Trichomycterus rosablanca: 134325451
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Entry
134325451 CDS
T09921
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134325451 (msh4)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Meiosis-specific proteins
Others
134325451 (msh4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND_NTPase5
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
134325451
NCBI-ProteinID:
XP_062863717
LinkDB
All DBs
Position
13:17478273..17493001
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AA seq
936 aa
AA seq
DB search
MLRSSTEEVTVGYSSDGGTCSWSSTDQQYSGAASRLQRDVAVSLSSLPSTNRSDCISTGS
APSSTSANANATTETAAVQPYQTPAVTGNTRSQCYNGVNRTSSSSSWTSGVYRSLCRSSS
TPHLRRTPGSASRGPALLREINMTTSSSATVCHAASVIVAVVEGRGLARGEIGMASINMK
SPELVLSQFADTGTYAKVITKLHILMPLEILMPDTACDKGQATKLYNLVTENFPSVAFSA
IQRKYFNERKGLEYIQQLSAPEFNTVLMDVQTKYYCLAAAAALLKYFEFIQNSVYAPKSL
KVSFTGSEQTAMIDTLSASHLELVINNRDHRSEHTLLGVLNYTKTPGGERRLRANILEPL
LDVDTINTRLDTIQELLQDEELFYGLKSAIAHFLDIDQLLSALVQLSKQETVEVAEAKIM
HVIQLKHSLELIAPLKMALKEAKTALLKAYYTSLEDSRFVSILDHIKTVINDDTTYMKGS
LNLRTQKCYAVRPNVNEFLDIARRAYTEVVDDIAGLVNQLGEKYGLPLRTSFNSARGFFI
QMRLEGVGLPDGQLPGEFIKVTRQKNNYSFTTLDLMKMNDRCDEALKEIFHMSYMVVCRL
LNGVYEQIHCLYKLSDAVSMLDMLLSLANVCTISDYVRPEFTDTMAIKQGRHPILERIGG
QQPIPNNSYISEGSNFVIITGPNMSGKSTYLKQVALCQIMAQIGSFVPAEYASFRVADQI
FTRIGVDDDFETNSSTFMVEMREVAYIIHNASERSLIIIDELGRGTSAEEGIGICHSVCE
FLINLKAFTLFATHFLELCNLETLYPNVENHHMKVQHMRDSKNSTDSVVYTYLLTRGFFE
ERNYGIKAAEITSFPPSIIQEAKSIAAKVSQKLWAKHNSDPTTLRQRAVYHLATRLLQTA
RNSRLDPDSLRLYLKGLKKHYEAELKEGLQCITMEQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtagtagcactgaggaggtaacggtcggttatagttcagacggcggaacatgc
agctggtcctccacagaccagcagtacagcggagcggcttctcgtctacagagagatgta
gcagtgagcctgtcatccctgccctccacaaaccgatcagactgtatcagcaccggctcc
gctccctcatccacctccgctaatgctaatgctaccactgaaactgctgctgttcagccg
taccaaacacctgctgtaacaggtaacacaaggtcccagtgttacaatggtgtgaataga
acaagctctagttcttcatggaccagtggtgtttatcgctcactatgccggagttcaagc
actccacatctcaggagaactccaggctcagcctctcgtggaccagcacttctaagagaa
attaacatgacaacttcctcatctgcaactgtgtgccatgctgcatctgtgatcgtggct
gtggttgagggtcgtgggttggccagaggagagattggcatggccagtatcaacatgaaa
tcccctgaattggtcctgtcccagtttgcagacactggaacttatgccaaggtaattacc
aaacttcatatcctgatgccacttgagattctgatgccagacactgcttgtgacaaaggc
caagcaaccaaactctacaacctcgtcactgagaactttccgtctgtagcattcagtgct
attcagaggaagtactttaatgaaaggaaaggattggaatacatccagcagctttctgct
cctgagttcaacactgttctaatggatgtacaaaccaaatactactgtctggcagctgca
gctgctcttcttaagtactttgagttcatccagaactctgtctatgctcccaagtctctg
aaagtgagcttcacaggcagtgagcaaacagctatgattgacactttgtcagccagtcac
ctggagctagtgattaacaacagggaccacaggagtgaacacactctgcttggtgtcctg
aactacaccaaaacaccaggtggtgagaggaggcttcgcgctaacattctggagcctctg
ttggatgttgacactattaatacacgactggacaccatacaggaactgttgcaggatgag
gaactcttctatggtctcaagagtgcaattgcacacttcttagatatagatcagctgctt
tctgctttggtgcagctctctaagcaagagacggtggaagtggctgaagcgaaaataatg
catgtcattcagctaaaacactctctagagctgattgcaccacttaagatggcactaaag
gaagctaaaacagctttgctaaaagcatattacacttcactagaagacagcaggtttgtc
agcattttggatcacatcaaaacagtgattaatgatgacaccacctacatgaaaggcagt
ttaaacctgcgcactcagaagtgctatgctgtgcgtcctaatgtcaatgaattcctagat
attgcaagacgagcctacactgaggtcgtggatgacatagcaggattagtaaatcagctc
ggagagaagtacggcctgcctctgcgcactagtttcaattctgctcgtggtttctttatc
caaatgaggctggagggtgttggcttgcctgatggtcagcttccaggagagtttattaaa
gtaactagacagaaaaacaattacagcttcaccactttagacctgatgaagatgaatgat
cgctgtgatgaagccctgaaggagatctttcacatgtcttacatggtggtgtgccgttta
ctgaatggagtatatgaacagattcactgtttgtataagctgtctgatgctgtgtccatg
ctagacatgctgctctccctggccaatgtttgcacaatctctgattatgtgcgccctgag
tttactgacactatggcaataaaacaaggtcgccatcctatcctggagcgcattggtggc
cagcagcctatccctaacaacagctatatctcagagggaagcaactttgtaataatcaca
gggcccaacatgagtggcaaatccacctaccttaaacaggttgccctctgccaaattatg
gctcagataggatcatttgtgcctgctgagtatgcttccttccgagtggctgatcagata
ttcaccagaattggagtagacgatgattttgagaccaactcctcaacttttatggttgag
atgagggaggtggcatacataatacataatgcaagtgagagatcacttatcattattgat
gagctgggacgtggcactagtgctgaagagggtattggcatatgccactcagtttgtgag
tttctcatcaatctgaaggcatttactctgtttgccacccactttctggagctgtgtaat
ttggagacgctttatcccaatgtggagaaccatcacatgaaggttcagcacatgcgtgac
agtaaaaacagcacagatagtgtggtgtacacataccttctgacccgaggcttttttgag
gaacgcaactatggtataaaagcagcagagattacatcatttccaccatccatcatccag
gaggccaagtctattgcagcaaaagtcagccaaaagttatgggccaagcataacagtgat
ccaactaccctgcgacaaagagcagtgtatcatcttgccaccagattgttgcagacggct
cgaaactccaggctggatccggatagtttgcggctctatctgaagggtttaaaaaaacac
tatgaggctgagttaaaggaaggtttacagtgcataaccatggagcagtaa
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