Trichomycterus rosablanca: 134325040
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Entry
134325040 CDS
T09921
Symbol
atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn04136
Autophagy - other
trn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134325040 (atg2b)
04136 Autophagy - other
134325040 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134325040 (atg2b)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134325040 (atg2b)
Membrane trafficking [BR:
trn04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
134325040 (atg2b)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134325040 (atg2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
134325040
NCBI-ProteinID:
XP_062863123
LinkDB
All DBs
Position
13:17454346..17477338
Genome browser
AA seq
2076 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSVDLYQGTGSLAQVPLDKWSLNEVL
ESVDAPLEVTEGFIQTISLTVPWASLLQDNCALEVKGLEIVSRPRPRMTSGMEPMYWSSF
MTSSMQLAKECLSQRLTDDLGENFQPLEGLEKFAETIETVLRRVKVTFLNTVFKIEHIPE
NSKTGIVLEIRIKRMVYCDEAAEEGSSMNVHQPTTFAHKNLTLEGVSVFWNEFSEASRAS
MKSSPTQSETEPKLSPSWNPKIICEPHPQFTEPVCTSTQFEPVQVGCLSGKMELSLVLKQ
NEAMPGAKLDIDGQIDSLIMLLSPRQVHLLLDMFGVFSSSAVQKWSGLAKDRKSRPMQQE
DEYRLHMELNRCLKKEPMSACTEQDLFDSKIDRTVSSRAEDVFFSMADMDMSHSLSSLPP
LGDPPTVDLDLSLNSNYSTSLGESPSGNATAVWEEYLDMPKQKEKETPSFSRDSQLTHKL
LRQTSHSSKGHCDESRPELVFRLTVGNICLSVLHIDPLPPPDSALSPLAPMASEFFRMMT
ADQLYVRGFLQSRAVFDQACPHDHLRFIGEGLRVTYEHCQGSSMRTLCTDLSLRCMELLE
CLYPTEHCGMSAQSKVQYTELLTFDLASSGVSPNHSCLHLFYKLTERKGPQGGQVRLSAM
PRKAEFQVELGMAQAECDISIVDRLHSLLQPQKLGTTETMASHMYTSYNKHVSLHKAFAE
VFLEDSRSPTNCLVAVSVNAPKLVLVIRFPIPDLRSDQERGPWFKKSLQKEVLRLELEDL
ELKTEFTGDSSPEQTKMELTFKELSGTFQNDKDESAAKFLRVSHTMEENMTSSDSGKFDW
PRVVLKVNPKVVHSILERVTTEEEEEGAEENLQEEEEEEGAAHSLKDVCDFGKPEPSPFS
SRRVMYENEEMVIPGDVVEMTEFQEKTMSNSRYILELSFPNVQLSLPNKAFYEKLHNRIN
NDLLLWEPTAPSPVETVECMPYGVGLSVASQLISTYSKDSFSQFRSPGTEDEESGSEDET
LPYYTPDELSYRNIRRKKNKMQSRNSQSLFSVLLSVNHCLVALHTEAKQTDNSLLKNKHG
EFWMEVKNGVVFGVTQYEGYKDQHYVCFHTSTICLYHQGSVDGDVPVWDVKLPCRTRPHW
LEPVVYVCESPTEKASPSEGLNLEPHSMLSLALKISSQSTERNVKEFLIAVGVRGATLQH
RVVPSSLGWYDQLVDFLNVTDEPVLGYTPPSYLTTFHLHLWSCSLDYRPLYLPIRSLLTV
ETFSISSSVSLDHSSSTLRIILDEAALFLSDKSNAVSVNLARDYVQVVDMGTLELRITAV
KPGADGERMEPRFELRCSSDVIHIRTCSDSCAALMNLIQYIASYGDLLPPVRLESKGNSA
KQRAKLEVVSQPVSHAPLLPEAEQQMLQDLMSDAMEETDSMQSHTLQTNGLHNDQISDHD
PPHSDLFLFPDESGSVTQDPNPTYPMLHSPLISPPVCSTHHESDDFCILDSPGLRALERD
