KEGG   Trichomycterus rosablanca: 134325492
Entry
134325492         CDS       T09921                                 
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
trn  Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:trn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:trn03036]
    134325492 (wdhd1)
Chromosome and associated proteins [BR:trn03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    134325492 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Beta-prop_THOC3 Ctf4_C Beta-prop_WDR5 WD40 HMG_WDHD1 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd eIF2A HMG_box Beta-prop_WDR35_TULP_N WD40_Gbeta Beta-prop_TEP1_2nd WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Tricorn_2nd Ge1_WD40 Beta-prop_IP5PC_F NBCH_WD40 HMG_box_2
Other DBs
NCBI-GeneID: 134325492
NCBI-ProteinID: XP_062863778
LinkDB
Position
13:complement(1370196..1393194)
AA seq 1102 aa
MPCERKPMRYGHSEGHTDVCFDEHGKFIVTCGSDGDVRIWESLDDDDPKSISVGEKVHSL
ALRGEKLVTAVSNNTVQIHTFPDGDPDGILTRFTTNANHVAFNFSGTRVAAGSSDFMIKV
IEVADSSQQKTLRGHDAPVLSVTFDPTDQFLASSSCDGSVAVWSIEEQTQVVSWKVLQRS
SDISNAKSLCRLAWQPHSGKLLAVPVDTTVQLYERDSWTHVGTLSDDLLTQAVNVVVWSP
CGRFLAAGAVGGLLSVWDVEAKLCIERQKHEKGYTVCGMAWHPSGAQIAYTDTEGCLSLL
DEVCAASSTKSTPSTKNTKDAASKNRDGYDDLFDEDDDGGLLDECVSADGEDEDDLMPAT
GKPRNRLNVLDDDENSRDTASVRADHLAEDDAQSDVARPSAPAAAPRPVYEGPVPTAPQR
AFQSGSTPTHLMHRFMVWNSVGIVRSYNDEQDNAIDVEFHDSAVHHAMHLSNTLEHGMAD
LSQEAVLLAGEGTDELASKLQCLHFSSWDTSKEWMVDLPKGEDVRALCLGRGWAAAGTSA
MLVRLFSIGGVQREVFSLPGPVVCMAGHGEQLLVAYHRGTGFDGDQALGVQLLQLGRRRK
QIVRGEPLPLSRRSHLTWLGFSAEGTPSCADSQGTVRMLNRSLGNTWTPVCDTSESCKSK
SDRYWVVGIHEDPQQLRCIPCKGSVFPPTLPRPAVAVLPFKLPFCQTSTEKGQMEEQYWR
SVIFHNHFNFLSSSGYEVDEENRRQQEKEQQELLMKMFALSCKLEREFRCVELAEMMTQS
VVALAIRYASRSGRMLLAQRLNELALEKAGETREDAEPEEDPSYRTPAQDTGFRQASRAQ
RHSSSRAAQDDEEEEEDAGEEEDALEEPMEADEEAESKKPRLNPFSKGTKSPEKPSPKPV
SKDGRVNPFKVSGPVKQAASPSLQPRSVNVLDTMTASNRKLSAPAKAPVLKPLAPKPRSK
AQATLLQMSAKKGAAKKREEREAEKAEKPAAGDGVENTRPKTGFQMWMEENRKGILADHP
DLEETEIIKEAMSRFRTLSAEERLTWTERAKGSSGDAADPKKRKRDDGEDDGGRDETDES
SAKKKKAPGASAKLSAFAFNKS
NT seq 3309 nt   +upstreamnt  +downstreamnt
atgccctgtgaaaggaagccgatgcgctacggtcactctgagggtcacactgatgtctgc
ttcgacgagcacggcaagtttattgttacgtgcggaagtgacggagacgtgcgaatctgg
gaaagtttggatgacgacgatcccaaatccatcagcgtcggagagaaggttcattctcta
gctctgagaggagagaagctggtgaccgcggtgtccaacaacactgttcagatccacacg
tttcctgacggagatcctgatgggatcctcactcgcttcaccaccaacgccaaccacgtc
gccttcaacttcagcggcaccagagttgctgccgggtcgagtgacttcatgataaaggtg
atcgaagtggcggacagcagtcagcagaagactctgcgtggacatgatgcccctgttctc
agtgtaacctttgaccccactgatcagttccttgcctcgtcaagctgcgatggttcagtg
gcggtgtggtctatagaagaacagactcaagtagtgagctggaaggtgctgcagaggtcg
agtgatatcagcaatgccaagtctctgtgcagactagcatggcagccacattcaggaaag
ctgctggcagttccagtggacacgacagtacagctgtacgagcgcgactcctggactcac
