Trichomycterus rosablanca: 134324986
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Entry
134324986 CDS
T09921
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134324986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134324986
03021 Transcription machinery [BR:
trn03021
]
134324986
03036 Chromosome and associated proteins [BR:
trn03036
]
134324986
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
ARID
134324986
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134324986
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134324986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
134324986
NCBI-ProteinID:
XP_062863034
LinkDB
All DBs
Position
13:complement(31688755..32007201)
Genome browser
AA seq
2023 aa
AA seq
DB search
MAAQVASAPATSNNKTKTLSGALGQDINPGKRAGGLGDVRSPSNNNNTTTNNNVDRPRTD
NQRSGARDNVIGSNSDQHMLRKSAEDQPCSRYEQISLAPTPHATHAQGAGGAGGGVGKTP
GSDFNHYYGSSRSYFDQHGTLMYPASNHVEAAPNSHEGHQKSQYGYSGYGSAGYTNPSPG
QNKCAPTASANSAGGFARFPGHNQHPSGSTPTLNQLLTSPGPMMRYYEYSGSKDPGQQYG
GTGHGWPGQRAHPGPNSAQSANRNQVGSMDFMGMKRSQIYGMSSSPYSQQQQGVAYPGQP
YGSPSTHRYPMSMQGRGQMSMGTMPYPQQQVPAHFNQQGMGGYGPQTQSGYYSQSQQPQQ
QQQQQQQVVTPTQAPYSQPHTAAQQETQESYGNRTQPAGNAGKPNHDEMGLIQQNRPASL
PDLSGSIDDLPMGTEAALSSAVSAPGSSSSQEDQSNQNQSPFSPHTSPHVSNMRTGPSPP
PTASPSPASSNQISPTNGPGSQLAPQTPGNISDSSSHSSLNQDRGFIRRSQNQYGPQQSG
PPMSPHLSSRNQMQQGMSVYQQNNSTGSYGPPGGQYGPQGNYSRLPAYGVMNSTNCSGLG
PGMNNSLAINISSPVHGQGPGQSVSMGRLQGAGGRVYTGGGNSMAPTSPSMPQSAGPGMG
PPAGNVNRKAQDGAIQLTGSSVLGRQGGYCGMMGTSTSYSQSVGNATMIMSPQSSSSNTS
PPGLMGDSGDILLPSDSKQTSSSKEEVLSASDPPKPIKDGSSSQCGSEPPTPSALTPSPA
SLSSYHGDDSDSLSSPPWPKTPSSPKTMNEKIPRLYEMGGEPERKNWVDRYLSFMEDRGT
PVPHLPIVGKKVLDLCKFYMAVKELGGLAMVNKNKKWRELSSMLGFGSSSSSASSLKKHY
IQFLFTYECKVERGEEPPVNPCPAADTKKQSKIEPPSPANSGSLQGPQTPQSTGSSSMPE
MPCELKPPTPATTPQGHINNVQSNSNNSISVQDPFSDGIDPAFQKRNMLNSGGPYQSSMN
PMDSMMRMQYENKDHFAGMRKAVGAESCMPGQMPPAGMQDIYGRSPSGGTLAGLGMGQRS
QYPYGQGYDRRSDHMMGLDGNLGPHGNQGNMSHANSDGSMCASNRYPNQQRHEGYGQQYP
AMPYTVHPSGMYPQQQGYKRPLDGMYSPPAKRHEGEVYGMQYGGPQTDMFGQYGGNYPER
RTMPAQFPYSYSRDRLQNTSQGPQHHPVQHNMMSTGHSVSTGDGPTHMWPTRTDMPYPYP
NRHGTPSQTPPYPGMGRLDDMDGLRMDSHWPGHQRQSPYISTHSNSMPTMNSRQPPSSYP
SSNHISCEPIPGSYQRSIEAHIPPNKMGFLQSMKMHKPVMPMPGGSSGGISGQMPPNMRK
DYPLGCVEGTQPHLKPRRKLNSKDTGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDS
TVASFNLAQLPGFLELIVEYLRRCLIEIFGILEEYELGIISEKSPAVDEKEKHLITSEIP
CEPEPSQETPKMEDQNLDGEVEKSQDGNQEKEILTKTDEEDDQKAKDIMEPVGGQSSVAR
EPRPKQASKYDKLPVKIVPKNELITDISDELGYVQSFTSGLLHWKAGGGDLTSHIQTCFE
GSTEYGTKTVPNKQDGSGLKSEVDNSRVATIDDVLPPRLRALSEEEDLLSSSSDGLCSFR
LFEKQKGFVLLEDEPCCPSESSLCTTASWQDALASRCICVSNIIRSLSFIPGNDTELSKH
PALILILGRLLLLHHEHPERRRNYPSCDKEEIREDKEGLSGSQDEWWWECLVALRENTLV
TLANIAGQLDLSVYPESICLPVLDGLLHWMVCPSAEAQDPFPSAGPHSQLSPRRLVLECL
SKLSIQDGNVDLILATPPLNRQEKFYAKLVSQVRERKLQVFREMAVAVLSNLARGDPSAA
RAIAIQKNSVGNLVGFLEDGITMTQYHQNPHSLLHMGHPPMEQPSVSMLCRAAKALLELA
KVEENRSEFLLYESRLLDVAVSTVLNSSIVGIVCEVLFYLGKS
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcaagtggcatcagccccggcgacgtctaataacaagaccaagactttatca
ggggctttgggacaagatattaaccctggaaaaagagcaggaggactaggagacgtgagg
agcccgagtaataataacaacaccaccaccaataataatgtggatcgacctcgcaccgac