EEPVVQKYTTDPIVVLENHFSEPMEGSSSSRGPLNLPVPEVRYLVKEISVVWHLYGGKDF
SSGLLSSSPARSRGCTPYSSPSQTPVRQARRGSRSGGGWGRNLDVLMEIQLSKVRFQHEI
YPVVGPEAKTLAEQPVSRQVFSVQDLEIRDRLASSMMNKFLYLYSSKELPRKAHSNMLTV
RALHMRPEAGQAPQECCLRVSLMPLRLNVDQDALFFLKDFFTSLAADVELFSPPEQEALC
VSMKTTPGPEVACTFSKYSGGAGQDPAPIISVPTQTRSTQNGLEASSGEQQPETATTSFT
DQPIFFREFRFTSEVPIRLDYHGKHMAMEQGTLAGIIIGLTQLNCSELKLHRLCYRQGLL
GVDKLFSYALNEWLNDIKKNQLPGLLGGVGPIHSLVQLVQGFRDLVWMPIEQYRKDGRIV
RGFQRGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPVPDERECKKVKRYSHYRL
THQPVDLREGVANAYNVVREGITDTALTIYGTATREHEQRGMTGAVGGVLRQLPPAVVKP
LIVATEATSNVLGGMRNQIHPDARQEESQKWRLGEE
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggcctttttcagagtctattaagaagcgggcctgcaggtatctgctgcacaga
tacttgggtaatttcctgcaagaaaaactaagtttggaccagcttagtgtggacctttac
caaggcacaggttcgcttgcacaagtgccactggacaagtggtcactaaatgaagtcctg
gagtcagtggatgctccgcttgaagtaaccgagggctttatccagactatttccctcact
gtaccatgggcatctttgcttcaggacaactgtgctctggaagttaaaggcttggaaatt
gtttccaggccaaggcctcgaatgacatctgggatggagcctatgtactggtcgagcttc
atgaccagcagtatgcagctagcaaaggaatgtcttagccagagactcactgatgaccta
ggagagaacttccagcctctggagggtctagagaagtttgcggagacaattgaaacagtt
ttgagaagagtcaaggtcacatttttgaatacagtcttcaagatagaacatattccagaa
aattccaaaactggaattgtccttgaaattagaataaaaagaatggtttactgtgatgag
gctgctgaagaaggctcaagcatgaatgttcaccaacccaccacatttgctcacaaaaat
ctgacattggagggtgtcagtgttttctggaatgagttttcagaggcatcccgtgccagc
atgaaatcttcccccactcaatcagagactgagcctaagctgtcccctagctggaatcca
aaaatcatctgtgagcctcacccgcagttcacagagcctgtgtgtaccagcacacaattt
gaacctgtgcaggtgggctgcctaagtggcaaaatggaactgtccctggtactgaagcag
aatgaagccatgcctggagccaagttggacattgatggacagatcgattcattgatcatg
ctgctctcgccaaggcaagtccatctgctgttggatatgtttggagtcttttctagctca
gcagtccagaagtggtctggcttggccaaggatagaaaaagtcggcccatgcagcaggag
gatgaataccgtcttcacatggagctcaaccgctgcttaaaaaaggagcccatgagtgct
tgcactgaacaggacctgtttgacagcaagattgacagaacagtatcaagtagagcagaa
gatgtatttttctccatggctgacatggacatgtcacacagtctttcatctcttcctccc
cttggtgacccgcccactgtagacctggacctgtctcttaacagcaattactccacctcc
ctgggagagtcaccctctggcaatgcaactgctgtgtgggaggagtacttggacatgcct
aaacagaaggagaaagagacaccttcattctccagagactctcagctaacacataagctg
ctcagacagacctctcattcatctaagggtcactgtgatgagtccaggcctgagctggtt
tttaggttgacggtgggcaatatctgcctttctgtacttcacatcgatcctctcccgcca
ccagactctgctcttagcccccttgcaccaatggcttcagaattttttcgcatgatgacg
gctgatcagctttatgttagagggtttctccagtctcgagctgtttttgaccaggcctgc
