKKTYLNVLDKKRLMLCKQELESMIGVAGTITELKRKPLTVKEMLAKAQRLSHRIRFLVE
EPQHTLPDIFVWMLSNNKRVAYARIPARHLLYSENLVEKGKDCGKIKTLFLKPPSKRSTG
WIVQAKVDVYLWLGTSKETSYMMENLPEGFEPQGVLSEDGKCIFPETIFFKEKHEFQLRS
HMYQARGLIAADNTGLSDPFARVSFLSNSQVTAIINQTLTPTWNQMLILNKVSLYGELSE
LVKEPPLVVIEVYDDDALGKAEYLGSTVAVPEVRLNEEMYIPPQLQYSALYCGGLSGGDI
LGAFELIQTGQNPLPAIEEPEGGNYTVPSYIRPVLCKYRIEVLFWGLRELKKVQLLSVDR
PQVFIECAGKGIHSSVIQSYKSNPNFSVILDSFDVELPENEYLHPPLTVTVVDWRAFGRS
TLVGSHVINNLGLFKYTPPALPPSRAQSQDTLAIERNELLFLAAPLPVQEGTEAQSSGDV
SVTIDPEVCKIPVTEPVPQDKEIKESRKSKRRSSKRKKRTAADESADSVIDWWSKYYASM
EKIQLVKQREINPFPDLYEAVPSLHNLISDGISTLGKGMKEKKREVLKGSVLEQPKIATL
TIYDKELEAEFGPFDDWVKTFELFRGKANEGDSSGAERLVGKFKAGFCLYKLPEGDEGST
DPGEYKISQGIPPNSPVNVLIRVYIVSASNLHPADPDGKADPYIVLKLGKTEIKDRDNYI
PKQLNPVFGRSFEILATFPKESLLKVLIYDFDLVGGDDLIGETEIDLENRFYSRHRATCG
LSTEYAIDSYNAWRDAINPSDLLIKLCKENKLDHPVFSPGRITIGDKVYTGKTVFIDEDQ
VVESYEHLALKVLHRWEEMPGVGCKLIPEHIETRTLYIKNKPGMDQGQLQMWVDIFPMDM
RHPGPPVDISPRKPKGYELRIIIWNTEDVILEDTNFLTGQQSSDIYVKGWLKGLEDDGQE
TDVHYNSLTGEGNFNWRFVFPFHYLPAEKQVVISKRDHIFSLDKTEQKLPAVLVLQVWDF
ERLSSDDFLGSVELDLHGFPRGAKTAKLCKMDMLTDISDSISIFQQKRAKGWWPFVKAEE
LTGKVEAEFHLVTADEAEKNPVGRARKEPEPLEKPNRPDTTFSWFVNPFKCFFHLIWKNY
KKYIIAGLVLLILAVFLALLFYTLPGAISNKIVSG
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggataaggacaaaactgactctggattaccaagcaaaggtgtttttggactcaaggta
aagaagaagaagaagaaaggcagcaaaagtctagtctttgcaaacagcgctgctcaggaa
gaacctgagaccaaagctcctgatgaagaaccattagttaaagatcctttaaatgtgcca
gctgaaaccgctgaatgtgccagtaatctcgtcccctctcaatatttgtccttcagagaa
catgtcaatactaagagatccaaaactgttgctaaagttttggaaactgaaagcaggcca
cagactttccagatctccatcaatatcacagaggccagacagctggtgggtgagaatatt
gaccccagtgtggtgattgaaattggagatgaaaagaaacaaacatcggtaaaagagagt
acgaatgcacccttttacaatgagtactttgtgttcgacttctttgcccatcaagagatc
ttttttgacaaagttattaaactttcagtgatgcattcaaagatcatgaaaagctattgt
ataggagcattcagaattgatgtaggaactgtctacaatcaacctggtcatcagttcact
aataagtgggcagctcttttcgatccattagacgtcaggacaggagtgaaaggccacctg
aagtgtgacatctgtgtgacagccaaaggagacgtgttgccccgttctcaaaagttttct
gatgctgaagagcagattgaaaagaacccgctgctacctgaaggctttccctcgatgcga
ccatgggctagctattctgtcaaagtctatcgggcagaaggtcttcccagaatgaactct
ggcctcatggccaatgtaaccaaagcctttgttagtgacaacacagctctcatagatccg
tatgtggaggtgtcattcttcggccagacaggacggacatccacccagaagagcacagca
gaccctgtgtggaacgaacaggtggtttttaaagaaatgtttcctcctttgtgccaaagg
