Trichomycterus rosablanca: 134324748
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Entry
134324748 CDS
T09921
Symbol
itga6a
Name
(RefSeq) integrin alpha-6
KO
K06485
integrin alpha 6
Organism
trn
Trichomycterus rosablanca
Pathway
trn04382
Cornified envelope formation
trn04510
Focal adhesion
trn04512
ECM-receptor interaction
trn04514
Cell adhesion molecule (CAM) interaction
trn04518
Integrin signaling
trn04810
Regulation of actin cytoskeleton
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134324748 (itga6a)
04514 Cell adhesion molecule (CAM) interaction
134324748 (itga6a)
04518 Integrin signaling
134324748 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134324748 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134324748 (itga6a)
04810 Regulation of actin cytoskeleton
134324748 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134324748 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134324748 (itga6a)
04515 Cell adhesion molecules [BR:
trn04515
]
134324748 (itga6a)
04090 CD molecules [BR:
trn04090
]
134324748 (itga6a)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134324748 (itga6a)
Exosomal proteins of breast milk
134324748 (itga6a)
Cell adhesion molecules [BR:
trn04515
]
Integrins
Integrin alpha subunits
134324748 (itga6a)
CD molecules [BR:
trn04090
]
Proteins
134324748 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
134324748
NCBI-ProteinID:
XP_062862755
LinkDB
All DBs
Position
12:9229503..9246267
Genome browser
AA seq
973 aa
AA seq
DB search
MGVTVESQGPGGKIVTCAHRYQRRLFVNTSQESRDITGRCYVLSQDFSIDTQSDEDGGNW
KFCEGRTRGHERFGACQQGLAATFTKDYHYVIFGAPGAYNWKGIVRAEQKNNTLLEMGFY
DDGPYEVGDESRLDPDLVPVPANSYLGFSLDSGHSISEKGKLIVVSGAPRANHSGAVILL
KKESEVSTMLSTEYILEGPGLASSFGYDVAVVDLNGDGWQDIVVGAPQFFQRDGEVGGAV
YVYINKAGRWNAVVPTRLNGTKDSMFGLAVKNIGDINLDSYEDIAVGAPYADGGFGIVYI
YHGSASGINTKPAQILEGRHHGIKMFGYSLAGKMDLDDNSYPDLAVGSLSDAAFVYRSRP
VISIKKEIKVTPKEIDLTKKTCGNSICLTVETCFTYKANPATYNPRLFISYLVETETHRR
KQGLPSRVSFVDNKDFRSTGTLELRGQNKKVCYKTKLKLQENIKDKLRAIPVEVSVAIKG
AKRGKSHSSLPELVPVLDSNVPNKTSTEVQFLKEGCGTDNICQSNLQLQYKFCYKESNQD
VFPPLPMKNGIAVVSLSDQKDIAVEVTVTNKNGDDAHEAKLVGSFGDSLSYSGFRSQRST
DKHVICAANQNGSQVDCELGNPFKRDSEVTFYIILSTARIFFDTTEIEVDLQLETTSLQG
GLGKVKAKAKVVIELLLSVQGTARPSQVYFGGNVRGASAMKSEEEVGSLIEYEFRVINLG
KPLKSFGTASLDIQWPKESAVGKYLLYLVNIKSKELQQISCTPEAEINHLKLTEESSFSR
RKREVEERKTSEESKISLFTDQRKHKTLSCATAKCVEIKCPLQGLDSSAHIVLRSRLWNS
TFLEDYASYKYLDLLVKASISLDFAAKNIVLKNPETQVRLTVFPESTVAHYGGVPWWIIL
VAVLAGIIMLALLVLLLWKCGFFKRSKYDDSIPKYHAVRIRKETRPFSDESVMFDPFEKK
QWMTVWSENESYS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgactgtggagagtcagggacctggtggaaagattgtgacatgtgctcaccgg
taccagcgacggctgtttgtaaacacatcgcaggagtcacgggacatcactggccgctgc
tacgtactcagtcaggactttagcattgacacccagtcagatgaggatggagggaactgg
aagttctgtgaaggtcgtaccagaggacacgagaggttcggggcatgtcagcagggactg
