Trichomycterus rosablanca: 134324964
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Entry
134324964 CDS
T09921
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134324964 (scfd1)
Membrane trafficking [BR:
trn04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
134324964 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
134324964 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
DUF3882
PS_pyruv_trans
Motif
Other DBs
NCBI-GeneID:
134324964
NCBI-ProteinID:
XP_062862997
LinkDB
All DBs
Position
13:complement(14055236..14103082)
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AA seq
632 aa
AA seq
DB search
MAASIREKQTVALKRMLNFNAPPIKNTSAEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ANAALAANAVNQVTKVFDQYLNFITLEDDMFVLSNQNKEQISYHAINKPDIMDTDMEAIM
DTVVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDTMGTGQ
FSFQRPLFVLADRNVDLATPLHHTWTYQALIHDVLDLHLNRVTMDESSGSEASPAGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAESVQEELDAYRSQEEEVKHLKSIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLNHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTPEDKMRLFLIYYITSQQPPSESDLEQYKKALTDAACDLSPL
NYIKQWKAFTKIAAGPTNYGNSGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
LDNLMDMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
TKAKQGKRVLYGCSELFSAAQFLKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatccgggaaaaacagacagtggccttgaagcgaatgctaaactttaat
gcaccacccataaaaaacacatcagcagaaccagtatggaaggtccttatttacgatcgg
ttcggccaggatattatctctcctcttctatcagtgaaagagttaagagacatggggatc
acgcttcacctattattgcactccgacagagatcccatcccagatgtccctgcaatttac
tttgtaatgcccacagaggagaatatagacagaatatgtcaagacctgcggaaccaactt
tatgagtcttactacctaaacttcatctctgcaatctccagaagcaagcttgaagacata
gccaatgcagctcttgcagcaaatgctgtgaatcaagtaaccaaagtgtttgatcagtat
ttgaacttcataacactagaagatgacatgtttgtgctcagcaatcaaaacaaagaacag
atctcctatcacgcaatcaacaagccggatatcatggacacagatatggaggctataatg
gacacagttgtcgacagtcttttctgcttctttgttactcttggtgctgttccaataatc
agatgtccaagaggaaacgcagctgaaatggtagctgtgaaacttgacaagaaactgaga
gagaatttgcgagatgctcgtaacagcttgttcactggagacaccatgggcactggccag
ttcagttttcagaggccactatttgttcttgctgaccgaaatgtggaccttgccacccca
cttcatcacacatggacttaccaagccctaattcatgatgtcctggatcttcatctgaac
agggtcactatggatgagtcttcaggatcagaagctagcccagcaggggcacggcccaag
aaaaagaacaaaaagagctatgatctcacagccgctgacaagttttggcagaaacataaa
ggaagtccatttcctgaggtagcagaatcagtgcaggaagagttagatgcatataggagc
caagaagaggaggtcaagcatctaaagagcattatgggccttgaaggggaagatgaagga
gccattagcatgttgtctgacaacactgccaaacttacctcggctgtcagttctcttcct
gagcttctagagaaaaagagactaattgaccttcacactaatgttgctacagcagttttg
aaccacattaagtcacgcaagctggatgtgtactttgagtatgaggagaagcttatgagc
aagtccactctggacaaatctctgctggatattatcagtgaccctgatgctggaacacca
gaggataagatgagactcttcctaatctactatatcacttcccagcagcctccctcagag
agtgatcttgaacaatataaaaaggctttgactgacgctgcttgtgacctctccccctta
aactacataaagcagtggaaagcttttacaaagattgctgctggaccaaccaactatggt
aacagtggagtgaaaccaatgggcctcttctccagggtgatgaacactggttcacagttt
gtaatggaaggtgtgaagaatctagtcctgaaacaacataacttgccagttactcggatc
ttggacaacttaatggacatgaaatcaaatccggaaacagatgactacaggtactttgat
ccaaaaatgctccgtggcagtgaaagctccattcccagaaacaagaacccatttcaggag
gctattgtttttgttgttggtggtggcaattacatagagtatcaaaatcttgtcgactac
acaaaggccaaacaggggaaaagggtgctgtatggctgcagcgagttgtttagtgcagct
cagttcctgaaacagctctctcagcttggtcagaagtaa
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