ctaaaaattcagatattagatgagggaagcatgaatgacgtagcgattgggactcactat
attgatctgcgcagaatctccagtgaccaggatggagataacggtttcctcccgacattc
ggtccagcctgggtcaacatctacggttcatcccgtaactcaactcttgtggatgatagc
catgatatgaatgagggaattggggaaggggtgtcattcagaggtaggatttacatccag
ctaactgtggagatcctgactggaggggctgagtcgaagtctttgctctccctcaagact
cctaaagatgccaagggaggaaagggagcagctaaagaccccaaagctggagcaggagga
gcaggtggagaggaggaaaaaaccaaggtcacaggctcaatagtgctacctgtggatcca
ccagaaatgattagtgatgaggacaaggagaacttcctgctgtttggtgctgtgtttgag
gctactatgattgacaggaggattggtgataaacaaattagcctcgagttcacaattgga
aactttggtaacttcatagatggtactgctcaaacggcttccaagaaaaaagtggagaat
ccttcaagccaagaagctgatacaacttctcttctagaaaatcaaacaccaccaatgacc
tgcaagtccaccacaccacctgaaaaacctcttataggacataataacaggacctacttt
tatttaccttttttaaataataagccttgtgttcatatatggagcgcttgggaaaactgg
acataccgtctccaccagtccaacatgctggataggatagccaaaatgtttgaacaaggt
gtggccaaggtggcagagctggaaaagctggtgaatcccaatgcagagcctcttatgaga
gctgttttacaagaattttgtaaagatgccagggagtttatcggttttgctgagaacaag
gtgaagaaaacttatttaaacgtgttggataagaaacggctcatgctgtgcaagcaggaa
ctggagagtatgattggtgtagcaggaaccatcactgaactaaagaggaaaccccttact
gtcaaagagatgctggcaaaggcgcaaagactcagtcacagaatcagattcctggtggaa
gagccccagcacaccctgccagatatatttgtgtggatgctcagtaataataagcgtgtg
gcgtacgcccgcatccctgcacgccacctgctttactctgagaacctcgtggaaaaagga
aaagactgtggaaagatcaaaaccctctttcttaagcccccttctaagcgcagcacaggc
tggatagtccaggctaaagtggatgtgtacctctggctcggcaccagcaaagagacttcc
tatatgatggaaaatctcccagaaggctttgagccacaaggtgtattatcagaggatggc
aaatgcatctttccagagacaatatttttcaaagaaaagcatgagtttcagctgaggtct
catatgtaccaggctcgtgggcttatagcagcagacaacacaggcctctcagaccccttt
gcaagggtgtcatttctctccaacagtcaagttactgctataattaaccagactctaacg
ccgacctggaaccagatgctgatattgaataaggtgtctctgtatggagagctcagtgaa
ctggtgaaagagccacctctggttgttattgaggtctacgatgatgatgcactgggaaaa
gcagagtatcttggctccactgtagctgtaccagaggtcaggctgaatgaggaaatgtat
attccccctcagctacagtacagtgctctgtactgtggtggcctgtccggtggagacata
ctcggagcttttgaactcattcagacaggacaaaatcctttacctgccatagaagagcca
gaaggtgggaactacactgtaccctcttacattcgacctgtgctatgcaagtacagaatt
gaggttttgttctggggtttaagagaactgaagaaagtacagctcctttccgtggatcgg
ccacaggtcttcattgagtgtgcaggaaagggaatccactcgtctgtgatacagagctac
aagagcaacccaaactttagtgtgattttggactcatttgatgtggagctgcctgaaaat
gagtaccttcacccccctctcactgtaactgtggtggactggagagcctttgggagaagc
actttggtgggcagtcatgtcataaacaacctgggcttgttcaaatacactcctccagct
