Trichomycterus rosablanca: 134325304
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Entry
134325304 CDS
T09921
Symbol
col10a1a
Name
(RefSeq) collagen, type X, alpha 1a
KO
K19479
collagen type X alpha
Organism
trn
Trichomycterus rosablanca
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
134325304
NCBI-ProteinID:
XP_062863522
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Position
13:complement(1568817..1574403)
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AA seq
652 aa
AA seq
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MDLRVASILLLLVALAAGHGKRYVVKKVMEAPYAVKGHVVSVAGEPGSPGEPGPEGPPGP
PGPPGENGEGLQGPEGPPGPPGPAGYSAPGKPGTPGGPGKSGAPGAPGLKGDGGASGPQG
PRGAPGPSGSPGPAGISAPGKPGPAGMPGGMGPRGEPGIKGHPGIPGQPGQNGERGIGFH
GPQGERGETGPMGPVGAPGEPGVGKPGKPGYPGEPGKGGASGRDGQPGPMGPSGPKGHTG
APGIGMPGKPGENGAPGQPGSAGFKGPQGAAGAPGAPGSPGYGKPGAAGLKGETGPAGSP
GAAGPKGEPGSRGPTGYTGATGPAGPAGPQGPRGFPGERGAAGEKGESGPVGPQGFKGHK
GDQGAQGGDGKPGYPGATGQPGSRGPTGATGPKGETGETGATGAPGATGPVGPKGHTGHT
GPAGETGSAGAPGARGPAGPSGAPGAPGHKGHPGLPGSPGPAGLAAKGVAGPQGPHGLPG
ADGAPGETGPSGPPGPPGPPGEVVFAKAEETFKGEPSFIKTPMSAFTALTTSPYPPAGSP
IKFEQIVYNAENHYDPESGVFTCQVPGVYYFSYSMHVNGANALVALYKNEEPIMFTYDEY
NKGFLDQMSGSAVLQLNEQDTVYLQIPDDEANGIFAADNVHCSFSGFLIAST
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggatctacgagtagcgagtattcttcttctgctggtggccctggccgccggccatggc
aaaagatacgtggtgaagaaagtcatggaggctccgtacgccgtgaaaggtcatgtggtt
tctgtagctggagaaccaggttccccaggtgagccaggcccagagggaccccctggacct
cctggccctcctggagagaacggtgaaggactgcaaggaccagagggacctcctggacca
cccggacctgccggctactctgcacctggaaagccaggtactccaggtggaccaggcaaa
tcaggtgcacctggagcacctggacttaaaggagatgggggcgcatctggtcctcaggga
cctaggggtgcacctgggccttctggcagccccgggcctgctggtatttccgctcccggc
aaacctggaccagcaggtatgcccggaggtatgggaccaaggggagagccaggtattaag
ggacatccaggtattcctggtcagccaggacagaatggagagagaggtattggttttcac
gggcctcaaggtgagaggggagaaactggacctatgggacctgtaggagcacccggtgag
cctggtgttggtaaacccggtaagcctggatacccaggtgagccaggtaagggaggtgca
tctggccgtgatggacaaccaggtcctatgggtcccagtggaccaaaaggccatactggt
gcccctggaattggaatgccaggtaaaccaggtgaaaatggtgccccaggtcagccaggt
tctgccggtttcaaaggtccacagggagcagctggagcacctggtgctcctggtagccca
ggctatggtaagccaggtgctgctggtcttaagggtgagacaggcccagcgggtagccca
ggtgcagcagggccaaaaggtgagccaggttcaaggggacctacaggatatacaggagca
actggtcctgcaggcccagctggccctcagggtccaagaggtttcccaggtgagagggga
gctgcaggtgaaaagggggaatcaggtccagtgggacctcagggctttaagggacataag
ggagatcagggtgcacaaggtggtgatggcaagccaggctacccaggtgcaacaggccaa
ccaggttcaagaggaccaactggtgctacaggtcccaaaggagaaactggcgaaacaggt
gccactggtgctccaggagcaaccggacctgttggccccaagggtcacacaggacacact
ggaccagctggtgagacagggtctgcaggtgccccaggggcaagaggaccagctggtcct
tctggtgcaccaggtgcacctgggcataagggacaccctggtcttcctgggtcacctggc
ccagctggtcttgctgctaagggagttgctggacctcaaggtcctcatggacttcccggt
gctgatggtgctcccggtgaaactggcccatccggtcccccaggcccacccggtcctccc
ggtgaggttgtttttgcaaaggcagaggagacattcaagggggagccatctttcatcaag
accccaatgtctgcctttaccgccctaactacatcaccctaccccccagctggtagccct
attaagtttgagcagattgtttacaatgcggagaatcactacgatcccgagtccggcgtc
ttcacctgccaggttcctggcgtctattacttctcgtacagcatgcacgtgaacggggct
aacgccttggtggcactctataagaacgaggagccgattatgttcacctacgatgagtac
aacaagggctttctggaccagatgtccggcagcgctgtccttcagctcaacgagcaggac
accgtttaccttcagatccccgatgacgaggctaacggcatctttgccgccgataacgtc
cactgctccttcagtggcttcctgatcgcctcaacgtga
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