gtcggtactctgtctgatgacctgctcacccaggccgtcaacgtggtggtctggtctccg
tgcggacggttcctggcagcgggagcggtcgggggactcctctcggtctgggatgttgaa
gccaagctgtgcatcgagagacaaaagcatgaaaaaggctacacggtgtgtggcatggct
tggcatccatccggggcacagatcgcttatacagacaccgagggctgcctgagtctgctg
gatgaagtgtgtgcagcctcctctactaagtccacgcccagcaccaagaacaccaaggat
gccgcgagtaagaaccgggacggctatgacgacctcttcgatgaagacgacgatggtggc
ttgctggatgaatgtgtatcggcagacggagaggacgaggacgatctcatgccagctacc
ggcaaaccacgcaacaggctgaacgtcctggacgatgatgagaactcccgggacacggct
tcggtgagggcggatcatttggccgaggacgacgcccagagcgacgtcgcgcgcccctcc
gcgccggccgccgcgcctcgtccggtctacgagggtcccgtgcccaccgcgccccagaga
gccttccagtcgggttccacccccacccacctaatgcaccgtttcatggtttggaactcg
gtgggtatcgtgcgcagttataacgacgagcaggacaacgcgatcgacgtggagttccat
gactccgccgtccatcatgccatgcacctctctaacacgctggagcacggcatggccgat
ctctcccaggaggccgttctgctggccggcgagggcacggacgaactcgccagtaagctg
cagtgcctgcacttctcgtcgtgggacaccagtaaggagtggatggtggacctgcccaag
ggcgaggacgtccgggcgctgtgcctcggtcggggctgggcggcggcgggtaccagtgcc
atgctggtgcgcctcttctctatcggcggagtgcagagagaggttttcagcctgccggga
cccgtcgtgtgtatggccggacacggcgagcagctgctcgtagcgtatcacagaggtact
ggctttgacggagatcaggccctgggggtgcagctgctgcagctggggcgcaggaggaag
cagatcgtccgcggtgagccgctccccctgtcccgcagatcccacctgacgtggctgggc
ttcagtgccgaggggacgccgagctgcgcggactcgcagggcacggtgcgcatgctgaat
cgctcgctgggaaacacgtggacccccgtgtgcgacaccagtgagagctgcaagagcaag
tccgatcgttactgggtggtcgggatccacgaggacccgcagcagctcagatgtatcccc
tgcaaaggatccgttttccccccgaccctccctcgcccggctgtagccgtcctgcccttc
aaactgcccttctgccagaccagcacggagaaaggacagatggaggagcagtactggcgc
tctgtgatcttccataaccactttaacttcctctcctcgagcggatacgaggtcgacgag
gagaatcggaggcagcaggagaaggagcagcaggagctcctgatgaagatgttcgcatta
tcctgcaagctggagcgcgagttccggtgcgtggagctggcggagatgatgacgcagagc
gtggtcgccctggccatccgctacgcctcgcgctccgggcgcatgcttctggcccagcgg
ctgaacgagctggcgctagagaaggccggcgagacgcgggaagacgccgagcccgaggag
gatccgtcctatcgcacgccagcgcaagacaccgggttcaggcaagccagcagagctcag
agacactcgagcagcagagcagcgcaggatgacgaggaggaggaggaggatgcaggagag
gaagaggacgcactggaagaaccgatggaagcagatgaagaagcagaaagcaaaaagcca
cgtttaaacccgttcagtaaaggcacaaaatcacctgagaaaccttcacctaaaccagtc
agtaaagacgggcgagtgaacccctttaaggtgagcggaccggtcaagcaggcggcttct
ccctcactgcagcccagatcggttaacgttctggacaccatgacggcatccaacagaaaa
ctctcggctccggctaaagctccggtactgaaacctctggcaccgaaaccgcgctccaag
gctcaggccactctgctgcagatgagcgctaagaaaggagcggctaagaaacgggaggag
agagaggctgagaaagctgagaaaccggccgctggggacggcgtggagaacaccagaccc
aagactggtttccagatgtggatggaggagaacaggaagggcattctcgctgaccatcct
gacctggaggagaccgagatcatcaaagaggccatgagccgcttccgtaccctctcggcc
gaggagagactgacgtggacggagagagcgaagggctcgagcggagacgccgccgacccc
aagaagcggaaacgggacgacggcgaggacgacggcgggcgggacgagacggacgagagc
agcgctaaaaagaaaaaagctccgggcgcgtcggctaagctctcggctttcgccttcaac
aagagttaa

DBGET integrated database retrieval system