aatcaacgatccggggcaagagacaatgtcatcggatccaattctgatcagcacatgctg
agaaaaagcgctgaagatcagccctgcagcaggtacgagcagatcagcctggcaccgact
ccccatgccacccatgcccagggcgcaggaggtgcaggagggggcgtcggaaaaacaccg
ggctcagacttcaatcactattatggaagttcaagatcgtacttcgatcagcatggcact
ttaatgtacccggccagtaatcatgtcgaagctgctccaaattcccacgaagggcatcaa
aagagccagtacgggtactcgggttacgggagcgcaggatacactaacccgagccccggt
cagaacaaatgcgcaccgactgcgtccgccaacagcgctggaggttttgcgcgcttcccg
ggacacaatcagcatccctcaggctcaacacccaccctcaaccagcttctcacctccccc
ggtcctatgatgagatactacgagtacagcggctccaaagatcctggtcagcagtacggt
ggtacaggacatggctggccgggacagagagcgcatcccgggccaaacagcgcacagagt
gccaaccgaaaccaggtgggttccatggacttcatgggaatgaagcgctcgcagatatac
ggaatgagcagcagtccgtactctcagcagcagcagggcgttgcttacccgggccagcct
tatggatctccttctacacacagatacccaatgagcatgcagggcagaggacaaatgagc
atgggtacaatgccatatcctcaacaacaggtccctgctcattttaaccagcagggtatg
ggaggatacggtcctcagactcagtctgggtactacagccagtcccagcagccacagcag
caacagcagcagcagcagcaggttgtgactcctacccaggctccttattctcagccccac
actgctgcacagcaggaaacacaggagagctacggaaacagaacccagcctgctgggaat
gctgggaaacccaaccacgatgagatgggcttgatccagcagaaccgacctgccagcctg
ccggacctgtcaggctccattgatgacctacccatgggaacggaggcagcgctcagctca
gcagtcagtgcaccgggttcctccagcagtcaggaggaccaaagtaatcagaaccagtct
ccattctcacctcacacctctcctcatgtttccaatatgcgcactggtccatcacctcca
cccacagcctcccccagtcctgccagctccaaccagatttcccccactaacggcccaggg
tctcagctggcaccacagacccctgggaacatatcagactccagctctcactccagcttg
aatcaggatagaggatttatacggaggagccagaatcagtatggtcctcagcagtctgga
ccgcccatgtctcctcacctttcctctcgaaaccagatgcagcagggcatgagtgtgtat
cagcagaacaactctactggctcctacggacctcctggtggtcaatatggtcctcaaggt
aactactcgagacttcctgcctacggagtgatgaacagcactaactgcagtggtttgggg
cctggaatgaacaacagcttagccataaacattagcagccctgtacatgggcagggaccg
gggcagtcagtgtccatgggacgccttcaaggagctggtggtcgagtctacacgggtggt
gggaacagcatggctcccacttctcccagcatgcctcagtctgctggtccaggaatgggg
ccccctgcaggaaatgtgaaccgtaaagctcaagatggtgcaatacagctgacaggaagc
tctgtcctggggaggcagggtggttactgtggaatgatgggcaccagcacttcctacagc
cagtcagtgggaaatgccaccatgataatgtcaccacagagctccagctccaacacatca
cctccaggcttgatgggagacagtggagacatcctgctgccttcagactctaagcaaaca
tctagcagtaaagaggaagtactttctgcttctgatcctcctaaacccataaaggatggt
tccagctctcagtgtggttcggagccccctactccctcagctctgacccccagtcctgcc
agcctctcctcttaccacggggatgacagtgacagccttagcagtccaccatggcccaaa
actccctccagtcctaagaccatgaatgagaagatccctcggctctatgagatgggaggc
gagccagagagaaagaactgggtggatcgttacctgtccttcatggaggacagagggacg
cctgttcctcaccttcccattgtcggcaagaaggtgttggatctatgcaagttctacatg
gctgtcaaggagctggggggcttggccatggtgaacaagaataagaagtggcgtgagctc
tcctccatgctgggtttcggctcctccagcagctccgctagttctttaaagaaacactac
atccagttcctgttcacctatgagtgtaaggtggagagaggagaggaaccaccagtcaac
ccctgccctgctgccgacaccaagaaacaaagcaagattgaacctccttctcctgccaac
tcaggctctctgcagggccctcagacacctcagtcaacaggaagcagctccatgcctgag
atgccctgtgagctgaaaccacccacaccagccaccacaccacaaggacacatcaacaat
gtgcagagcaacagcaataattcaataagtgttcaggacccgttctcagatggcattgat
ccggccttccagaagaggaacatgctgaactctggaggcccttatcaatcctccatgaac
cccatggactccatgatgcggatgcagtatgaaaataaggaccattttgcaggaatgagg
aaggctgtaggtgcagagtcatgtatgccaggtcagatgcctcctgctggtatgcaagat