ctgcccccttccagagcgcagtcccaggacacactagctatagaacgtaatgagctttta
tttctagctgcaccgcttcctgtacaagaaggaactgaggcgcagtccagtggggatgtt
agcgttactatagatccagaggtgtgtaagatccctgtaactgaaccagtgcctcaggac
aaggagatcaaagaatctagaaagagcaagcgaaggtcttcaaaacgaaagaaacgcacg
gccgctgatgagtctgctgacagcgtcattgactggtggtccaagtactacgcatcaatg
gagaaaatccaactggtaaaacaaagggagatcaatccatttcctgacctttatgaagct
gttccttcacttcacaatttgatctcagatggaatttctactctgggtaaaggaatgaaa
gaaaagaaaagagaggtcttgaagggctctgtactggaacagcccaaaatagccacctta
acaatatatgacaaggagctggaggcagagtttggtcctttcgatgactgggttaaaaca
tttgagctcttccgtggtaaagcaaatgaaggagacagctctggtgctgagaggcttgta
ggaaagttcaaggctgggttctgtctgtataagctgcctgaaggtgatgaaggatctacg
gatccaggagaatataaaataagccagggaattccacccaacagtcccgtaaacgtccta
atcagagtctacattgtttcagcctcaaacctccatccagctgaccctgatggaaaggca
gatccttacattgtgcttaagcttggaaaaactgaaatcaaagacagggacaattacatc
cccaaacaactgaaccccgtgtttggcagatcttttgaaatccttgccacctttcctaaa
gaatccttactaaaggttctcatttatgattttgatttggtcggtggagatgatttgatt
ggtgagactgagattgatttggagaatcgtttttatagcaggcacagagccacctgtggc
ctttctactgaatatgccattgatagctacaatgcctggagagacgccattaatccaagt
gacttgctgataaagctctgtaaagaaaataaactggaccacccggtttttagtcctgga
agaataaccatcggagataaagtttacactggcaaaactgtattcatagatgaagaccag
gtggtcgagtcttatgaacacttggctctgaaggtgctacacagatgggaagagatgccc
ggtgttggctgcaaactgattccagagcacattgagacccgcactctgtacataaagaat
aagcctggcatggaccagggtcagctgcagatgtgggtagacatctttcccatggacatg
cgtcatcctggacctcctgtggacatttcccctcgcaagcccaaaggttacgagctgagg
atcataatctggaacacagaagatgtcattttggaagacacaaatttcctaacaggccaa
caatcgagtgacatctatgtcaaagggtggctgaagggccttgaagatgatggccaggaa
acagacgtgcattataattctctgaccggtgagggcaacttcaactggcgctttgttttc
ccctttcactacctcccagctgagaagcaggtggtcatcagcaaacgagatcatatcttt
tctctggacaagacagaacagaagctgcctgcagtcttagtgctgcaggtgtgggacttt
gagaggctgtcatctgatgatttcctgggctcagtggagttggatctacatgggtttccc
cgtggtgccaaaacagcaaaattatgtaagatggacatgctaacagacatcagtgactct
atatccatctttcagcaaaaacgtgccaaaggctggtggccttttgtgaaggctgaagag
ctcacgggaaaagtggaagcagagtttcacttggtgacagcggatgaggcagagaaaaac
ccagtaggacgagcacgcaaggagccagaaccactggaaaaacccaatcggccagataca
accttctcctggtttgtaaaccccttcaaatgcttcttccatctgatctggaagaactat
aagaagtacatcatcgctggcctggtgttactgatcctggctgtgttcctcgctttgctg
ttctacactctgccaggagcaataagcaacaagatcgtcagtggatga
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integrated database retrieval system