gctgctacctttaccaaagactaccattatgtcatctttggagcccctggagcttataat
tggaaaggcattgtacgagcagagcagaaaaacaacactctactggaaatgggcttttac
gatgatggcccatatgaagttggggatgaaagccgtctggatccagacctggtgcctgta
cctgctaacagttacttaggtttctcgctggattctggtcacagcatctctgagaagggc
aaactgattgtagtgtctggagctccaagagccaatcacagtggggcagtgatcctgctg
aagaaagagagtgaggtgtctaccatgttgtccacagagtatattctggagggacccgga
ctggcatcctctttcggatatgatgtagcagttgtggatctgaatggagatggatggcag
gatatagtggtgggagctcctcagttcttccagagagatggtgaagtcgggggagcagtc
tatgtctacattaacaaggccgggaggtggaatgctgttgtccccacccgtctcaatgga
actaaagactcaatgtttggactggcagtgaaaaatattggagacatcaatttggattcc
tatgaagacattgcagtgggtgctccctatgcggatggaggctttggtatagtctacata
tatcatggatcagctagtggcataaacaccaaaccagcacagattctggaaggaaggcat
catggaataaaaatgtttggctattcactggctgggaaaatggatttggatgataactcc
tacccagatcttgcagttggatctctgtctgacgctgcatttgtttataggtccagacca
gttatcagtataaaaaaggaaatcaaggttacaccaaaggaaatcgacctgacaaagaaa
acatgtggcaacagtatttgcttaactgttgaaacctgctttacctataaagcaaatcct
gctacgtacaatcccagactctttatttcctacctggtggagacagagacacaccgtaga
aagcagggtttaccctctagagtatcctttgtggataacaaggacttccggtctacaggc
acactggagctgagaggccagaataagaaagtctgttacaagaccaaactgaaacttcag
gaaaacatcaaggataagctaagagcgatccctgttgaggtatctgttgctattaaaggt
gctaaaagagggaaaagtcatagctcactaccagagctggtgccagtgttggactccaat
gtacccaacaagaccagcactgaggtacagttcctaaaagaggggtgtggtactgacaac
atctgtcaaagtaatctgcagcttcaatacaaattctgttacaaagagtctaaccaggat
gtctttcctccattaccgatgaagaatggtattgctgtggtatctttgagtgaccagaag
gacattgccgtagaggtcactgtgacaaacaagaatggagatgatgctcatgaagccaaa
cttgtaggctcattcggtgattcactttcatattctggattcagatctcagagaagcaca
gacaagcatgtgatctgtgcagccaatcaaaatggctcgcaagtggattgtgagttgggg
aaccctttcaaaagagactctgaggtcacattttacattattctgagcactgctaggatt
ttctttgacaccactgagattgaggttgaccttcagctggagacaactagtctgcaggga
ggcttgggaaaagtaaaagctaaagctaaagtagtgattgagcttctgctgtctgtacaa
gggactgcccgaccatctcaggtatattttggagggaacgttagaggagcaagtgccatg
aaatcggaggaggaagttggcagtttgattgaatatgaattcagggtaataaatttgggc
aagccattgaaatcgtttggcacagcctctcttgacatccagtggcccaaagaaagtgca
gtgggaaaatatctgctttacctggtgaacataaaatctaaagagctgcagcagatctcc
tgcacacctgaggcagagatcaaccatcttaaactgactgaagaatctagtttctccagg
aggaaacgtgaggtagaggaaagaaagacgtcagaagaaagcaaaatatcactttttaca
gaccaaagaaaacacaaaaccctgtcgtgtgctactgcaaaatgtgtggaaatcaagtgc
cccctgcagggattagacagtagtgcacacattgttctgagatcacgcctttggaactct
acgttcctagaagattatgcttcctataaatacctcgatctattagtgaaagcctcaatc
agtcttgattttgctgccaagaacattgtgctgaagaatcctgagacacaggtgaggctg
actgtatttcctgaaagtacagtggcacactatggtggtgttccgtggtggatcattctg
gtggctgtactagccggaataataatgctggctcttctagtgcttctactgtggaagtgt
ggattttttaaacgttccaaatacgatgacagcattcccaagtaccatgctgtaaggatt
cgtaaggagacacgtcccttttctgatgagagtgtcatgtttgatccctttgagaagaaa
cagtggatgactgtttggagtgaaaatgagagttactcctga
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