ccacatgatcatctcagattcataggtgaggggttgagggtgacatatgagcattgccag
ggctctagtatgcgcactctttgtacagatctgtccctaaggtgtatggagttactagaa
tgcctctaccccactgagcactgcggcatgagtgcgcagagtaaagtacagtacactgag
ctcttgacatttgatttggcttccagtggtgtgtctcccaaccatagttgtcttcatctg
ttctacaagcttacagagcgcaaaggcccacagggtgggcaggtgcgtctgagtgctatg
ccccgtaaagcggagtttcaggtggagctcggtatggctcaggcagagtgtgacatcagc
attgtggaccggctccactccttgctccagccccagaaactgggaaccactgaaaccatg
gcctcccacatgtacacctcctacaataagcatgttagccttcacaaggcctttgcagag
gtgtttcttgaagatagccgtagcccaacaaactgcctggtagccgtgtcggtgaatgct
cctaagctggtgctggtgatccggtttcccatcccagacctgcgctcggaccaggagagg
ggcccctggtttaaaaaatctctacaaaaagaggtgctgcgcttggagctggaggacctg
gagctgaaaactgagttcactggagacagctcacctgagcaaaccaagatggagctcacc
tttaaagagctcagtggtacattccagaatgacaaggatgagtctgctgccaagttctta
cgtgtgtcgcacacaatggaggagaacatgacctcttccgacagcggcaagtttgattgg
cccagagtggtccttaaggtaaaccccaaggttgtgcactccatcttggagcgggttacc
actgaagaggaagaggaaggcgctgaagaaaatttacaggaggaagaggaggaggaagga
gctgcccactccttaaaagatgtgtgtgattttggcaaacctgagccctcgcctttctcc
tctcgacgtgttatgtatgaaaatgaagagatggtcatcccaggagacgtagtggagatg
acagaattccaggagaaaaccatgagcaactctcgttacattcttgaactgtctttcccc
aatgtgcaactatctctacccaataaggccttttatgagaaactccacaacaggataaac
aatgacctgctgttgtgggaacccactgcaccatcaccagtagagacggtggagtgcatg
ccgtatggagttggcctttctgttgccagccagctcatcagcacctacagcaaggacagc
tttagccaatttagatctcctggcactgaggatgaagagagtggatcagaagatgaaacg
ctcccatactacactcctgatgaactgagctatagaaacataaggaggaagaaaaataag
atgcagtctaggaactcacagagtctgttctctgtcctcctgtctgtcaatcattgtctg
gtagcattgcatacagaggctaagcaaactgataactctctgctgaaaaataagcatggg
gagttctggatggaggtgaagaatggagttgtgtttggtgtaacacagtatgaaggatat
aaagaccagcactatgtctgctttcacacctccaccatttgtctctatcatcaaggatca
gtagatggtgatgtcccagtgtgggatgtgaagctgccgtgcaggacgcgcccgcattgg
ttggaaccagtggtgtatgtatgcgagtctccgaccgagaaagcatctccctcagagggg
ctgaatttggagcctcacagtatgctgtccctcgccctgaagatttcctctcagagcacg
gagcgcaatgtaaaggagtttctgattgcggttggagtaaggggagccacattgcagcac
agagttgtgccctcctcactgggctggtatgaccagttggttgactttttgaacgtgacc
gatgagcctgtgcttgggtacacacctccatcctatctaactacatttcatttgcatctg
tggagctgctctctggactacaggccattgtatttacctataaggtctctgctcacagta
gagacgtttagtatttccagcagtgtgtctctggatcactcatcctccactctcagaatc
attcttgatgaggcagcactgtttttgtctgacaagagcaatgctgtgtctgtcaacctg
gcccgagattatgtgcaggtggtggatatgggaactttggagctcaggatcacagcagtc
aaacctggtgcagatggagaaaggatggagccacggttcgagctgcgttgttcgagtgat