atttatggcagaagtccctccggtggtactttggctggactgggcatgggtcagcgatct
cagtatccatatggacaaggatatgatcgcaggtcagatcatatgatggggctggatgga
aatctgggtccccatgggaatcagggcaacatgagccatgccaacagtgatggtagcatg
tgcgcctccaacagataccctaatcaacaaaggcatgagggatatggacaacagtatcct
gctatgccttatacagtccatccttcagggatgtacccccaacaacagggctacaagcga
cctctcgatgggatgtatagcccccctgctaagaggcatgaaggggaggtttatggcatg
cagtacggaggcccgcagactgacatgtttggccagtacggagggaattacccagagcgc
cggaccatgccagctcagtttccatactcatacagccgagatcgactgcagaacaccagc
caggggcctcagcatcatcctgtccagcacaacatgatgagcactgggcattctgtgtct
acaggagatgggccaacacacatgtggccaacaaggacagacatgccctatccctaccct
aacagacatgggacaccaagtcaaactcctccttacccaggtatggggcgtttggatgac
atggacggactcagaatggacagtcattggcctgggcatcagcgccaatctccttacatt
tccacccactctaattctatgcccactatgaattcaaggcaacctccgtcctcctaccca
tcttcaaaccacatctcctgtgagccaatcccggggtcttatcaacgctctatagaagca
catattccccctaataagatgggctttttgcagtctatgaaaatgcacaagccagtaatg
cccatgccagggggttcgagtggaggaatatcaggccaaatgccacccaacatgaggaaa
gactatccactggggtgtgtggaagggacccagcctcacctgaaacctcggcgtaaactg
aattcaaaagacactggaaccccggaggcctggcgggtaatgatgtctctcaagtcaggt
ttgctggcggaaagcacatgggcgctggacaccattaacattctcttgtatgatgacagc
actgttgcttcctttaacctggcacagttgcctggatttcttgagctcatcgttgagtat
ctgagaagatgtttgattgagatctttggaatcctggaggaatacgaattgggcatcatc
agcgagaagagtccagctgtggatgaaaaggaaaaacacttgattacatcagagatacct
tgtgagccagagcccagtcaggaaacccctaaaatggaggatcaaaatttagacggagag
gtagaaaaaagtcaggatggcaaccaggagaaagagattttgacgaagacagatgaggag
gatgatcagaaagcgaaggatattatggagcctgttggaggccagtcgtctgtagcacgg
gagccaagacccaaacaagccagcaaatacgataagcttcctgtgaagattgttcccaaa
aacgaattaatcacagacatttcggatgagcttggctacgtacagagtttcactagcggg
ctacttcactggaaagcaggtggtggggacctgacaagtcacatccagacctgctttgag
ggtagtactgagtatgggactaagactgtgccaaacaagcaagacggcagtggtttaaaa
tcagaggttgataattccagggttgcaactatagatgacgtgttgccaccaagactgaga
gctctctctgaggaagaagacttgttaagctcctcgagtgatggcttgtgttcctttcga
ctttttgagaaacagaaagggttcgttttattagaggatgaaccatgttgtcccagtgag
tcttctctgtgcaccacagccagttggcaggatgctttggccagccgctgcatatgtgtc
tccaacataattcgcagtctgtccttcataccaggaaatgataccgagttgtccaagcac
ccagctctgattttgatacttggacgattacttctgttgcaccacgagcacccagaaaga
aggagaaattacccaagctgtgataaagaagagatccgtgaggataaggagggcttgtca
ggcagccaggatgagtggtggtgggagtgtcttgtagcactgagggagaacaccttggtt
actttggccaacattgctggtcagctggacctttcagtctatccagaaagcatctgcctt
ccagtcctggacggcctgctccactggatggtgtgtccttcagctgaagcccaggatcca
tttccatcagcaggtccgcattcccagctcagccccagacgcctggtactggaatgtctc
tccaagcttagcattcaggacggcaacgtcgacttgatcctggccacgccgcctctcaac
cgtcaggagaagttttatgctaagctggtgagccaggtcagagagcgcaagctgcaagtt
ttccgtgagatggctgtggctgttctgtccaacctggccagaggggatccttcagcagca
cgtgccatcgccattcagaaaaacagtgttggaaaccttgtaggcttcctagaggatggc
attaccatgactcagtatcaccaaaatccacacagcttgttacacatgggtcatcctccc
atggagcagcccagcgtgagcatgctgtgccgagctgccaaagcactgctggaactggcc
aaggtggaggagaaccgctctgagtttttactgtatgaaagtagactgctggatgtcgct
gtatccaccgtgcttaactcaagcatagtgggaatcgtctgtgaagtgctcttttatctc
ggcaagtcatga
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integrated database retrieval system