gtcattcacattcggacttgctcagactcgtgcgctgctctcatgaaccttatccagtac
atcgctagctatggagatctgctgcctccagtcagacttgagagcaaaggcaacagcgcc
aagcaaagggcaaagctggaggtagtgagccaaccggtttcccacgctccattgctacct
gaagctgagcagcagatgctgcaggacctgatgagtgatgccatggaagagacagactcc
atgcagagccacaccctgcaaaccaatggtctccataacgatcagataagcgatcatgac
ccaccacactctgacctcttccttttcccggacgagagcggctcagtgacccaggatcct
aaccccacctatccaatgctgcattcgcccctaatttctcctcctgtttgtagcacgcac
catgaatctgatgacttctgcattctggattctccaggcttaagagcattggagagggat
gaagaaccagtggtacaaaagtataccacagatcccattgtagtgctggaaaaccatttt
agtgaaccaatggagggcagcagttccagcagaggcccactgaaccttcctgtgcctgaa
gttaggtacctggttaaagagatctctgtggtctggcacctttatggaggaaaggacttt
agcagcggtctgctctcatcctctccggctcgcagtcgcgggtgcactccttacagctcc
ccctctcaaacgcctgtaagacaggcacgcagaggctcccgctctggaggaggttggggc
aggaatttagacgtgttaatggagatccaactcagcaaggtacgatttcaacatgagatt
taccctgtggtgggcccagaagctaaaacactggcagagcagccagtatccagacaagtg
ttctcagtgcaggatctagagatacgagacagactggcctcatccatgatgaacaagttt
ctgtacctgtactctagcaaagagctgcctaggaaagcccactccaacatgctgacagtc
cgagcattgcatatgcgcccagaggcgggacaggctccacaggagtgctgtctgcgtgtc
tccctaatgccactgcgcctcaacgtcgaccaggatgctctgttctttctaaaggatttc
tttaccagtctggctgcagacgtagagctcttttcaccaccagagcaggaagcactgtgt
gtatccatgaaaacaactccaggaccagaggtagcatgcacattctctaaatacagcgga
ggagcaggtcaggaccctgcaccaattatctctgttcccacccaaactcgctctactcag
aacggtttagaagcctcgagtggtgaacaacaacctgagactgccaccacatcattcaca
gaccagcctatctttttcagagagttcaggtttacttctgaggtgccaatccggctagat
taccatgggaaacacatggccatggagcagggtacacttgcaggtataataattggactg
acccaactaaactgctctgaactcaagttgcaccgactctgctacagacaagggctgctg
ggtgtggacaagctcttttcttatgctcttaatgaatggctcaatgatataaagaagaac
cagcttccagggctgcttggtggagtgggacctatacattccctagtgcaactggtccag
ggctttagagatctagtgtggatgcctatagagcaatatcggaaggatgggaggattgtg
cggggctttcagcggggtactgcctcattcgggacctcgactgcaatggcagccctggag
cttaccaatcgtatggtgcgaacaatccaggcagctgctgagacagcctatgacatggtg
tctccagtgccagatgaaagagaatgcaaaaaagttaaacggtactcacactatcgactt
actcatcagcctgtggacctcagagaaggagtagccaatgcctacaatgtagtaagggag
ggcatcacggacacggctttgacaatttacggtacagccacccgtgagcatgagcaaaga
gggatgactggtgcagtgggcggagtcttacgccagcttccacctgctgttgttaaacct
ctgatcgttgcaacggaagccacctccaatgttttgggaggaatgaggaaccagattcac
ccagacgctcgccaggaggaatcgcagaagtggcgtcttggagaagaataa
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integrated database retrieval system
